Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_M21
(485 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0451 + 3461229-3461561,3462043-3462290,3462425-3462716,346... 36 0.023
03_01_0319 - 2499470-2499598,2499681-2499746,2499830-2499937,250... 31 0.37
02_02_0059 - 6432945-6433115,6433975-6434061,6434585-6434787,643... 31 0.65
12_01_0830 - 7678038-7678444,7678996-7680943,7681231-7681983,768... 30 0.86
10_08_0270 + 16378878-16380566 30 0.86
07_03_1643 + 28329090-28329125,28329260-28329335,28329413-28330305 30 0.86
01_06_1210 + 35430143-35430796,35430912-35431004,35431397-354315... 30 0.86
08_02_0912 - 22536181-22537011 30 1.1
08_02_0751 + 20789843-20789908,20791152-20791313,20791516-207915... 30 1.1
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 30 1.1
06_03_0938 - 26126669-26127115,26127197-26127619,26127727-26128047 29 1.5
11_01_0496 + 3811434-3811566,3811578-3811819 29 2.0
02_05_1261 + 35305909-35307042,35307779-35307968,35308550-35308818 29 2.0
02_05_0733 + 31309835-31310434,31314138-31314254,31314364-313148... 29 2.0
11_01_0620 - 4964263-4965052,4965578-4965663,4966332-4966413,496... 29 2.6
09_03_0209 + 13505900-13506277,13507296-13508063,13508412-13509131 29 2.6
05_07_0020 + 27097140-27097676,27097857-27098036,27099361-270994... 29 2.6
10_08_0254 + 16236689-16236793,16237760-16237808,16237988-162380... 28 3.5
10_04_0005 + 7390697-7390705,7390943-7391096,7391225-7391424,739... 28 3.5
08_01_1030 + 10431485-10432390 28 3.5
05_04_0114 + 18090593-18092248 28 3.5
03_02_1015 + 13225092-13225625 28 3.5
07_01_0139 - 1014952-1015165,1015271-1015350,1015420-1015629,101... 28 4.6
05_04_0007 + 17092818-17093867 28 4.6
04_03_0212 + 12697854-12698549,12698655-12698930,12698991-126990... 28 4.6
12_02_0875 - 23920023-23920967,23921045-23921599,23921678-239220... 27 6.0
12_01_0982 + 9945920-9946066,9946185-9946254,9946481-9946526,994... 27 6.0
10_06_0020 - 9693126-9693437,9694940-9695368 27 6.0
05_01_0403 + 3179513-3179570,3181576-3181737,3182721-3182920 27 6.0
04_04_1676 - 35302498-35302836,35302911-35302997,35303063-353032... 27 6.0
04_04_1555 + 34376612-34376887,34377306-34377450,34377891-343780... 27 6.0
03_05_1166 - 30876802-30876899,30877233-30878685 27 6.0
03_02_0385 - 7980287-7981267 27 6.0
02_04_0391 + 22576839-22577387 27 6.0
10_08_0114 - 14911119-14911301,14911458-14911550,14911634-149116... 27 8.0
10_01_0042 + 562246-563550 27 8.0
07_03_1778 + 29451902-29452166,29452665-29452849,29453504-294536... 27 8.0
06_03_0366 - 19928681-19928944 27 8.0
06_03_0332 + 19652207-19652995 27 8.0
05_04_0129 - 18283862-18284328,18284382-18284580 27 8.0
04_03_1028 - 21827961-21827972,21828018-21828112,21828286-218283... 27 8.0
02_01_0362 + 2607097-2607371,2607766-2608612,2608842-2608910,260... 27 8.0
>03_01_0451 +
3461229-3461561,3462043-3462290,3462425-3462716,
3463057-3463209,3463288-3463674
Length = 470
Score = 35.5 bits (78), Expect = 0.023
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +1
Query: 241 PLHVPSQNHSRSRLLP-PPPGKSREEGLTRPSRHSIAV----YRWPRASSNG 381
PL +P + R R+L PPP + R EG RP ++AV RWP A G
Sbjct: 13 PLPLPRRRAPRPRVLHRPPPPRRRLEGAARPRAVAVAVNEARRRWPPAEGGG 64
>03_01_0319 -
2499470-2499598,2499681-2499746,2499830-2499937,
2500125-2500259,2500763-2500840,2500994-2501044,
2501805-2501879,2501975-2502037,2503048-2503137,
2503215-2503406,2503498-2503591,2503776-2504279,
2504415-2504614,2504712-2504756,2505023-2505082,
2505476-2505520,2505858-2505941,2506121-2506318,
2506960-2507667
Length = 974
Score = 31.5 bits (68), Expect = 0.37
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -2
Query: 364 VATGKPRLSAVRAASTPPLAISLAVEEGAGSGSDFVTAHGGD 239
VA +P A +S+P + +LA +E A +G+ V A+GGD
Sbjct: 45 VAVARPDGEATTESSSPSASRTLAGDEPAAAGAGEVEAYGGD 86
>02_02_0059 -
6432945-6433115,6433975-6434061,6434585-6434787,
6435281-6435392,6435473-6435517,6435622-6435726,
6435946-6435996,6436026-6436103,6437258-6437313,
6437784-6437853,6438288-6438392,6438525-6438637,
6439354-6439534,6439635-6440390
Length = 710
Score = 30.7 bits (66), Expect = 0.65
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Frame = +3
Query: 90 GXSHNGYNNG*PRDRGRTQTEIEGCSPLPVPF---DRQSVHHANATHPHQDAGSPPCAVT 260
G GY N R ++E PLP P + +S + ++ HP D PP +
Sbjct: 132 GGPQEGYFNHDHRYNRFQRSESPVAPPLPPPARYPEARSRYDSHGWHPEADVPPPPPPLE 191
Query: 261 KSLPLPAPSSTAREIARGGVDAALTALNRGLPVAT 365
P+P+ S + V ++L ++ G P AT
Sbjct: 192 P--PVPSSSDYHAKPPLQAVKSSLFPIHSGSPAAT 224
>12_01_0830 -
7678038-7678444,7678996-7680943,7681231-7681983,
7682701-7682824,7683590-7683723
Length = 1121
Score = 30.3 bits (65), Expect = 0.86
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Frame = +1
Query: 88 QGRLTTGIIMGSR--VIVGGPRQKSKVVHPYQFLLTDRAS-----ITRTRHIPTKMRDPL 246
+GR T I+ SR + R P + L+ R+S +TRTR + R
Sbjct: 71 RGRAQTKPILISRSSTMENAQRSSRSSASPNRLSLSPRSSSSNTALTRTRSTNSSSRCSP 130
Query: 247 HVPSQNHSRSRLLPPPPGKSREEGLTRPSRHSIAVYRWPRASSNGIT 387
+ Q+ + SR P PPG + LT P R R A+S+G T
Sbjct: 131 PLSLQSSTPSRRSPTPPG---NKTLTPPRRSPSPASRRMSATSSGPT 174
>10_08_0270 + 16378878-16380566
Length = 562
Score = 30.3 bits (65), Expect = 0.86
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +3
Query: 123 PRDRGRTQTEI-EGCSPLPVPFDRQSVHHANATHPHQDAGSPPCAVTKSLPLPA-PSSTA 296
P DRG + + S PV D +S ++T D G P + + SLP A P S A
Sbjct: 59 PADRGGARPSFSDSGSAKPVTVDHKSATTDSSTGTESDGGGEPSSASSSLPAAAHPFSRA 118
>07_03_1643 + 28329090-28329125,28329260-28329335,28329413-28330305
Length = 334
Score = 30.3 bits (65), Expect = 0.86
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 207 ANATHPHQDAG-SPPCAVTKSLPLPAPSSTAREIARGG 317
A+A P + A +PP A S+P PAP+ ++ E GG
Sbjct: 202 ADAAAPEKPAAKAPPAAPAPSMPAPAPTLSSPERPHGG 239
>01_06_1210 +
35430143-35430796,35430912-35431004,35431397-35431546,
35431817-35432076,35433378-35433641,35434475-35434682
Length = 542
Score = 30.3 bits (65), Expect = 0.86
Identities = 20/68 (29%), Positives = 28/68 (41%)
Frame = +3
Query: 165 SPLPVPFDRQSVHHANATHPHQDAGSPPCAVTKSLPLPAPSSTAREIARGGVDAALTALN 344
+P +PF H +++ A +PP S+P A S A GG +A TA
Sbjct: 37 APAALPFFSFPSSHLSSSSSSPIAATPPPLTPVSVPANASSPETPVDASGGSNAGATAPT 96
Query: 345 RGLPVATR 368
R P R
Sbjct: 97 RDAPQPDR 104
>08_02_0912 - 22536181-22537011
Length = 276
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 241 PLHVPSQNHSRSRLLPPPPGKSREE 315
PL + HS+ R PPPP REE
Sbjct: 129 PLVADAPRHSKKRKAPPPPSPPREE 153
>08_02_0751 +
20789843-20789908,20791152-20791313,20791516-20791566,
20792096-20792160,20792385-20792459,20792603-20792780,
20793171-20793353,20793436-20793549,20793627-20793736,
20793826-20793904,20794035-20794172
Length = 406
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 180 PFDRQSVHHANATHPHQDAGSPPCAVTKSLPLPAPSSTAREIARGGVDAALT 335
P + SV A T P +PP V++ + P P++T V AA T
Sbjct: 90 PTKQPSVDRAIPTAPATQPPAPPAPVSEPVTAPVPTATTASAPAAAVTAAST 141
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 154 SKVVHPY-QFLLTDRASITRTRHIPTKMRDPLHVPSQNHSRSRLLPPPPGKSREEGLTRP 330
SK HP S ++ + PT +R+P P R+ PPPP G RP
Sbjct: 4 SKANHPAASSSKVSSVSSSKPKPKPTPIRNPTPPPPPPRRRT---PPPPPPGSGPGPQRP 60
Query: 331 SRHSIAVYR 357
S S+A+ R
Sbjct: 61 SYLSVALRR 69
>06_03_0938 - 26126669-26127115,26127197-26127619,26127727-26128047
Length = 396
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +3
Query: 204 HANATHPHQDAGSPPCAVTKSLPLPAPSSTAREIARGGVDAALTA 338
H +A PH DAGS A K P S A + R + A A
Sbjct: 306 HNHAQPPHHDAGSKTAAAAKHSQHQPPPSAAAAVVRQQQEQAAAA 350
>11_01_0496 + 3811434-3811566,3811578-3811819
Length = 124
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/51 (39%), Positives = 23/51 (45%)
Frame = -2
Query: 295 AVEEGAGSGSDFVTAHGGDPASWWGCVAFA*WTLCRSKGTGRGEQPSISVW 143
A EE G G D T G S CVA W LCR+ G +P+ VW
Sbjct: 52 AGEEEVGGGDDCGTTCGLSSLSVL-CVALGVWALCRA-----GGEPAAVVW 96
>02_05_1261 + 35305909-35307042,35307779-35307968,35308550-35308818
Length = 530
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +3
Query: 165 SPLPVPFDRQSVHHANATHPHQDAGSPPCAVTKSL-PLPAPSSTAREIARGGVDAAL 332
SP + R S HH + P SP C V + + P+P S+ DAA+
Sbjct: 235 SPATMSHPRSSSHHHHHQQPGSSLSSPDCEVFEPVKPVPVTSNGDSNNKPDAADAAV 291
>02_05_0733 +
31309835-31310434,31314138-31314254,31314364-31314806,
31316831-31317137
Length = 488
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 142 PRQKSKVVHPYQFLLTDRASITRTRHIPTKMRDPLHVPSQNHS 270
PR + HP QFL +R +IT + H P + R H+P H+
Sbjct: 320 PRYVEDIRHP-QFL-KERHAITDSLHDPFRSRHVTHLPELQHA 360
>11_01_0620 -
4964263-4965052,4965578-4965663,4966332-4966413,
4967052-4967156,4967600-4967772,4967988-4968101,
4973939-4974037,4974320-4974398,4975424-4975492,
4975955-4976061
Length = 567
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 241 PLHVPSQNHSRSRLLPPPPGKSREEGLT 324
P ++P+ +HS++ PPP SR E ++
Sbjct: 372 PANIPAPSHSKTETNPPPSYDSRSESVS 399
>09_03_0209 + 13505900-13506277,13507296-13508063,13508412-13509131
Length = 621
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -2
Query: 343 LSAVRAASTPPLAISLAVEEGAGSGSDFVTAHGGDPASWWGCVAFA 206
LS A+ PP + + GAG+G+ F H P + C AFA
Sbjct: 21 LSFPPASQPPPPPTTSSSSSGAGAGASFQVHHASHP---YPCAAFA 63
>05_07_0020 +
27097140-27097676,27097857-27098036,27099361-27099456,
27099557-27099706,27099794-27099925
Length = 364
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = +1
Query: 202 ITRTRHIPTKMRDPLHVPSQNHSRSRLLPPPPGKSREEGLTRP 330
+T HI + + D P + LLPPPP G P
Sbjct: 189 VTMREHISSSLMDSPPFPDMPLLNADLLPPPPSGRHRHGYRHP 231
>10_08_0254 +
16236689-16236793,16237760-16237808,16237988-16238076,
16238178-16238234,16238684-16238746,16238828-16238893,
16239520-16239606,16239691-16239784,16240351-16240673,
16241022-16241048,16241065-16241145,16241445-16241476,
16242126-16242266,16242455-16242516,16243170-16243387
Length = 497
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 223 PTKMRDPLHVPSQNHSRSRLLPPPP 297
P + P H+P Q H R + PPPP
Sbjct: 277 PQNTQLPPHMPPQMHYRPAVRPPPP 301
>10_04_0005 +
7390697-7390705,7390943-7391096,7391225-7391424,
7391649-7391739,7392042-7392385
Length = 265
Score = 28.3 bits (60), Expect = 3.5
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Frame = +3
Query: 126 RDRGRTQTEIEGCSPLPVPFDRQSVHHANATHPHQDAGSPPCAVTKSLPLPAPSSTAREI 305
R + +T+ +E PLP P + + A A P + PP +T L + +I
Sbjct: 83 RVQRKTKRRVELIFPLPPPPEEEKKEEAPAPPPEEKKEEPPKTITVILKVQMHCDACAQI 142
Query: 306 AR------GGVDAALTALNRGLPV 359
+ GV++ T L GL V
Sbjct: 143 LQKRISRTEGVESVETDLLNGLVV 166
>08_01_1030 + 10431485-10432390
Length = 301
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/53 (26%), Positives = 21/53 (39%)
Frame = +3
Query: 168 PLPVPFDRQSVHHANATHPHQDAGSPPCAVTKSLPLPAPSSTAREIARGGVDA 326
P PVPFD H +H + GS ++ +P P +A +A
Sbjct: 144 PSPVPFDNDHAHRRITSHAVRPGGSAIFVSIENWSVPRPGHGDDHVAAQAAEA 196
>05_04_0114 + 18090593-18092248
Length = 551
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -2
Query: 370 KRVATGKPRLSAVRA-ASTPPLAISLAVEEGAGSGSDFV-TAHGG 242
+ VA G ++A RA AST LA + G G+G+ + AHGG
Sbjct: 442 RMVAAGFSPVTAARALASTETLAQQMVAAGGGGAGAGVLRAAHGG 486
>03_02_1015 + 13225092-13225625
Length = 177
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1
Query: 181 LLTDRASITRTRHIPTKMRDPLHVPSQNHSRSRLLPPPPGKSREEGLT 324
++ DR I R P +MR PL + + + + LPPPP K R+ G T
Sbjct: 99 MMLDRVPIAPPRLAP-EMRTPLLLVATS---APALPPPPTKQRDAGGT 142
>07_01_0139 -
1014952-1015165,1015271-1015350,1015420-1015629,
1015925-1016044,1016650-1016709,1017129-1017204,
1018189-1018352,1018428-1018490,1018815-1018902,
1018997-1019647,1019965-1020449
Length = 736
Score = 27.9 bits (59), Expect = 4.6
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +3
Query: 114 NG*PRDRGRTQTEIEGCSPLPVPFDRQ-SVHHANATH-PHQDAGSPPCAVTKSLPLPAP 284
N P RGR T P+ +P R S A H P A + V LPLP+P
Sbjct: 85 NSSPPPRGRASTSAAVGHPVSIPIARSASSAEFRAVHQPPPRAATAASPVLLPLPLPSP 143
>05_04_0007 + 17092818-17093867
Length = 349
Score = 27.9 bits (59), Expect = 4.6
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Frame = +3
Query: 177 VPFDRQSVHHANATHPHQDAG--SPPCA---VTKSLPLPAPSSTAREIARGGVDAAL 332
VP + S HH PHQ G PP A + + L A AR +A G +A +
Sbjct: 197 VPTAKGSKHHGGGKKPHQGHGKKQPPAAAASMRRGLFDAADGEMARRVAMEGPEATV 253
>04_03_0212 +
12697854-12698549,12698655-12698930,12698991-12699038,
12699659-12699715,12700965-12701163,12702267-12702373,
12702586-12702759,12702844-12703083,12703638-12703693,
12704499-12704622
Length = 658
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -2
Query: 349 PRLSAVRAASTPPLAISLAVEEGAGSGSDFVTAHGGDPASWW 224
PRL+A + PPLAIS +G G G GG WW
Sbjct: 34 PRLAA-NLSRPPPLAISSPGCDGGGGGGG-----GGGGGGWW 69
>12_02_0875 -
23920023-23920967,23921045-23921599,23921678-23922083,
23922175-23922452
Length = 727
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +3
Query: 219 HPHQDAGSPPCAVTKSLPLPAPSSTAREIARGGV---DAALTALNRGLPVATR 368
H ++ SP ++T PL RE+A+GG+ A A +RG P R
Sbjct: 660 HHCRNPSSPAISLTIFPPLAEAQGRRREVAQGGILRAVAVAAAAHRGAPPEPR 712
>12_01_0982 +
9945920-9946066,9946185-9946254,9946481-9946526,
9947009-9947068,9947484-9947775
Length = 204
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 271 RSRLLPPPPGKSREEGL 321
RS +PPPP SR +GL
Sbjct: 124 RSNFVPPPPSPSRRQGL 140
>10_06_0020 - 9693126-9693437,9694940-9695368
Length = 246
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 298 LAVEEGAGSGSDFVTAHGGDP--ASWWGCVA 212
LAV A S D HGGD A+WW VA
Sbjct: 174 LAVRTAAASAGDGGGGHGGDVELAAWWRRVA 204
>05_01_0403 + 3179513-3179570,3181576-3181737,3182721-3182920
Length = 139
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Frame = -2
Query: 388 MLYR*TKRVATGKPRLSAVRAASTPPLAISLAVEEGAGS---GSDFVTAHGGDPASW 227
M Y + G R A T PLA +L +G GSDFVT + SW
Sbjct: 39 MFYPGKPVMEVGSSDFPNARTAMTSPLAKALFAIDGVTRVFFGSDFVTVTKSEETSW 95
>04_04_1676 -
35302498-35302836,35302911-35302997,35303063-35303286,
35303375-35303675,35303762-35303860,35304895-35305032,
35305108-35305326
Length = 468
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = +3
Query: 183 FDRQSVHHANATHPHQDAGSPPCAVTKSLPLPAPSSTAREIARGGVDAALTAL 341
F S+ A P A SPP A P APSS E +AA +A+
Sbjct: 361 FGSCSLSSPPAAPPKMAAASPPAAAPAPAPEMAPSSPPAEPPETATEAAGSAV 413
>04_04_1555 +
34376612-34376887,34377306-34377450,34377891-34378000,
34378121-34378418,34378591-34379006
Length = 414
Score = 27.5 bits (58), Expect = 6.0
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Frame = +3
Query: 138 RTQTEIEGCSP---LPVPFDRQSVHHANATHPHQDAGSPPCAVTKSLP----LPAPSSTA 296
R E E SP P+ S+ HA A + AGSP + K LP LPA SS A
Sbjct: 301 RQHDEHEMVSPGKETPISHSDGSIGHAGANLANSGAGSP---IVKDLPTVEELPAESSVA 357
Query: 297 REIARGGVDAALTALNRGLP 356
+ A + + LP
Sbjct: 358 TNLPSAEELPAESPIANNLP 377
>03_05_1166 - 30876802-30876899,30877233-30878685
Length = 516
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 244 LHVPSQNHSRSRLLPPPPGKSREEGLTRPS 333
L P ++ S LLPPPP RE+ PS
Sbjct: 211 LWTPPKSSSPPTLLPPPPPPPREKMYPNPS 240
>03_02_0385 - 7980287-7981267
Length = 326
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 274 SRLLPPPPGKSREEGLTRPSRHSIAVYRWPRASSNGIT 387
+RLLPP P +G+ P+R + P +NG T
Sbjct: 23 ARLLPPAPAGEPVDGVNGPARRIVHSNDAPLNDANGTT 60
>02_04_0391 + 22576839-22577387
Length = 182
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = +1
Query: 199 SITRTRHI---PTKMRDPLHVPSQNHSRSRLLPPPP 297
S + +H+ PT + L P+ H + +LL PPP
Sbjct: 46 SFNKQKHVEIQPTNKLEQLIQPTNEHEQQQLLQPPP 81
>10_08_0114 -
14911119-14911301,14911458-14911550,14911634-14911678,
14911831-14911953,14912090-14912177,14912976-14913118
Length = 224
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -2
Query: 328 AASTPPLAISLAVEEGAGSGSDFVTAHGGDP 236
AA+ P+A+ L G G G V G +P
Sbjct: 3 AAAVDPMALGLGTSGGGGGGESAVGGDGAEP 33
>10_01_0042 + 562246-563550
Length = 434
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -2
Query: 373 TKRVATGKPRLSAVRAASTPPLAISLAVEEGAGSGSDFVTAHGGD 239
T RV T PR+ ++ P + A EEG SD VTA D
Sbjct: 377 TARVMTYPPRMLSMMPRIAPICFMLKATEEGVRVMSDCVTADHAD 421
>07_03_1778 +
29451902-29452166,29452665-29452849,29453504-29453693,
29453990-29454168,29454263-29454314,29454426-29454553,
29454920-29455099,29455209-29455276,29455364-29455506,
29455682-29455743,29455874-29455987,29456180-29456320,
29456680-29456832,29456973-29457026,29457102-29457212,
29457339-29457512,29457600-29457680,29457788-29457886,
29457905-29458057
Length = 843
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 190 DRASITRTRHIPTKMRDPLHVPSQNHSRSRLLPPPPG 300
DR R RH+ D P ++H R LP PPG
Sbjct: 43 DRDHRRRNRHLLDADDDDDDDPPRDHDRRTTLPIPPG 79
>06_03_0366 - 19928681-19928944
Length = 87
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 289 EEGAGSGSDFVTAHGGDPASWWG 221
+ AG G D GGD A+W G
Sbjct: 49 DAAAGRGGDAAAGRGGDAAAWGG 71
>06_03_0332 + 19652207-19652995
Length = 262
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 150 EIEGCSPLPVPFDRQSVHHANATHPHQDAGSPPCAVTKSLPLPAPSSTAREIARGGVDAA 329
++ C+P P P + + A+ + + D S A ++S P P SST ++A +DAA
Sbjct: 165 QLRRCAPSP-PKEAAAAAAADTSRANDDDSS--AAASRS-PSPIRSSTRFDLAAAAIDAA 220
>05_04_0129 - 18283862-18284328,18284382-18284580
Length = 221
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 352 KPRLSAVRAASTPPLAISLAVEEGAGSGSD 263
+PR S AS+PP+ E+G G G D
Sbjct: 147 RPRSSHPPPASSPPMPDQAEEEDGGGDGDD 176
>04_03_1028 -
21827961-21827972,21828018-21828112,21828286-21828361,
21828921-21829037,21829532-21829621,21830011-21830056,
21831407-21831502,21831599-21832008
Length = 313
Score = 27.1 bits (57), Expect = 8.0
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 223 PTKMR-DPLHVPSQNHSRSRLLPPPPGKSREEGLTRPSRHSIAVYRWP 363
P K R P P++ SRSR P G+SR +R SR A R+P
Sbjct: 48 PRKRRLSPTPSPTRRSSRSRSRSPRRGRSRSRSRSR-SRGRSASPRYP 94
>02_01_0362 +
2607097-2607371,2607766-2608612,2608842-2608910,
2609968-2610202,2610454-2610536,2610924-2611046,
2611326-2611379
Length = 561
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 165 SPLPVPFDRQSVHHANATH-PHQDAGS--PPCA 254
SP+PV FD+ V + A+ PH +GS PP A
Sbjct: 387 SPVPVFFDKDKVRQSPASRMPHGRSGSAQPPAA 419
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,757,549
Number of Sequences: 37544
Number of extensions: 346237
Number of successful extensions: 1845
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1837
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 999806640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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