Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_M22
(714 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9U4L6 Cluster: Probable mitochondrial import receptor ... 215 7e-55
UniRef50_Q18090 Cluster: Probable mitochondrial import receptor ... 179 7e-44
UniRef50_UPI0000585EFC Cluster: PREDICTED: similar to MGC139121 ... 172 6e-42
UniRef50_UPI00003C047E Cluster: PREDICTED: similar to Probable m... 163 4e-39
UniRef50_Q969M1 Cluster: Protein TOMM40-like; n=39; Euteleostomi... 151 2e-35
UniRef50_UPI00015554EE Cluster: PREDICTED: similar to translocas... 142 8e-33
UniRef50_Q5C261 Cluster: SJCHGC05929 protein; n=1; Schistosoma j... 142 1e-32
UniRef50_UPI0000D5599E Cluster: PREDICTED: similar to Probable m... 133 5e-30
UniRef50_UPI0000161D7D Cluster: translocase of outer mitochondri... 126 7e-28
UniRef50_UPI0000ECC112 Cluster: Protein TOMM40-like.; n=2; Gallu... 122 1e-26
UniRef50_UPI0000660B28 Cluster: Probable mitochondrial import re... 121 2e-26
UniRef50_UPI00015B56B0 Cluster: PREDICTED: similar to mitochondr... 113 4e-24
UniRef50_Q4SFT5 Cluster: Chromosome 7 SCAF14601, whole genome sh... 106 5e-22
UniRef50_Q8C0Y3 Cluster: 0 day neonate head cDNA, RIKEN full-len... 99 1e-19
UniRef50_Q207S5 Cluster: Translocase of outer mitochondrial memb... 79 1e-13
UniRef50_Q1E495 Cluster: Mitochondrial import receptor subunit T... 57 4e-07
UniRef50_A6SHX9 Cluster: Mitochondrial import receptor subunit T... 56 1e-06
UniRef50_Q4PGZ9 Cluster: Putative uncharacterized protein; n=1; ... 54 3e-06
UniRef50_P24391 Cluster: Mitochondrial import receptor subunit t... 52 1e-05
UniRef50_Q9LHE5 Cluster: Mitochondrial import receptor subunit T... 52 2e-05
UniRef50_O13656 Cluster: Probable mitochondrial import receptor ... 47 4e-04
UniRef50_Q2GWC4 Cluster: Putative uncharacterized protein; n=1; ... 47 5e-04
UniRef50_P23644 Cluster: Mitochondrial import receptor subunit T... 45 0.002
UniRef50_Q9VF44 Cluster: CG4520-PA; n=2; Sophophora|Rep: CG4520-... 43 0.007
UniRef50_Q1W0X2 Cluster: Mitochondrial import receptor-like prot... 38 0.25
UniRef50_Q5ZTF0 Cluster: Acetylpolyamine aminohydolase; n=4; Leg... 38 0.32
UniRef50_Q16VI0 Cluster: Outer mitochondrial translocase subunit... 37 0.57
UniRef50_A0W5R6 Cluster: Beta-ketoacyl synthase; n=1; Geobacter ... 36 1.3
UniRef50_Q482M4 Cluster: DNA polymerase II; n=1; Colwellia psych... 34 4.0
UniRef50_Q3A254 Cluster: Sensory box/GGDEF family protein; n=1; ... 33 7.0
UniRef50_Q607T2 Cluster: Sensory box protein/GGDEF domain protei... 33 9.2
>UniRef50_Q9U4L6 Cluster: Probable mitochondrial import receptor
subunit TOM40 homolog; n=11; Eumetazoa|Rep: Probable
mitochondrial import receptor subunit TOM40 homolog -
Drosophila melanogaster (Fruit fly)
Length = 344
Score = 215 bits (526), Expect = 7e-55
Identities = 98/182 (53%), Positives = 132/182 (72%), Gaps = 1/182 (0%)
Frame = +1
Query: 172 GTLDELHKKTKEVMPVNFEGGKLMVNRGLSNHFQMSHTLTMSSQ-QNGYKLGGTYIGTKQ 348
GT++ELHKK K++ + FEG K+M+N+GLSNHFQ+SHT+ MS+ +GY+ G TY+GTK+
Sbjct: 61 GTVEELHKKCKDIQAITFEGAKIMLNKGLSNHFQVSHTINMSNVVPSGYRFGATYVGTKE 120
Query: 349 ISPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIRVKGAAQIQECKLTATQGTVEYKGSDYS 528
SPTEAFPV+LGD+DPAGN+N ++IHQ + +R K A+QIQE K+ A+Q T +Y+GSDY+
Sbjct: 121 FSPTEAFPVLLGDIDPAGNLNANVIHQFSARLRCKFASQIQESKVVASQLTTDYRGSDYT 180
Query: 529 LALVAGKPDFNDKSAMFVGHYLQSVTKRLALGAELVYQSGARIMGGEICIVSGAAXYTMD 708
L+L P S + VG YLQSVT LALG+EL YQ G + G +I I+S YT
Sbjct: 181 LSLTVANPSIFTNSGVVVGQYLQSVTPALALGSELAYQFGPNVPGRQIAIMSVVGRYTAG 240
Query: 709 DS 714
S
Sbjct: 241 SS 242
>UniRef50_Q18090 Cluster: Probable mitochondrial import receptor
subunit TOM40 homolog; n=2; Caenorhabditis|Rep: Probable
mitochondrial import receptor subunit TOM40 homolog -
Caenorhabditis elegans
Length = 301
Score = 179 bits (435), Expect = 7e-44
Identities = 83/177 (46%), Positives = 118/177 (66%)
Frame = +1
Query: 172 GTLDELHKKTKEVMPVNFEGGKLMVNRGLSNHFQMSHTLTMSSQQNGYKLGGTYIGTKQI 351
G+ +ELH+K ++V P FEG KLMVN+GLS+HFQ+SHTL++S+ GY+ G TY+GT Q+
Sbjct: 19 GSYEELHRKARDVFPTCFEGAKLMVNKGLSSHFQVSHTLSLSAMNTGYRFGATYVGTNQV 78
Query: 352 SPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIRVKGAAQIQECKLTATQGTVEYKGSDYSL 531
P EA+P++LGD D GN +++HQL R K QIQ+ KL Q T+E KG +L
Sbjct: 79 GPAEAYPILLGDTDVNGNTTATILHQL-GIYRTKLQGQIQQGKLAGAQATIERKGRLSTL 137
Query: 532 ALVAGKPDFNDKSAMFVGHYLQSVTKRLALGAELVYQSGARIMGGEICIVSGAAXYT 702
L D +++ + VG +L+ +T RL +G E+VYQ G I GG+I ++S AA YT
Sbjct: 138 GLTLANIDLVNEAGILVGQFLRRLTPRLDVGTEMVYQYGKNIPGGQISVLSYAARYT 194
>UniRef50_UPI0000585EFC Cluster: PREDICTED: similar to MGC139121
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to MGC139121 protein -
Strongylocentrotus purpuratus
Length = 330
Score = 172 bits (419), Expect = 6e-42
Identities = 84/181 (46%), Positives = 117/181 (64%), Gaps = 1/181 (0%)
Frame = +1
Query: 172 GTLDELHKKTKEVMPVNFEGGKLMVNRGLSNHFQMSHTLTMSS-QQNGYKLGGTYIGTKQ 348
G ++L KK KE+ P EG KL+VN+GLSNHFQ+SHTL++S+ + Y G TY+G+KQ
Sbjct: 51 GNFEDLFKKVKEIFPTPLEGCKLVVNKGLSNHFQVSHTLSLSAFNPSSYHFGSTYVGSKQ 110
Query: 349 ISPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIRVKGAAQIQECKLTATQGTVEYKGSDYS 528
ISP E+FPV+LGD+D +G++N +IHQL IR K Q Q+ K Q +EYKG Y+
Sbjct: 111 ISPNESFPVLLGDIDTSGSLNAQIIHQLADRIRSKFVVQTQQTKWGVYQAELEYKGPSYT 170
Query: 529 LALVAGKPDFNDKSAMFVGHYLQSVTKRLALGAELVYQSGARIMGGEICIVSGAAXYTMD 708
L D + + + V HY+QS+T+RLA+GAEL+Y G G + +VS A Y D
Sbjct: 171 GVLTMANIDPLEGTGIAVAHYMQSITQRLAVGAELLYHCG---QGQQAAVVSLAGKYAAD 227
Query: 709 D 711
+
Sbjct: 228 N 228
>UniRef50_UPI00003C047E Cluster: PREDICTED: similar to Probable
mitochondrial import receptor subunit TOM40 homolog
(Translocase of outer membrane 40 kDa subunit homolog)
(Male sterile protein 15); n=1; Apis mellifera|Rep:
PREDICTED: similar to Probable mitochondrial import
receptor subunit TOM40 homolog (Translocase of outer
membrane 40 kDa subunit homolog) (Male sterile protein
15) - Apis mellifera
Length = 321
Score = 163 bits (396), Expect = 4e-39
Identities = 71/167 (42%), Positives = 112/167 (67%), Gaps = 1/167 (0%)
Frame = +1
Query: 172 GTLDELHKKTKEVMPVNFEGGKLMVNRGLSNHFQMSHTLTMSS-QQNGYKLGGTYIGTKQ 348
G+ +++HKK K++ P NFEG +L++N+ LS HF ++HT+T+SS +GYK G YIGTK
Sbjct: 36 GSFEDIHKKVKDLYPQNFEGARLIINKILSQHFNVTHTITLSSVTPSGYKFGAKYIGTKV 95
Query: 349 ISPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIRVKGAAQIQECKLTATQGTVEYKGSDYS 528
++P E +PV GD+ P GN+ S +H L +R K +AQI + K A+ ++EY+ +D++
Sbjct: 96 VNPNERYPVASGDIAPNGNLTASFMHTLGCRLRYKLSAQIADGKCKASSSSLEYRSNDFT 155
Query: 529 LALVAGKPDFNDKSAMFVGHYLQSVTKRLALGAELVYQSGARIMGGE 669
+A+ P F K V H+LQS+T R+ALGAE+ G+++ GG+
Sbjct: 156 VAITLANPKFTKKQGTVVIHFLQSITSRIALGAEIACLRGSKVPGGQ 202
>UniRef50_Q969M1 Cluster: Protein TOMM40-like; n=39;
Euteleostomi|Rep: Protein TOMM40-like - Homo sapiens
(Human)
Length = 308
Score = 151 bits (365), Expect = 2e-35
Identities = 78/178 (43%), Positives = 107/178 (60%), Gaps = 1/178 (0%)
Frame = +1
Query: 172 GTLDELHKKTKEVMPVNFEGGKLMVNRGLSNHFQMSHTLTMSSQQ-NGYKLGGTYIGTKQ 348
G+ DELH+ K+V P EG KL+VN+ LS+HFQ++HT+ MS+ GY L Y G Q
Sbjct: 28 GSFDELHRLCKDVFPAQMEGVKLVVNKVLSSHFQVAHTIHMSALGLPGYHLHAAYAGDWQ 87
Query: 349 ISPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIRVKGAAQIQECKLTATQGTVEYKGSDYS 528
+SPTE FP V+GD+D +G++N ++ L +R K Q Q+ K Q EY+G DY+
Sbjct: 88 LSPTEVFPTVVGDMDSSGSLNAQVLLLLAERLRAKAVFQTQQAKFLTWQFDGEYRGDDYT 147
Query: 529 LALVAGKPDFNDKSAMFVGHYLQSVTKRLALGAELVYQSGARIMGGEICIVSGAAXYT 702
L G PD +S + V H+LQS+T RL LG ELVY R G E I++ A Y+
Sbjct: 148 ATLTLGNPDLIGESVIMVAHFLQSLTHRLVLGGELVYH---RRPGEEGAILTLAGKYS 202
>UniRef50_UPI00015554EE Cluster: PREDICTED: similar to translocase
of outer mitochondrial membrane 40 homolog (yeast); n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
translocase of outer mitochondrial membrane 40 homolog
(yeast) - Ornithorhynchus anatinus
Length = 602
Score = 142 bits (344), Expect = 8e-33
Identities = 65/129 (50%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
Frame = +1
Query: 172 GTLDELHKKTKEVMPVNFEGGKLMVNRGLSNHFQMSHTLTMSSQ-QNGYKLGGTYIGTKQ 348
GT +E H+K K++ PV EG KL VN+GLSNHFQ++HT+ +S+ + Y G TY+GTKQ
Sbjct: 90 GTFEECHRKCKDLFPVQMEGVKLTVNKGLSNHFQVNHTVALSTVGDSNYHFGVTYVGTKQ 149
Query: 349 ISPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIRVKGAAQIQECKLTATQGTVEYKGSDYS 528
+SPTEAFPV++GD+D +G++N +IHQL +R K A Q Q+ K Q EY+GSD++
Sbjct: 150 LSPTEAFPVLVGDMDNSGSLNAQVIHQLGAGLRSKMAVQTQQSKFVNWQVDGEYRGSDFT 209
Query: 529 LALVAGKPD 555
A+ G PD
Sbjct: 210 AAVTLGNPD 218
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/75 (50%), Positives = 53/75 (70%)
Frame = +1
Query: 331 YIGTKQISPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIRVKGAAQIQECKLTATQGTVEY 510
Y+GTKQ+SPTEAFPV++GD+D +G++N +IHQL +R K A Q Q+ K Q EY
Sbjct: 242 YVGTKQLSPTEAFPVLVGDMDNSGSLNAQVIHQLGAGLRSKMAVQTQQSKFVNWQVDGEY 301
Query: 511 KGSDYSLALVAGKPD 555
+GSD++ A+ G PD
Sbjct: 302 RGSDFTAAVTLGNPD 316
>UniRef50_Q5C261 Cluster: SJCHGC05929 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05929 protein - Schistosoma
japonicum (Blood fluke)
Length = 317
Score = 142 bits (343), Expect = 1e-32
Identities = 65/177 (36%), Positives = 108/177 (61%), Gaps = 1/177 (0%)
Frame = +1
Query: 172 GTLDELHKKTKEVMPVNFEGGKLMVNRGLSNHFQMSHTLTMSS-QQNGYKLGGTYIGTKQ 348
GT++ +H K ++ PV FEG +L+VN+GLS +FQ++H+L+++S +Q GY+ G TY+G +
Sbjct: 32 GTVENIHNKAHDIFPVPFEGARLVVNKGLSPNFQVNHSLSLNSDEQCGYRFGVTYVGHNK 91
Query: 349 ISPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIRVKGAAQIQECKLTATQGTVEYKGSDYS 528
+S TE++PV++ ++ P GN+ +IH++ P I V+ AQ+Q + Q VEY+
Sbjct: 92 VSDTESYPVLMSELQPNGNMQAQIIHRMFPSIYVRYIAQLQRHRFGGQQACVEYRRPKVQ 151
Query: 529 LALVAGKPDFNDKSAMFVGHYLQSVTKRLALGAELVYQSGARIMGGEICIVSGAAXY 699
+L PD N M ++ +TKRLALG+ YQ ++ G+ + S A Y
Sbjct: 152 ASLTLINPDINRSQCMAALDVMRQITKRLALGSAFFYQCSPQLPAGQDGVFSFGAKY 208
>UniRef50_UPI0000D5599E Cluster: PREDICTED: similar to Probable
mitochondrial import receptor subunit TOM40 homolog
(Translocase of outer membrane 40 kDa subunit homolog)
(Male sterile protein 15) isoform 2; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to Probable
mitochondrial import receptor subunit TOM40 homolog
(Translocase of outer membrane 40 kDa subunit homolog)
(Male sterile protein 15) isoform 2 - Tribolium
castaneum
Length = 270
Score = 133 bits (321), Expect = 5e-30
Identities = 54/95 (56%), Positives = 77/95 (81%), Gaps = 1/95 (1%)
Frame = +1
Query: 172 GTLDELHKKTKEVMPVNFEGGKLMVNRGLSNHFQMSHTLTMSS-QQNGYKLGGTYIGTKQ 348
G L+E+H K K + P NFEG ++M+ RGLSNHFQ+SHT+ MSS +GY+ G TY+GTKQ
Sbjct: 40 GPLEEIHTKCKNIFPTNFEGARVMLTRGLSNHFQISHTINMSSITPSGYRFGATYVGTKQ 99
Query: 349 ISPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIRVK 453
ISP+EA+P++LGD+DP+GN+N ++IHQL +++ K
Sbjct: 100 ISPSEAYPILLGDIDPSGNLNATIIHQLCSKVQAK 134
Score = 46.4 bits (105), Expect = 7e-04
Identities = 25/73 (34%), Positives = 38/73 (52%)
Frame = +1
Query: 496 GTVEYKGSDYSLALVAGKPDFNDKSAMFVGHYLQSVTKRLALGAELVYQSGARIMGGEIC 675
GT + S+ L+ + +A + V +LALG+EL YQ G I GGEI
Sbjct: 96 GTKQISPSEAYPILLGDIDPSGNLNATIIHQLCSKVQAKLALGSELAYQKGPAIPGGEIA 155
Query: 676 IVSGAAXYTMDDS 714
++S AA YT +++
Sbjct: 156 LLSAAAKYTTENT 168
>UniRef50_UPI0000161D7D Cluster: translocase of outer mitochondrial
membrane 40 homolog; n=2; Theria|Rep: translocase of
outer mitochondrial membrane 40 homolog - Mus musculus
Length = 309
Score = 126 bits (303), Expect = 7e-28
Identities = 61/126 (48%), Positives = 86/126 (68%), Gaps = 6/126 (4%)
Frame = +1
Query: 172 GTLDELHKKTKEVMPVNFEGGKLMVNRGLSNHFQMSHTLTMSS-QQNGYKLGGTYIGTKQ 348
GT +E H+K KE+ PV EG KL VN+GLSN FQ++HT+ + + ++ Y G TY+GTKQ
Sbjct: 79 GTFEECHRKCKELFPVQMEGVKLTVNKGLSNRFQVTHTVALGTIGESNYHFGVTYVGTKQ 138
Query: 349 ISPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIRVKGAAQIQECKLT-----ATQGTVEYK 513
+SPTEAFPV++GD+D +G++N +IHQL+P +R K A Q Q+ KL +GTV
Sbjct: 139 LSPTEAFPVLVGDMDNSGSLNAQVIHQLSPGLRSKMAIQTQQSKLVYHRRPGEEGTVMSL 198
Query: 514 GSDYSL 531
Y+L
Sbjct: 199 AGKYTL 204
>UniRef50_UPI0000ECC112 Cluster: Protein TOMM40-like.; n=2; Gallus
gallus|Rep: Protein TOMM40-like. - Gallus gallus
Length = 178
Score = 122 bits (293), Expect = 1e-26
Identities = 62/150 (41%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
Frame = +1
Query: 256 LSNHFQMSHTLTMSSQ-QNGYKLGGTYIGTKQISPTEAFPVVLGDVDPAGNVNCSLIHQL 432
LS+HFQ++HT+ MS+ + Y T++G +Q+ PTEAFP ++GD+D +G++N ++H L
Sbjct: 3 LSSHFQVTHTVHMSTLGPSNYHFNATFVGDRQLGPTEAFPSLVGDMDNSGSLNAQILHLL 62
Query: 433 TPEIRVKGAAQIQECKLTATQGTVEYKGSDYSLALVAGKPDFNDKSAMFVGHYLQSVTKR 612
IR K Q + K Q EY+G D + L G PD S + V H+LQSVT R
Sbjct: 63 AERIRTKAVFQTHQAKFVTWQFDGEYRGDDCTATLTLGNPDLLGGSVILVAHFLQSVTPR 122
Query: 613 LALGAELVYQSGARIMGGEICIVSGAAXYT 702
L LG E+VY R G E I++ A YT
Sbjct: 123 LVLGGEMVYH---RRPGEEGAILTLAGKYT 149
>UniRef50_UPI0000660B28 Cluster: Probable mitochondrial import
receptor subunit TOM40 homolog (Translocase of outer
membrane 40 kDa subunit homolog) (Haymaker protein)
(p38.5).; n=1; Takifugu rubripes|Rep: Probable
mitochondrial import receptor subunit TOM40 homolog
(Translocase of outer membrane 40 kDa subunit homolog)
(Haymaker protein) (p38.5). - Takifugu rubripes
Length = 203
Score = 121 bits (291), Expect = 2e-26
Identities = 61/133 (45%), Positives = 81/133 (60%)
Frame = +1
Query: 304 QNGYKLGGTYIGTKQISPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIRVKGAAQIQECKL 483
++GY+ G TY+G+KQ P E+FPV++GD+D G++N +IHQLT +R K A Q Q+ K
Sbjct: 74 ESGYRFGSTYVGSKQTGPAESFPVMVGDMDNTGSLNAQIIHQLTTAVRSKIAIQTQQHKF 133
Query: 484 TATQGTVEYKGSDYSLALVAGKPDFNDKSAMFVGHYLQSVTKRLALGAELVYQSGARIMG 663
Q EY+G D++ A+ G PD S + V HYLQSVT LALG ELVY R G
Sbjct: 134 VNWQCDFEYRGEDFTTAVTLGNPDVVVGSGILVSHYLQSVTPALALGGELVYH---RRPG 190
Query: 664 GEICIVSGAAXYT 702
E + S YT
Sbjct: 191 EEGTVTSFLGRYT 203
>UniRef50_UPI00015B56B0 Cluster: PREDICTED: similar to mitochondrial
import receptor subunit tom40; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to mitochondrial
import receptor subunit tom40 - Nasonia vitripennis
Length = 330
Score = 113 bits (272), Expect = 4e-24
Identities = 55/189 (29%), Positives = 103/189 (54%), Gaps = 12/189 (6%)
Frame = +1
Query: 172 GTLDELHKKTKEVMPVNFEGGKLMVNRGLSNHFQMSHTLTMSSQQN------------GY 315
G +E+HKK + P F G +++V + LSN F ++HT+ + SQ + GY
Sbjct: 35 GVFEEIHKKFDNLNPNLFNGMRIIVKKILSNSFNVTHTIALCSQNSDISANQIGEEKEGY 94
Query: 316 KLGGTYIGTKQISPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIRVKGAAQIQECKLTATQ 495
K +YIG K++ E +P++ GD+ P+GN+ +LI + +R K A Q++ K ++
Sbjct: 95 KFASSYIGIKRVGYKERYPILYGDITPSGNLTANLIQTIGCRLRFKFATQVKRNKFKNSK 154
Query: 496 GTVEYKGSDYSLALVAGKPDFNDKSAMFVGHYLQSVTKRLALGAELVYQSGARIMGGEIC 675
+EY+ DY++ P + + + +LQ++T R+ LGAE+ Y+ +++ G +
Sbjct: 155 TAIEYRSDDYTITASLVNPHILKQEGLLLLQFLQAITSRVTLGAEIAYEMNSKLPGRQQA 214
Query: 676 IVSGAAXYT 702
++ A Y+
Sbjct: 215 NLALALRYS 223
>UniRef50_Q4SFT5 Cluster: Chromosome 7 SCAF14601, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 7
SCAF14601, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 358
Score = 106 bits (255), Expect = 5e-22
Identities = 56/166 (33%), Positives = 92/166 (55%), Gaps = 1/166 (0%)
Frame = +1
Query: 172 GTLDELHKKTKEVMPVNFEGGKLMVNRGLSNHFQMSHTLTMSSQ-QNGYKLGGTYIGTKQ 348
G+ LH+ K+V P EG K++VN+ LS+ F++SH L +S+ + Y+ ++ +
Sbjct: 51 GSFHSLHRSCKDVFPQQIEGVKMIVNKTLSSFFKVSHMLHLSAVCPSYYRFHVEHLQSDD 110
Query: 349 ISPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIRVKGAAQIQECKLTATQGTVEYKGSDYS 528
S + P ++G++D +G++N + LT +R A Q+ + Q EY+GSD++
Sbjct: 111 YSKDKDAPALIGEMDSSGSLNAHALLHLTERVR---ARTTQQSQFVTWQFETEYRGSDFT 167
Query: 529 LALVAGKPDFNDKSAMFVGHYLQSVTKRLALGAELVYQSGARIMGG 666
A+ PD +S + V H+LQSV+ L LG ELVY G GG
Sbjct: 168 AAVTVANPDILRESVILVAHFLQSVSSGLVLGGELVYHRGRAEEGG 213
>UniRef50_Q8C0Y3 Cluster: 0 day neonate head cDNA, RIKEN full-length
enriched library, clone:4833447E13 product:inferred:
nuclear receptor subfamily 1, group I, member 3, full
insert sequence; n=15; Euteleostomi|Rep: 0 day neonate
head cDNA, RIKEN full-length enriched library,
clone:4833447E13 product:inferred: nuclear receptor
subfamily 1, group I, member 3, full insert sequence -
Mus musculus (Mouse)
Length = 231
Score = 98.7 bits (235), Expect = 1e-19
Identities = 50/119 (42%), Positives = 69/119 (57%)
Frame = +1
Query: 346 QISPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIRVKGAAQIQECKLTATQGTVEYKGSDY 525
Q+SPTE FP V+GD+D +G++N ++ L +R K Q Q+ K Q EY+G DY
Sbjct: 10 QLSPTEVFPTVVGDMDSSGSLNAQVLLLLAERLRAKAVFQTQQAKFLTWQFDGEYRGDDY 69
Query: 526 SLALVAGKPDFNDKSAMFVGHYLQSVTKRLALGAELVYQSGARIMGGEICIVSGAAXYT 702
+ L G PD +S + V H+LQS+T RL LG ELVY R G E I++ A Y+
Sbjct: 70 TATLTLGNPDLIGESVIMVAHFLQSITHRLVLGGELVYH---RRPGEEGAILTLAGKYS 125
>UniRef50_Q207S5 Cluster: Translocase of outer mitochondrial
membrane 40-like; n=1; Ictalurus punctatus|Rep:
Translocase of outer mitochondrial membrane 40-like -
Ictalurus punctatus (Channel catfish)
Length = 147
Score = 79.0 bits (186), Expect = 1e-13
Identities = 41/108 (37%), Positives = 58/108 (53%)
Frame = +1
Query: 313 YKLGGTYIGTKQISPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIRVKGAAQIQECKLTAT 492
Y T+I Q+ A V VD G++N +IHQ++ +R K A Q Q+ K
Sbjct: 40 YDHPATFISGFQLEFKAARQFVYTHVDNTGSLNAQIIHQISNRVRSKLAFQTQQQKFVNW 99
Query: 493 QGTVEYKGSDYSLALVAGKPDFNDKSAMFVGHYLQSVTKRLALGAELV 636
+G E+KG D++ + G PD S + + HYLQS+T LALG ELV
Sbjct: 100 RGDAEFKGDDFTATVTVGNPDMVVGSGIVIAHYLQSITPSLALGGELV 147
>UniRef50_Q1E495 Cluster: Mitochondrial import receptor subunit
TOM40; n=3; Eurotiomycetidae|Rep: Mitochondrial import
receptor subunit TOM40 - Coccidioides immitis
Length = 355
Score = 57.2 bits (132), Expect = 4e-07
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 13/170 (7%)
Frame = +1
Query: 172 GTLDELHKKT-KEVMPVNFEGGKLMVNR----GLSNHFQMSHTLTMSSQQN--GYKLGGT 330
GT++ + ++ K+V+ NF L + G+S F++SH TM SQ N Y
Sbjct: 40 GTVENVAREVQKDVLLSNFMFTGLRADLTKVFGVSPLFRVSHAFTMGSQGNLPPYAFSSM 99
Query: 331 YIGTKQISPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIRVKGAAQIQECKLTATQGTVE- 507
+ GT + ++ G++ G +N ++ T + K AQI A QG ++
Sbjct: 100 F-GTPSV-------LMQGNIGSDGALNAVCNYRWTSALVTKANAQIMP---GAAQGLIQI 148
Query: 508 ---YKGSDYSLALVAGKPDFNDK--SAMFVGHYLQSVTKRLALGAELVYQ 642
Y GSD+S+++ A P F + + +++G YLQS+T LALG E ++Q
Sbjct: 149 DNDYTGSDFSVSIKAFNPSFLEGGLTGIYIGSYLQSITPGLALGLEAMWQ 198
>UniRef50_A6SHX9 Cluster: Mitochondrial import receptor subunit
TOM40; n=10; Pezizomycotina|Rep: Mitochondrial import
receptor subunit TOM40 - Botryotinia fuckeliana B05.10
Length = 356
Score = 55.6 bits (128), Expect = 1e-06
Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 2/150 (1%)
Frame = +1
Query: 268 FQMSHTLTMSSQQNGYKLGGTYIGTKQISPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIR 447
FQ+SH +M SQ G GT +I + G++D G + ++ T
Sbjct: 81 FQVSHAFSMGSQGLPPYTFGALFGTSKI-------FMQGNMDNEGQLTTRFNYRWTSAFV 133
Query: 448 VKGAAQIQECKLTATQGTVEYKGSDYSLALVAGKPDFNDK--SAMFVGHYLQSVTKRLAL 621
K Q+ + Q EY G D++ ++ + P D + +F+G YLQ+VT LAL
Sbjct: 134 TKTQLQVAPGQ-AMMQLDNEYTGQDFTASIKSLNPSILDGGFTGIFIGQYLQAVTPNLAL 192
Query: 622 GAELVYQSGARIMGGEICIVSGAAXYTMDD 711
G E V+Q A G E VS A Y D
Sbjct: 193 GLEAVWQRAAMNQGPETA-VSYCAKYKGSD 221
>UniRef50_Q4PGZ9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 391
Score = 54.0 bits (124), Expect = 3e-06
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
Frame = +1
Query: 172 GTLDELHKKTKEVMPVNF--EGGKLMVNRGLSNH--FQMSHTLTMSSQQ--NGYKLGGTY 333
GT++ L ++ K V NF +G + + + +S + FQ++H +M SQ + Y G Y
Sbjct: 91 GTVEHLQREVKGVHTTNFMFDGARADLTKAISINPIFQVTHAFSMGSQAAPSSYNFGAVY 150
Query: 334 IGTKQISPTEAFPVVLGD-VDPAGNVNCSLIHQLTPEIRVKGAAQIQECKLTATQGTVEY 510
K F L D ++ N + T +++ + A + + Q +Y
Sbjct: 151 GDNKNF-----FQAGLDDGLNVTMRANRGWVAGHTTKVQAQLTATPGQ---SFVQIEHDY 202
Query: 511 KGSDYSLALVAGKPDFNDKSAMFVGHYLQSVTKRLALGAELVYQ 642
+G+D+S A P D + +++ +YLQS+T+ A G E VYQ
Sbjct: 203 QGTDHSANFKALNPSPTDLTGIYIVNYLQSLTRNFAFGVETVYQ 246
>UniRef50_P24391 Cluster: Mitochondrial import receptor subunit
tom-40; n=2; Sordariomycetes|Rep: Mitochondrial import
receptor subunit tom-40 - Neurospora crassa
Length = 349
Score = 52.4 bits (120), Expect = 1e-05
Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 7/187 (3%)
Frame = +1
Query: 172 GTLDELHKKT-KEVMPVN--FEGGKLMVNRG--LSNHFQMSHTLTMSSQQNGYKLGGTYI 336
GT++ + ++ ++ + N F G + V + L+ FQ+SH M + N Y Y
Sbjct: 42 GTIETIAREVQRDTLLTNYMFSGLRADVTKAFSLAPLFQVSHQFAMGERLNPYAFAALY- 100
Query: 337 GTKQISPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIRVKGAAQIQECKLTATQGTVEYKG 516
GT QI G++D G ++ ++ K I + A Q E+ G
Sbjct: 101 GTNQI-------FAQGNLDNEGALSTRFNYRWGDRTITKTQFSIGGGQDMA-QFEHEHLG 152
Query: 517 SDYSLALVAGKPDFNDK--SAMFVGHYLQSVTKRLALGAELVYQSGARIMGGEICIVSGA 690
D+S +L A P F D + +FVG YLQ+VT RL LG + V+Q G + I S
Sbjct: 153 DDFSASLKAINPSFLDGGLTGIFVGDYLQAVTPRLGLGLQAVWQRQGLTQGPDTAI-SYF 211
Query: 691 AXYTMDD 711
A Y D
Sbjct: 212 ARYKAGD 218
>UniRef50_Q9LHE5 Cluster: Mitochondrial import receptor subunit
TOM40 homolog 1; n=11; Viridiplantae|Rep: Mitochondrial
import receptor subunit TOM40 homolog 1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 309
Score = 51.6 bits (118), Expect = 2e-05
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 11/172 (6%)
Frame = +1
Query: 181 DELHKKT-KEVMPVNFEGGKLMVNRGLSNHFQMSHTLTMS-------SQQNGYKLGGTY- 333
+ELH++ + NFEG + R L+ F +SH++ M S + K+ +
Sbjct: 35 EELHREALMSLKSDNFEGLRFDFTRALNQKFSLSHSVMMGPTEVPAQSPETTIKIPTAHY 94
Query: 334 -IGTKQISPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIRVKGAAQI-QECKLTATQGTVE 507
G P +++G V G +N L LT ++ VK A I E ++ +
Sbjct: 95 EFGANYYDPKL---LLIGRVMTDGRLNARLKADLTDKLVVKANALITNEEHMSQAMFNFD 151
Query: 508 YKGSDYSLALVAGKPDFNDKSAMFVGHYLQSVTKRLALGAELVYQSGARIMG 663
Y GSDY L G+ SA+ Y+QSVT L+LG E+ + R G
Sbjct: 152 YMGSDYRAQLQLGQ------SALIGATYIQSVTNHLSLGGEIFWAGVPRKSG 197
>UniRef50_O13656 Cluster: Probable mitochondrial import receptor
subunit tom40; n=2; Schizosaccharomyces pombe|Rep:
Probable mitochondrial import receptor subunit tom40 -
Schizosaccharomyces pombe (Fission yeast)
Length = 344
Score = 47.2 bits (107), Expect = 4e-04
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 7/187 (3%)
Frame = +1
Query: 172 GTLDELHKK-TKEVMPVN--FEGGKLMVNRGL--SNHFQMSHTLTMSSQQNGYKLGGTYI 336
GT + L K+ +K+++ N F G + V +G S F +SH + SQ T
Sbjct: 31 GTCENLSKEVSKDILLSNYAFTGVRADVTKGFCTSPWFTVSHAFALGSQVLPPYSFSTMF 90
Query: 337 GTKQISPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIRVKGAAQIQECKL-TATQGTVEYK 513
G + + + G VD G V L + K Q+ + Q ++K
Sbjct: 91 GGEPL-------FLRGSVDNDGAVQAMLNCTWNSNVLSKVQMQLSNGAVPNMCQIEHDHK 143
Query: 514 GSDYSLALVAGKPDFNDK-SAMFVGHYLQSVTKRLALGAELVYQSGARIMGGEICIVSGA 690
G D+S + A P + +K + +++ LQSVT +L+LG E ++Q + +G E +S
Sbjct: 144 GKDFSFSFKAMNPWYEEKLTGIYIISLLQSVTPKLSLGVEALWQKPSSSIGPEEATLSYM 203
Query: 691 AXYTMDD 711
Y D
Sbjct: 204 TRYNAAD 210
>UniRef50_Q2GWC4 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 321
Score = 46.8 bits (106), Expect = 5e-04
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +1
Query: 505 EYKGSDYSLALVAGKPDFNDK--SAMFVGHYLQSVTKRLALGAELVYQSGARIMGGEICI 678
EY G+D++ L A P + + +F+G YLQSVT +LALG E V+Q G + I
Sbjct: 119 EYLGNDFTATLKALNPSCLEGGLTGIFIGQYLQSVTPKLALGLEAVWQRAGLTQGPDTAI 178
Query: 679 VSGAAXYTMDD 711
S A Y D+
Sbjct: 179 -SYVARYKADN 188
>UniRef50_P23644 Cluster: Mitochondrial import receptor subunit
TOM40; n=13; Saccharomycetales|Rep: Mitochondrial import
receptor subunit TOM40 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 387
Score = 45.2 bits (102), Expect = 0.002
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Frame = +1
Query: 172 GTLDELHKKTKEVMPVN---FEGGKLMVNRGLSNH--FQMSHTLTMSSQQ-NGYKLGGTY 333
GT++ L+K+ + ++ F G + +N+ S + FQ SHT ++ SQ Y +
Sbjct: 61 GTVENLNKEVSRDVFLSQYFFTGLRADLNKAFSMNPAFQTSHTFSIGSQALPKYAFSALF 120
Query: 334 IGTKQISPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIRVKGAAQIQECKLTATQGTVEYK 513
+ + D+ +G +N + ++ + QI + + T Q +Y+
Sbjct: 121 ANDNLFAQGN----IDNDLSVSGRLNYGWDKKNISKVNL----QISDGQPTMCQLEQDYQ 172
Query: 514 GSDYSLALVAGKPDFNDK---SAMFVGHYLQSVTKRLALGAELVY 639
SD+S+ + P F++K + + V +LQSVT +LALG E +Y
Sbjct: 173 ASDFSVNVKTLNPSFSEKGEFTGVAVASFLQSVTPQLALGLETLY 217
>UniRef50_Q9VF44 Cluster: CG4520-PA; n=2; Sophophora|Rep: CG4520-PA
- Drosophila melanogaster (Fruit fly)
Length = 320
Score = 43.2 bits (97), Expect = 0.007
Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 3/165 (1%)
Frame = +1
Query: 157 NEKIQGTLDELHKKTKEVMPVNFEGGKL-MVNRGLSNHFQMSHTLTMSSQQNGYKLGGTY 333
N+K G + LH VMP ++G +L ++R N + + + + +G++ GG Y
Sbjct: 30 NKKNPGNVQNLHILAHRVMPKFYDGIELDYLHRLAPNKYITAAWVLSHIRPSGFRFGGLY 89
Query: 334 IGTKQISPTEAFPVVLGDVDPAG-NVNCSLIHQLTPEIRVKGAAQIQECKLTATQGTVEY 510
Q T P ++GD+ P N ++++ +R++ Q +Q T+E+
Sbjct: 90 TFRVQ-DDTMYTPTIMGDIHPTSLAANLNILYYPFQSLRMEAVLQKAREAAVESQYTIEW 148
Query: 511 -KGSDYSLALVAGKPDFNDKSAMFVGHYLQSVTKRLALGAELVYQ 642
+ D A + ++S ++SV+ ALG EL+ +
Sbjct: 149 TRPCD---TWTANFYNVRNESGRCTMSVMRSVSAHWALGGELLLE 190
>UniRef50_Q1W0X2 Cluster: Mitochondrial import receptor-like
protein; n=1; Nicotiana tabacum|Rep: Mitochondrial
import receptor-like protein - Nicotiana tabacum (Common
tobacco)
Length = 188
Score = 37.9 bits (84), Expect = 0.25
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 10/155 (6%)
Frame = +1
Query: 181 DELHKKT-KEVMPVNFEGGKLMVNRGLSNHFQMSHTLTM------SSQQNGYKLGGTY-- 333
+E+H++ + P FEG + +GL+ F +SH++ M + + K+ +
Sbjct: 43 EEIHREALMSLKPELFEGLRFDFTKGLNQRFSLSHSVFMGPTELPTQSTDIVKIPTAHYE 102
Query: 334 IGTKQISPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIRVKGAAQIQ-ECKLTATQGTVEY 510
G I P +++G V G VN + L+ + +K Q+ E ++ +Y
Sbjct: 103 FGANFIDPK---MMLIGRVLTDGRVNARVKCDLSENLSLKANGQLTGEPHMSHGMVNFDY 159
Query: 511 KGSDYSLALVAGKPDFNDKSAMFVGHYLQSVTKRL 615
KG DY G A+F Y+QSV+ L
Sbjct: 160 KGKDYKTQFQLG------NGALFGASYIQSVSPHL 188
>UniRef50_Q5ZTF0 Cluster: Acetylpolyamine aminohydolase; n=4;
Legionella pneumophila|Rep: Acetylpolyamine
aminohydolase - Legionella pneumophila subsp.
pneumophila (strain Philadelphia 1 /ATCC 33152 / DSM
7513)
Length = 426
Score = 37.5 bits (83), Expect = 0.32
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 273 DVSYINNELTTKWIQIGWNIH-WHKTDIS 356
D SYINNE ++ + +G NIH WH D+S
Sbjct: 254 DFSYINNEFNSEGVDVGKNIHVWHHNDLS 282
>UniRef50_Q16VI0 Cluster: Outer mitochondrial translocase subunit,
putative; n=2; Culicidae|Rep: Outer mitochondrial
translocase subunit, putative - Aedes aegypti
(Yellowfever mosquito)
Length = 292
Score = 36.7 bits (81), Expect = 0.57
Identities = 37/162 (22%), Positives = 73/162 (45%), Gaps = 5/162 (3%)
Frame = +1
Query: 172 GTLDELHKKTKEVMPVNFEGGKLMVNRGLSNHFQMSHTLTMSS-QQNGYKLGGTYIGTKQ 348
G LH++T ++ P FEG +L ++ L+ H + + +S G+++ G + K
Sbjct: 44 GDFSSLHQRTYDLRPEWFEGFQLNASKTLAVHRLIRASWHLSHITPTGFRI-GAQLHRKC 102
Query: 349 ISPTEAFPVVLGDVDPAGNV-NCSLIHQLTPEIRVKGAAQIQ---ECKLTATQGTVEYKG 516
P++ DV+P N L+++ I + + Q++ + ++++ G
Sbjct: 103 SDTVLKTPILAFDVNPGTLASNIFLLYRPVASICAEMSIQLKPQTHSNPLIDKLSLQHTG 162
Query: 517 SDYSLALVAGKPDFNDKSAMFVGHYLQSVTKRLALGAELVYQ 642
+ + L P +S +L S RLA GAEL+Y+
Sbjct: 163 TRTTTTLRCYNP--THQSCRVTLDHLMSYNDRLAFGAELLYE 202
>UniRef50_A0W5R6 Cluster: Beta-ketoacyl synthase; n=1; Geobacter
lovleyi SZ|Rep: Beta-ketoacyl synthase - Geobacter
lovleyi SZ
Length = 2249
Score = 35.5 bits (78), Expect = 1.3
Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Frame = +1
Query: 322 GGTYIGTKQISPTEAFPVVLGDVDPAGNVNCSLIHQLTPEIRVK-GAAQIQECKLTATQG 498
G Y+G + AFP +L ++ A L + P R + GAA+ QE +L ATQ
Sbjct: 584 GAQYVGMLRDLAC-AFPQLLDSLEQAETTTPGLTDLIYPADRFEQGAAEQQEAELRATQI 642
Query: 499 TVEYKGSDYSLALVAGKPDFNDKSAMFVGHYLQSVTKRLALGA--ELVYQSGARIMGGEI 672
G+ SL + F K+A GH +T A G E + S +R+ G +
Sbjct: 643 AQPAIGA-VSLGALRLLETFGLKAAAAAGHSYGELTALCAAGLLDETSFHSLSRLRGSLM 701
Query: 673 CIVSG 687
SG
Sbjct: 702 AAGSG 706
>UniRef50_Q482M4 Cluster: DNA polymerase II; n=1; Colwellia
psychrerythraea 34H|Rep: DNA polymerase II - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 818
Score = 33.9 bits (74), Expect = 4.0
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 376 VLGDVDPAGNVNCSLIHQLTPEIRVKGAAQIQECKLTATQGTVE--YKGSDYSLALVAGK 549
+ D+D GN +QLT +++ KGAA Q+ LT +E +G YS+ L A
Sbjct: 129 ITADIDYLGNHQLCGDYQLTKQVKCKGAAIEQQHSLTMLSIDIECSMQGELYSIGLYANN 188
Query: 550 PDFNDKSAMFVG 585
K + +G
Sbjct: 189 NHTVFKRVLMIG 200
>UniRef50_Q3A254 Cluster: Sensory box/GGDEF family protein; n=1;
Pelobacter carbinolicus DSM 2380|Rep: Sensory box/GGDEF
family protein - Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1)
Length = 874
Score = 33.1 bits (72), Expect = 7.0
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Frame = +1
Query: 262 NHFQMSHTLT-MSSQQNGYKLGGTYIGTKQISPTEAFPVVLGDVDPAGNVNCSLIHQLTP 438
N+ LT + ++ +L TYIG T V++ D+D N+N SL H+
Sbjct: 433 NYLAYHDVLTGLPNRLKAIELLQTYIGRANQRDTMV-AVLIFDLDRFKNLNESLGHETGD 491
Query: 439 EIRVKGAAQIQECKLTATQGTVEYKGSDYSLALVAGKPDFNDKSAMFVGHYLQSVTKRLA 618
EI ++ A +IQE L T + G ++ L L+ D + L+++ + L
Sbjct: 492 EILMEVARRIQE-MLRDTDVVARFGGDEF-LVLLEHVADSTGVKHV-AEKLLEAIAQPLR 548
Query: 619 LGAELVYQSGA 651
+G + Y +G+
Sbjct: 549 IGEQQFYLTGS 559
>UniRef50_Q607T2 Cluster: Sensory box protein/GGDEF domain protein;
n=1; Methylococcus capsulatus|Rep: Sensory box
protein/GGDEF domain protein - Methylococcus capsulatus
Length = 1346
Score = 32.7 bits (71), Expect = 9.2
Identities = 23/54 (42%), Positives = 28/54 (51%)
Frame = +1
Query: 361 EAFPVVLGDVDPAGNVNCSLIHQLTPEIRVKGAAQIQECKLTATQGTVEYKGSD 522
E VV DVD +VN SL HQ+ E+ V+ A QI+E T TV G D
Sbjct: 940 EELAVVFLDVDHFKDVNDSLGHQVGDELLVRVATQIKE--FTRETDTVARLGGD 991
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,287,714
Number of Sequences: 1657284
Number of extensions: 17101237
Number of successful extensions: 42300
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 40586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42269
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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