Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_M23
         (515 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4P5A1 Cluster: Putative uncharacterized protein; n=2; ...    34   1.7  
UniRef50_Q73R85 Cluster: Surface antigen, putative; n=1; Trepone...    33   5.1  
UniRef50_Q556F5 Cluster: C2H2 type Zn finger-containing protein;...    33   5.1  
UniRef50_Q3B4T5 Cluster: Putative uncharacterized protein; n=1; ...    32   6.8  
UniRef50_UPI000150A05F Cluster: NLI interacting factor-like phos...    32   8.9  
UniRef50_Q6MG59 Cluster: Protein G6b precursor; n=23; Eutheria|R...    32   8.9  

>UniRef50_Q4P5A1 Cluster: Putative uncharacterized protein; n=2;
           Dikarya|Rep: Putative uncharacterized protein - Ustilago
           maydis (Smut fungus)
          Length = 353

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 22/54 (40%), Positives = 28/54 (51%)
 Frame = +2

Query: 224 DGGCGGRNISLYLVERKEGSPTARSSRRESAKIVAEHSAAEK*FCSQNNTYVYT 385
           D GCG  ++SLYL ER   S     S   + KI  +  AAE+ F   NN  V+T
Sbjct: 125 DLGCGWGSLSLYLAERYPNSRIYALSNSRTQKIYIDSIAAERGF---NNLEVHT 175


>UniRef50_Q73R85 Cluster: Surface antigen, putative; n=1; Treponema
           denticola|Rep: Surface antigen, putative - Treponema
           denticola
          Length = 618

 Score = 32.7 bits (71), Expect = 5.1
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -3

Query: 162 SSQNGNLFVATKNDNDCDGTLCTVQIENETK 70
           S +NG  +V  + +N  D  +CT+Q  N+ K
Sbjct: 571 SEENGRFYVVDRRENSTDNNICTIQQVNDAK 601


>UniRef50_Q556F5 Cluster: C2H2 type Zn finger-containing protein;
           n=1; Dictyostelium discoideum AX4|Rep: C2H2 type Zn
           finger-containing protein - Dictyostelium discoideum AX4
          Length = 774

 Score = 32.7 bits (71), Expect = 5.1
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -1

Query: 359 NKIIFPLHYVLLLSSPIRALSSVRWGNLPFFPPS-KEKCSDRHNRH 225
           NK + P  Y  + SSP+   S+   GNL F   S  ++  D HN H
Sbjct: 689 NKSVLPSIYSSMQSSPLSTSSTTSKGNLSFLVSSNNDEDDDHHNHH 734


>UniRef50_Q3B4T5 Cluster: Putative uncharacterized protein; n=1;
           Pelodictyon luteolum DSM 273|Rep: Putative
           uncharacterized protein - Pelodictyon luteolum (strain
           DSM 273) (Chlorobium luteolum (strain DSM273))
          Length = 427

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -1

Query: 371 YYFANKIIFPLHYVLLLSSPIRALSSVRWGNLPF 270
           Y FANK +F ++Y+L+ S  I  L SV +G + F
Sbjct: 74  YPFANKPVFWVYYILIFSIGIGILHSVAYGAIAF 107


>UniRef50_UPI000150A05F Cluster: NLI interacting factor-like
           phosphatase family protein; n=1; Tetrahymena thermophila
           SB210|Rep: NLI interacting factor-like phosphatase
           family protein - Tetrahymena thermophila SB210
          Length = 926

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -3

Query: 153 NGNLFVATKNDNDCDGTLCTVQIENETKLACRFTIHCHS 37
           N N    ++N   C+ TLCT+Q   + ++ C F+I  H+
Sbjct: 721 NKNPSPFSRNVESCNETLCTIQCTPQEQIQCLFSIRPHA 759


>UniRef50_Q6MG59 Cluster: Protein G6b precursor; n=23; Eutheria|Rep:
           Protein G6b precursor - Rattus norvegicus (Rat)
          Length = 232

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 17/66 (25%), Positives = 25/66 (37%)
 Frame = +3

Query: 96  CKVFHHNHCRFSLPQINCHFAMTKNSNSQGSNTSAANAIALGAMAVVAVGTFLFTWWKER 275
           CK    N  R  +  +        + ++ GS  S      LG   V+ +G     WW+  
Sbjct: 106 CKGRQENESRTVIQVLGDKAGCRPSGSTHGSEYSKVLIPLLGFGLVLGLGALGLVWWRRS 165

Query: 276 KVPPPH 293
            VPP H
Sbjct: 166 CVPPSH 171


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 430,769,864
Number of Sequences: 1657284
Number of extensions: 8109415
Number of successful extensions: 20966
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20959
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)