Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_M22
         (714 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           28   0.33 
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    27   0.77 
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    26   1.0  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   2.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   5.4  
AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related ...    23   7.2  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   9.5  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   9.5  
AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    23   9.5  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = +1

Query: 235 KLMVNRGLSNHFQMSHTLTMSSQQNGYKLGGTYIG 339
           KL++NR L NH +    + +S +Q+G++ G + IG
Sbjct: 572 KLILNR-LHNHLEDPAAVRLSDRQHGFRRGRSTIG 605



 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 365 ASVGDICFVPMYVPPNL 315
           A VG I F+  Y PP+L
Sbjct: 137 AKVGGITFLSCYAPPSL 153


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 395 GSTSPSTTGNASVGDICFVPMYVPPNLYP 309
           GST P     A V  I F+ +Y PP+L P
Sbjct: 71  GSTVPGLVA-AKVAGIDFISVYAPPSLSP 98


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -3

Query: 199 FFYEVHPKXPGFSRLLSFSIFCKSVLVSPELKTRYLL 89
           F  + HP+ PGF++ ++F  F      +P L+T Y L
Sbjct: 214 FRVQQHPQVPGFTQCVTFGFF-----ATPGLETAYNL 245


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 401 PAGSTSPSTTGNASVGDICFV 339
           PAGSTS S T  A+  D+ FV
Sbjct: 194 PAGSTSDSGTLRAAAMDVLFV 214


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 412 SSHYRQGPHHQAPPG 368
           S+H   GP+H  PPG
Sbjct: 103 SNHLLGGPNHHLPPG 117


>AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related 2
           protein protein.
          Length = 257

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 37  FAINNYSTNNLVKWVLYQAGTVSS 108
           + + NY+  N++   +Y+AG V+S
Sbjct: 209 YFVCNYAVTNIIDRPVYKAGAVAS 232


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 365 ASVGDICFVPMYVPPNL 315
           A +G + F+  Y PP+L
Sbjct: 91  AQIGGVVFISCYAPPSL 107


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 678  YANLSAHDPGTGLIHQFSP 622
            Y ++ +H+  +G IH F P
Sbjct: 1078 YVSIDSHEEDSGPIHNFRP 1096


>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 196 FYEVHPKXPGFSRLLSFSIFCKSVLVSPELK 104
           FYE +   PG    +   IF   VL+  +LK
Sbjct: 66  FYEQYKAVPGSPGFVGLYIFLNPVLLVTDLK 96


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 843,799
Number of Sequences: 2352
Number of extensions: 18726
Number of successful extensions: 36
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)