Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_M19
         (822 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   5.1  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   5.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.9  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   8.9  

>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 15/55 (27%), Positives = 21/55 (38%)
 Frame = -1

Query: 693 YSRISENT*LPRIQSQSKGTSPTQFLGQY*TGVPKHQYTDCTGPHTSLFGSLQPS 529
           YS  S +   P+  S S  TSP   +  Y +    H          +  GS+ PS
Sbjct: 35  YSSSSPSGSSPQHSSSSASTSPAARMYPYVSAAHHHHQAAAAAFGAAASGSMVPS 89


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 15/55 (27%), Positives = 21/55 (38%)
 Frame = -1

Query: 693 YSRISENT*LPRIQSQSKGTSPTQFLGQY*TGVPKHQYTDCTGPHTSLFGSLQPS 529
           YS  S +   P+  S S  TSP   +  Y +    H          +  GS+ PS
Sbjct: 35  YSSSSPSGSSPQHSSSSASTSPAARMYPYVSAAHHHHQAAAAAFGAAASGSMVPS 89


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +3

Query: 411  NMDLHYIRPNGVDLRSFDDQVPEDTRTFDHVNFNQN 518
            N  +HY    G D R     +P   ++F   + NQN
Sbjct: 2045 NFTIHYWIEKGADRRKLVMGMPMYGQSFSLADNNQN 2080


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 160 VHAAIXVP*VGLITLITAVLTRXAIVAN 77
           VH  I V  +G + ++  ++   AI+AN
Sbjct: 404 VHRKIMVQSLGRVGVLVVIIGTLAIIAN 431


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 160 VHAAIXVP*VGLITLITAVLTRXAIVAN 77
           VH  I V  +G + ++  ++   AI+AN
Sbjct: 129 VHRKIMVQSLGRVGVLVVIIGTLAIIAN 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,561
Number of Sequences: 336
Number of extensions: 4110
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)