Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_N02
(697 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82287-6|CAB05318.1| 312|Caenorhabditis elegans Hypothetical pr... 118 5e-27
Z80223-9|CAB02322.1| 312|Caenorhabditis elegans Hypothetical pr... 118 5e-27
Z82287-5|CAB05315.1| 328|Caenorhabditis elegans Hypothetical pr... 115 4e-26
AL110479-7|CAB54355.1| 288|Caenorhabditis elegans Hypothetical ... 36 0.037
Z99281-46|CAB54455.3| 795|Caenorhabditis elegans Hypothetical p... 31 0.60
U40028-2|AAY55874.1| 1200|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 27 9.7
>Z82287-6|CAB05318.1| 312|Caenorhabditis elegans Hypothetical
protein ZK550.6 protein.
Length = 312
Score = 118 bits (283), Expect = 5e-27
Identities = 62/160 (38%), Positives = 98/160 (61%), Gaps = 10/160 (6%)
Frame = +2
Query: 248 LSEEQKSFYWENGYLVIKELIDFTSLYSYKQRFLQICKGIVDSP--VMIVKEQALFEKNL 421
LS EQ+ FY +NGYL+I+ + L ++QRF IC+ V +P + ++K+ ++ +
Sbjct: 16 LSAEQRRFYEKNGYLLIRNCVPQYELNRFRQRFQDICEKKVKAPENMTVMKDISIAKSEF 75
Query: 422 KP-EEYINKLQEILYDDVFMTYGEHPRLLEVISQFIGD---DITAIHSMFINKPPG---- 577
K E+ I K+Q+ D V Y ++P +++V+ IG+ ++ A+H+M INKPP
Sbjct: 76 KDGEKAITKIQDFADDPVLFEYCKYPGVVDVVKDLIGNPKSNLMAMHTMLINKPPDNGKL 135
Query: 578 TARHPPHQDLFYFPIRPVDKIIGSXTAVDHVNKDNGCLYV 697
T+RHP HQDL YFP RP D I + TA++ + + NGCL V
Sbjct: 136 TSRHPMHQDLQYFPFRPADFICCAWTAMEKITRANGCLVV 175
>Z80223-9|CAB02322.1| 312|Caenorhabditis elegans Hypothetical
protein ZK550.6 protein.
Length = 312
Score = 118 bits (283), Expect = 5e-27
Identities = 62/160 (38%), Positives = 98/160 (61%), Gaps = 10/160 (6%)
Frame = +2
Query: 248 LSEEQKSFYWENGYLVIKELIDFTSLYSYKQRFLQICKGIVDSP--VMIVKEQALFEKNL 421
LS EQ+ FY +NGYL+I+ + L ++QRF IC+ V +P + ++K+ ++ +
Sbjct: 16 LSAEQRRFYEKNGYLLIRNCVPQYELNRFRQRFQDICEKKVKAPENMTVMKDISIAKSEF 75
Query: 422 KP-EEYINKLQEILYDDVFMTYGEHPRLLEVISQFIGD---DITAIHSMFINKPPG---- 577
K E+ I K+Q+ D V Y ++P +++V+ IG+ ++ A+H+M INKPP
Sbjct: 76 KDGEKAITKIQDFADDPVLFEYCKYPGVVDVVKDLIGNPKSNLMAMHTMLINKPPDNGKL 135
Query: 578 TARHPPHQDLFYFPIRPVDKIIGSXTAVDHVNKDNGCLYV 697
T+RHP HQDL YFP RP D I + TA++ + + NGCL V
Sbjct: 136 TSRHPMHQDLQYFPFRPADFICCAWTAMEKITRANGCLVV 175
>Z82287-5|CAB05315.1| 328|Caenorhabditis elegans Hypothetical
protein ZK550.5 protein.
Length = 328
Score = 115 bits (276), Expect = 4e-26
Identities = 62/160 (38%), Positives = 94/160 (58%), Gaps = 10/160 (6%)
Frame = +2
Query: 248 LSEEQKSFYWENGYLVIKELIDFTSLYSYKQRFLQICKGIVDSPV-MIVKEQALFEKNLK 424
LS EQK FY +NG+L+++ + L Y+ +F IC+ V P M+V + K +
Sbjct: 32 LSVEQKQFYQKNGFLLVRGCVAKDELKKYENQFNAICERKVKPPPNMLVMKDVSIAKKVT 91
Query: 425 PE--EYINKLQEILYDDVFMTYGEHPRLLEVISQFIGDD---ITAIHSMFINKPPGT--- 580
P+ + I K+Q+ + V +Y E+ ++ +V+ IG ITA+H+M INKPP T
Sbjct: 92 PDSIDTITKVQDFTDEPVLFSYCENKKVTDVVRDLIGSPDTRITAMHTMLINKPPDTGAL 151
Query: 581 -ARHPPHQDLFYFPIRPVDKIIGSXTAVDHVNKDNGCLYV 697
+RHP HQDL YFP RP + + + TA++ +NK NGCL V
Sbjct: 152 TSRHPMHQDLIYFPWRPEELTVCAWTAMEKINKQNGCLQV 191
>AL110479-7|CAB54355.1| 288|Caenorhabditis elegans Hypothetical
protein Y105C5B.9 protein.
Length = 288
Score = 35.5 bits (78), Expect = 0.037
Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Frame = +2
Query: 410 EKNLKPEEYINKLQEILY--DDVFMTYGEHPRLLEVISQFIGDDITAIHSMFINKPPGTA 583
E + ++ +NK+ L+ D F + ++ + + + + SM+I K P
Sbjct: 84 ELTVPKDKALNKIGHGLHFLDPTFEKMTFNSKIQNIFKEIGYQEPGVVQSMYIFKQPKIG 143
Query: 584 RH-PPHQDLFYFPIRPVDKIIGSXTAVDHVNKDNGCL 691
H D + + P+D + G A+D + +NGCL
Sbjct: 144 GAVTDHVDSTFLRVDPIDHLTGVWIAIDEASVENGCL 180
>Z99281-46|CAB54455.3| 795|Caenorhabditis elegans Hypothetical
protein Y57G11C.32 protein.
Length = 795
Score = 31.5 bits (68), Expect = 0.60
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +2
Query: 179 KMPLKGLKVLPNPVFSELPQNYRLSEEQKSFYWENGYLVI 298
++PL+ +VLPNP++ E P + +EE K+F GY+ I
Sbjct: 201 ELPLESDEVLPNPIYEE-PGDQSETEEVKAFREIFGYIQI 239
>U40028-2|AAY55874.1| 1200|Caenorhabditis elegans Hypothetical
protein T05A7.11 protein.
Length = 1200
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 431 EYINKLQEILYDDVFMTYGEHPRLLEVISQF 523
EY+ KL +IL++D T+G +P ++ Q+
Sbjct: 594 EYLTKLYDILFNDETFTFGSNPSSPFLVIQY 624
>Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical
protein C36A4.8 protein.
Length = 547
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +2
Query: 413 KNLKPEEYINKLQE--ILYDDVFMTYGEHPRLLEVISQFIGDDITAIHSMFINKPPGTAR 586
KN+ EEYIN L+E D++ + +L+ + QF+ ++I + F PP +
Sbjct: 203 KNVDIEEYINTLRENSTEIDEIDALF----QLMPTMRQFLRNNINQLMEKFHVAPPKKSE 258
Query: 587 HPPHQDLFYFPIRPVDKI 640
P ++ + + + ++ I
Sbjct: 259 KPANRRVSFASSQDLENI 276
>Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical
protein ZK849.4 protein.
Length = 602
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 287 YLVIKELIDFTSLYS-YKQRFLQICKGIVDSPVMIVKEQALFEKNLKPEEY 436
YLV+ +++ F + + K+RF+ + K +VDS + +E + K +K + Y
Sbjct: 217 YLVLSQILLFREISTKVKKRFVDL-KCLVDSKFLTDEELKILSKEVKCDHY 266
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 50 CECTNYAYYVGTYIEQKISEFCVNNS 127
C+CT+ Y G Y E+ SE CV++S
Sbjct: 1836 CQCTDQFY--GIYCEKSCSEQCVHSS 1859
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,967,855
Number of Sequences: 27780
Number of extensions: 341598
Number of successful extensions: 730
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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