Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_M18
         (731 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.1  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   4.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   4.4  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   4.4  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   4.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.9  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   7.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/43 (25%), Positives = 17/43 (39%)
 Frame = -1

Query: 593  WAPRELHTYHTAVQNRCPIPQNLQVHLGNQSSPCYRHKVGYHR 465
            W P E H        + P+P+ L+   G     CY     ++R
Sbjct: 1369 WQPTEWHPPIPPTSEKPPLPEELKPQSGYFKIVCYFTNWAWYR 1411



 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 183  TQSWPFMATTAPP 145
            T +WP   TT PP
Sbjct: 1076 TTNWPTQGTTIPP 1088


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/51 (23%), Positives = 20/51 (39%)
 Frame = -1

Query: 638 PEPVRLSQRVHLASSWAPRELHTYHTAVQNRCPIPQNLQVHLGNQSSPCYR 486
           P P+   +   +A+SW    ++        R P P  L +   +  S  YR
Sbjct: 173 PYPILSPEMSQVAASWHTPSMYPLSPGAGFRSPYPSALPISTSSLPSDFYR 223


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/51 (23%), Positives = 20/51 (39%)
 Frame = -1

Query: 638 PEPVRLSQRVHLASSWAPRELHTYHTAVQNRCPIPQNLQVHLGNQSSPCYR 486
           P P+   +   +A+SW    ++        R P P  L +   +  S  YR
Sbjct: 65  PYPILSPEMSQVAASWHTPSMYPLSPGAGFRSPYPSALPISTSSLPSDFYR 115


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 428 PYFIEPVIAGLDPY 469
           PYF+  + + +DPY
Sbjct: 132 PYFVNQLFSAVDPY 145


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = -1

Query: 575 HTYHTAVQNRCPIPQNLQVHLGNQSSP---CYRHKVGYHRDLDQL*QVQ*SKGRNVVHTI 405
           H +H   +N+  +  +   HLG  S+P   C  ++   HR  ++  Q      ++V+H +
Sbjct: 126 HQHHFLHENKYQLEVDSGYHLGASSTPTNSCMEYQ-HLHRYKEEALQGDGRMRQHVMHNL 184

Query: 404 S 402
           S
Sbjct: 185 S 185


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = -1

Query: 575 HTYHTAVQNRCPIPQNLQVHLGNQSSP---CYRHKVGYHRDLDQL*QVQ*SKGRNVVHTI 405
           H +H   +N+  +  +   HLG  S+P   C  ++   HR  ++  Q      ++V+H +
Sbjct: 126 HQHHFLHENKYQLEVDSGYHLGASSTPTNSCMEYQ-HLHRYKEEALQGDGRMRQHVMHNL 184

Query: 404 S 402
           S
Sbjct: 185 S 185


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = -1

Query: 575 HTYHTAVQNRCPIPQNLQVHLGNQSSP---CYRHKVGYHRDLDQL*QVQ*SKGRNVVHTI 405
           H +H   +N+  +  +   HLG  S+P   C  ++   HR  ++  Q      ++V+H +
Sbjct: 126 HQHHFLHENKYQLEVDSGYHLGASSTPTNSCMEYQ-HLHRYKEEALQGDGRMRQHVMHNL 184

Query: 404 S 402
           S
Sbjct: 185 S 185


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 587 PRELHTYHTAVQNRCPIPQNLQVH 516
           P  L T+HT  + R   PQNL ++
Sbjct: 254 PSCLETFHTLEKCRPDPPQNLVIN 277


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 467 YDNQPYVCNMDLI 505
           Y+N PY  NMD +
Sbjct: 253 YNNYPYYSNMDYL 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,687
Number of Sequences: 336
Number of extensions: 4314
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)