Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_M19
(822 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21320-3|AAA62532.1| 436|Caenorhabditis elegans Hypothetical pr... 161 7e-40
U21320-4|AAM54175.1| 188|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 33 0.33
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 33 0.33
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 33 0.33
U64846-2|AAG24112.1| 332|Caenorhabditis elegans Serpentine rece... 31 0.75
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z79639-3|CAB01918.1| 385|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 4.0
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 29 4.0
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 4.0
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 9.3
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 28 9.3
>U21320-3|AAA62532.1| 436|Caenorhabditis elegans Hypothetical
protein K04G7.4a protein.
Length = 436
Score = 161 bits (390), Expect = 7e-40
Identities = 86/228 (37%), Positives = 127/228 (55%), Gaps = 3/228 (1%)
Frame = +3
Query: 141 TXIAACTF--VQNRNISGRAMREALXXXXXXXXXFDYVNKDYTWLRSLIDRTTHRFDDNS 314
T + AC+ + + G + L +DY + + ++ L D T F NS
Sbjct: 13 TGLLACSRSGALSNQVRGVVHKSLLRLPSEHPEPWDYKHNGFNYIDGLKDDTRSHFHQNS 72
Query: 315 KVIIVEGPIAAGKTAFAASLADDLGMKHFPEANMDLHYIRPNGVDLRSFDDQVPEDTRTF 494
K+I+VEG I +GKT A LAD LG HFPE MD + G DLR++ ++ P R
Sbjct: 73 KLIVVEGNIGSGKTTLAKQLADQLGFVHFPEFRMDDILVDRYGNDLRNYYNKFPARYRLP 132
Query: 495 DHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAMY 674
D F +NP+ L+A Q ++ R+ QY++ALAH+ NTGQG+VLER+P+SDFVF AM
Sbjct: 133 DISMFYKNPSGELSAAMQDRIFNCRFDQYLNALAHILNTGQGVVLERTPHSDFVFANAMR 192
Query: 675 SQKFLSKAVRSTYYELRENTIEEL-MRPHLXIYLDLPVSKVQXAIKKR 815
+ ++ YY +R+N + +L PHL +YL+ P +K IK+R
Sbjct: 193 DKNYIGHEYFKHYYFVRKNALPQLHFWPHLVVYLNTPTNKCLENIKRR 240
>U21320-4|AAM54175.1| 188|Caenorhabditis elegans Hypothetical
protein K04G7.4b protein.
Length = 188
Score = 69.7 bits (163), Expect = 2e-12
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Frame = +3
Query: 141 TXIAACTF--VQNRNISGRAMREALXXXXXXXXXFDYVNKDYTWLRSLIDRTTHRFDDNS 314
T + AC+ + + G + L +DY + + ++ L D T F NS
Sbjct: 13 TGLLACSRSGALSNQVRGVVHKSLLRLPSEHPEPWDYKHNGFNYIDGLKDDTRSHFHQNS 72
Query: 315 KVIIVEGPIAAGKTAFAASLADDLGMKHFPEANMDLHYIRPNGVDLRSFDDQVPEDTRTF 494
K+I+VEG I +GKT A LAD LG HFPE MD + G DLR++ +++ +TF
Sbjct: 73 KLIVVEGNIGSGKTTLAKQLADQLGFVHFPEFRMDDILVDRYGNDLRNYYNKLVTVFQTF 132
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 32.7 bits (71), Expect = 0.33
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 330 PRLSLCCYHQTCGSCGRLSCATKCSPC 250
PR CC + C +C R C T+C C
Sbjct: 71 PRCCCCCRPKCCCTCCRTCCCTRCCTC 97
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 32.7 bits (71), Expect = 0.33
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 330 PRLSLCCYHQTCGSCGRLSCATKCSPC 250
PR CC + C +C R C T+C C
Sbjct: 73 PRCCCCCRPKCCCTCCRTCCCTRCCTC 99
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 32.7 bits (71), Expect = 0.33
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 330 PRLSLCCYHQTCGSCGRLSCATKCSPC 250
PR CC + C +C R C T+C C
Sbjct: 76 PRCCCCCRPKCCCTCCRTCCCTRCCTC 102
>U64846-2|AAG24112.1| 332|Caenorhabditis elegans Serpentine
receptor, class t protein35 protein.
Length = 332
Score = 31.5 bits (68), Expect = 0.75
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Frame = -2
Query: 542 VCSQAMVRILIEINMVKGPSVLGYLVVEGPQV-DAVRTNIVQIHVSFGEMLHTQVIS*GG 366
V SQA I + +N V+ P ++ VV G + + V V I++SF +M+ + + G
Sbjct: 251 VASQAAAIIYVVMNFVQVPPIV---VVSGHLLWELVHGAPVFIYISFNDMIRKRFLEIFG 307
Query: 365 CKGGLTSSY---RPF---HDYHFAV 309
CK +T + P HDY F +
Sbjct: 308 CKNVVTPQFVVSPPVVVQHDYTFMI 332
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 330 PRLSLCCYHQTCGSCGRLSCATKCSPC 250
PR CC + C +C R C T+C C
Sbjct: 91 PRCCCCC--RRCCTCCRTCCCTRCCTC 115
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 315 KVIIVEGPIAAGKTAFAASLADDLG 389
+ +++ GP A GKTA A +++ +LG
Sbjct: 83 RAVLIAGPPATGKTAIALAMSQELG 107
>Z79639-3|CAB01918.1| 385|Caenorhabditis elegans Hypothetical
protein F54E4.4 protein.
Length = 385
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 6/30 (20%)
Frame = -1
Query: 321 SLCCYHQTCGSCGR------LSCATKCSPC 250
SLCC+ T G C R L+CA C C
Sbjct: 260 SLCCFWATTGECSRNPFWMKLNCAKTCGTC 289
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 330 PRLSLCCYHQTCGSCGRLSCATKCSPC 250
PR CC + C +C R C T+C C
Sbjct: 89 PRCCCCC--RRCCTCCRTCCCTRCCTC 113
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 327 RLSLCCYHQTCGSCGRLSCATKCSPC 250
R CC + C +C R C T+C C
Sbjct: 89 RPKCCCCCRRCCTCCRTCCCTRCCTC 114
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 330 PRLSLCCYHQTCGSCGRLSCATKCSPC 250
PR CC + C +C R C T+C C
Sbjct: 90 PRCCCCC--RRCCTCCRTCCCTRCCTC 114
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 330 PRLSLCCYHQTCGSCGRLSCATKCSPC 250
PR CC + C +C R C T+C C
Sbjct: 91 PRCCCCC--RRCCTCCRTCCCTRCCTC 115
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 208 YHLLHRNLHPLTMSTRTTLGCAA*STARPTGLMI 309
Y L + L+P+ + R TL C+A T PT L +
Sbjct: 2855 YFLDQQKLYPIILGKRLTLDCSATGTPPPTILFM 2888
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 208 YHLLHRNLHPLTMSTRTTLGCAA*STARPTGLMI 309
Y L + L+P+ + R TL C+A T PT L +
Sbjct: 2855 YFLDQQKLYPIILGKRLTLDCSATGTPPPTILFM 2888
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 208 YHLLHRNLHPLTMSTRTTLGCAA*STARPTGLMI 309
Y L + L+P+ + R TL C+A T PT L +
Sbjct: 2855 YFLDQQKLYPIILGKRLTLDCSATGTPPPTILFM 2888
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 208 YHLLHRNLHPLTMSTRTTLGCAA*STARPTGLMI 309
Y L + L+P+ + R TL C+A T PT L +
Sbjct: 2855 YFLDQQKLYPIILGKRLTLDCSATGTPPPTILFM 2888
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 208 YHLLHRNLHPLTMSTRTTLGCAA*STARPTGLMI 309
Y L + L+P+ + R TL C+A T PT L +
Sbjct: 2855 YFLDQQKLYPIILGKRLTLDCSATGTPPPTILFM 2888
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,820,855
Number of Sequences: 27780
Number of extensions: 361685
Number of successful extensions: 926
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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