Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_M20
         (769 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.4  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    23   3.1  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   7.2  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   9.5  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   9.5  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    21   9.5  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 192  TAAMSSGATRA*RTASPGSPQCAAPAVSPSISTVKLVIGK 311
            +AA + G   A   +SPG  + A+PA S + S    ++GK
Sbjct: 904  SAAFAQGFATA--ASSPGLLERASPAFSGTSSPTNSLVGK 941


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 101 DDDGAGDEPNADQLCDGRPAD 163
           DDDG  D+ +  +  +G+PA+
Sbjct: 394 DDDGDDDDDDDVEAANGKPAE 414


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 96  RFTREVLHTSEPTNNTPRHRNACRAMAPRRR 4
           R  RE    +EP NN P + +  R   PR R
Sbjct: 86  RLRREAELEAEPGNNRPVYISQPRPPHPRLR 116



 Score = 21.8 bits (44), Expect = 7.2
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 96  RFTREVLHTSEPTNNTPRHRNACRAMAPRRR 4
           R  RE    +EP NN P + +  R   PR R
Sbjct: 142 RLRREAELEAEPGNNRPVYISQPRPPHPRLR 172



 Score = 21.4 bits (43), Expect = 9.5
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -2

Query: 96  RFTREVLHTSEPTNNTPRHRNACRAMAPRRR 4
           R  RE    +EP NN P +    R   PR R
Sbjct: 30  RLRREAKPEAEPGNNRPVYIPQPRPPHPRLR 60


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -2

Query: 96  RFTREVLHTSEPTNNTPRHRNACRAMAPRRR 4
           R  RE    +EP NN P +    R   PR R
Sbjct: 31  RLRREAKPEAEPGNNRPIYIPQPRPPHPRLR 61



 Score = 21.4 bits (43), Expect = 9.5
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -2

Query: 96  RFTREVLHTSEPTNNTPRHRNACRAMAPRRR 4
           R  RE    +EP NN P +    R   PR R
Sbjct: 87  RLRREAESEAEPGNNRPVYIPQPRPPHPRLR 117


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 308 KTNVKNCDQIEKPRKVL 358
           ++NV+ C+Q+EK    L
Sbjct: 802 RSNVQQCEQLEKAPNTL 818


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
          protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -2

Query: 96 RFTREVLHTSEPTNNTPRHRNACRAMAPRRR 4
          R  RE    +EP NN P +    R   PR R
Sbjct: 2  RLRREAKPEAEPGNNRPVYIPQPRPPHPRLR 32



 Score = 21.4 bits (43), Expect = 9.5
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -2

Query: 96  RFTREVLHTSEPTNNTPRHRNACRAMAPRRR 4
           R  RE    +EP NN P +    R   PR R
Sbjct: 142 RLRREAKPEAEPGNNRPVYIPQPRPPHPRLR 172


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,391
Number of Sequences: 438
Number of extensions: 4794
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)