Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_M14
         (393 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.4  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   4.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   5.8  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    20   7.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    20   7.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   7.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 96  IHIKYIFILYIFVMINNPSIVHDCC 22
           +H+ YIF++ I    +   I H CC
Sbjct: 630 LHLLYIFLVGIMYAADVFYICHVCC 654


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = -1

Query: 213 YNVIVQKRHLF 181
           YN++++K H+F
Sbjct: 42  YNLVIRKEHIF 52


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -1

Query: 105 LLQIHIKYIFILYIFVMINNPSIVHDCCIEDLG 7
           LLQ+   + + +Y+F +      VH+  I + G
Sbjct: 140 LLQLVFVFCYFIYLFTVYYIYYSVHEASIINFG 172


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 146 GFRISXXXXXLEKRWRF 196
           GFR+      L K WRF
Sbjct: 652 GFRLVAFLALLVKTWRF 668


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 146 GFRISXXXXXLEKRWRF 196
           GFR+      L K WRF
Sbjct: 652 GFRLVAFLALLVKTWRF 668


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 130 TEVYLNFNVITN 95
           TEVY +FN + N
Sbjct: 95  TEVYFSFNSVRN 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,848
Number of Sequences: 336
Number of extensions: 1146
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8330471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)