Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_M19
         (822 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051764-1|AAK93188.1|  407|Drosophila melanogaster LD29280p pro...   242   5e-64
AE014297-3086|AAN13899.1|  407|Drosophila melanogaster CG6343-PB...   242   5e-64
AE014297-3085|AAF55947.1|  407|Drosophila melanogaster CG6343-PA...   242   5e-64
Y10911-1|CAA71852.1|  161|Drosophila melanogaster NADH-ubiquinon...   180   2e-45
AE014297-3352|AAF56159.2|  350|Drosophila melanogaster CG16710-P...    31   1.4  
AY071681-1|AAL49303.2|  128|Drosophila melanogaster RH08487p pro...    31   2.5  

>AY051764-1|AAK93188.1|  407|Drosophila melanogaster LD29280p
           protein.
          Length = 407

 Score =  242 bits (592), Expect = 5e-64
 Identities = 118/225 (52%), Positives = 153/225 (68%)
 Frame = +3

Query: 141 TXIAACTFVQNRNISGRAMREALXXXXXXXXXFDYVNKDYTWLRSLIDRTTHRFDDNSKV 320
           T      F Q  +ISG+ MR            + Y  K Y+   ++ D+T+ RFD+NSKV
Sbjct: 27  TNALPAAFQQRCSISGKTMRGG--PRVPKAAPYPYKTKKYSVFNAIFDKTSKRFDENSKV 84

Query: 321 IIVEGPIAAGKTAFAASLADDLGMKHFPEANMDLHYIRPNGVDLRSFDDQVPEDTRTFDH 500
           I VEGPIAAGK+ FA  LA++L M+++P  ++DL YI   G D+R  D Q+P   R++D 
Sbjct: 85  ICVEGPIAAGKSKFAKELAEELDMEYYPAVDLDLIYINSYGYDMRKLDPQLPPSCRSYDV 144

Query: 501 VNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAMYSQ 680
            NF  +P+H LAA FQI MY+ RYSQYIDAL H+ +TGQG+VLERSPYSDFVF+EAM+ Q
Sbjct: 145 RNFCLDPSHDLAAQFQIRMYMLRYSQYIDALQHVLSTGQGVVLERSPYSDFVFMEAMFRQ 204

Query: 681 KFLSKAVRSTYYELRENTIEELMRPHLXIYLDLPVSKVQXAIKKR 815
            +LS+  RS Y ELR+NTI EL++PHL IYLDLPV  V+  IK R
Sbjct: 205 GYLSRGARSVYNELRQNTIGELLKPHLVIYLDLPVDAVKKQIKAR 249


>AE014297-3086|AAN13899.1|  407|Drosophila melanogaster CG6343-PB,
           isoform B protein.
          Length = 407

 Score =  242 bits (592), Expect = 5e-64
 Identities = 118/225 (52%), Positives = 153/225 (68%)
 Frame = +3

Query: 141 TXIAACTFVQNRNISGRAMREALXXXXXXXXXFDYVNKDYTWLRSLIDRTTHRFDDNSKV 320
           T      F Q  +ISG+ MR            + Y  K Y+   ++ D+T+ RFD+NSKV
Sbjct: 27  TNALPAAFQQRCSISGKTMRGG--PRVPKAAPYPYKTKKYSVFNAIFDKTSKRFDENSKV 84

Query: 321 IIVEGPIAAGKTAFAASLADDLGMKHFPEANMDLHYIRPNGVDLRSFDDQVPEDTRTFDH 500
           I VEGPIAAGK+ FA  LA++L M+++P  ++DL YI   G D+R  D Q+P   R++D 
Sbjct: 85  ICVEGPIAAGKSKFAKELAEELDMEYYPAVDLDLIYINSYGYDMRKLDPQLPPSCRSYDV 144

Query: 501 VNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAMYSQ 680
            NF  +P+H LAA FQI MY+ RYSQYIDAL H+ +TGQG+VLERSPYSDFVF+EAM+ Q
Sbjct: 145 RNFCLDPSHDLAAQFQIRMYMLRYSQYIDALQHVLSTGQGVVLERSPYSDFVFMEAMFRQ 204

Query: 681 KFLSKAVRSTYYELRENTIEELMRPHLXIYLDLPVSKVQXAIKKR 815
            +LS+  RS Y ELR+NTI EL++PHL IYLDLPV  V+  IK R
Sbjct: 205 GYLSRGARSVYNELRQNTIGELLKPHLVIYLDLPVDAVKKQIKAR 249


>AE014297-3085|AAF55947.1|  407|Drosophila melanogaster CG6343-PA,
           isoform A protein.
          Length = 407

 Score =  242 bits (592), Expect = 5e-64
 Identities = 118/225 (52%), Positives = 153/225 (68%)
 Frame = +3

Query: 141 TXIAACTFVQNRNISGRAMREALXXXXXXXXXFDYVNKDYTWLRSLIDRTTHRFDDNSKV 320
           T      F Q  +ISG+ MR            + Y  K Y+   ++ D+T+ RFD+NSKV
Sbjct: 27  TNALPAAFQQRCSISGKTMRGG--PRVPKAAPYPYKTKKYSVFNAIFDKTSKRFDENSKV 84

Query: 321 IIVEGPIAAGKTAFAASLADDLGMKHFPEANMDLHYIRPNGVDLRSFDDQVPEDTRTFDH 500
           I VEGPIAAGK+ FA  LA++L M+++P  ++DL YI   G D+R  D Q+P   R++D 
Sbjct: 85  ICVEGPIAAGKSKFAKELAEELDMEYYPAVDLDLIYINSYGYDMRKLDPQLPPSCRSYDV 144

Query: 501 VNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAMYSQ 680
            NF  +P+H LAA FQI MY+ RYSQYIDAL H+ +TGQG+VLERSPYSDFVF+EAM+ Q
Sbjct: 145 RNFCLDPSHDLAAQFQIRMYMLRYSQYIDALQHVLSTGQGVVLERSPYSDFVFMEAMFRQ 204

Query: 681 KFLSKAVRSTYYELRENTIEELMRPHLXIYLDLPVSKVQXAIKKR 815
            +LS+  RS Y ELR+NTI EL++PHL IYLDLPV  V+  IK R
Sbjct: 205 GYLSRGARSVYNELRQNTIGELLKPHLVIYLDLPVDAVKKQIKAR 249


>Y10911-1|CAA71852.1|  161|Drosophila melanogaster NADH-ubiquinone
           oxidoreductase42 kDa subunit protein.
          Length = 161

 Score =  180 bits (439), Expect = 2e-45
 Identities = 83/148 (56%), Positives = 109/148 (73%)
 Frame = +3

Query: 237 FDYVNKDYTWLRSLIDRTTHRFDDNSKVIIVEGPIAAGKTAFAASLADDLGMKHFPEANM 416
           + Y  K Y+   ++ D+T+ RFD+NSKVI VEGPIAAGK+ FA  LA++L M+++P  ++
Sbjct: 13  YPYKTKKYSVFNAIFDKTSKRFDENSKVICVEGPIAAGKSKFAKELAEELDMEYYPAVDL 72

Query: 417 DLHYIRPNGVDLRSFDDQVPEDTRTFDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALA 596
           DL YI   G D+R  D Q+P   R++D  NF  +P+H LAA FQI MY+ RYSQYIDAL 
Sbjct: 73  DLIYINSYGYDMRKLDPQLPPSCRSYDVRNFCLDPSHDLAAQFQIRMYMLRYSQYIDALQ 132

Query: 597 HLFNTGQGIVLERSPYSDFVFLEAMYSQ 680
            + +TGQG+VLERSPYSDFVFLEAM+ Q
Sbjct: 133 RVLSTGQGVVLERSPYSDFVFLEAMFRQ 160


>AE014297-3352|AAF56159.2|  350|Drosophila melanogaster CG16710-PA
           protein.
          Length = 350

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 524 PSLGCKLPNNDVCGPVQSVY*CFG 595
           P++G  LPN  +CGP+   Y  FG
Sbjct: 85  PNMGHILPNTQICGPIMPAYRIFG 108


>AY071681-1|AAL49303.2|  128|Drosophila melanogaster RH08487p
           protein.
          Length = 128

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = -1

Query: 414 C*LRGNASYPSHQLGRLQRRSYQQLSALPRLSLCCYHQTCGS 289
           C +  + S+PS QL  L  R Y  L AL  L++CC    CG+
Sbjct: 10  CSVLSSCSWPSFQLLGLMAR-YTYLVALVLLAICCQWGYCGA 50


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,963,397
Number of Sequences: 53049
Number of extensions: 708254
Number of successful extensions: 2066
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2063
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)