BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_M14
(393 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021463-1|AAX33611.1| 1057|Drosophila melanogaster AT15593p pro... 27 6.7
AE014134-2863|AAF53626.1| 4010|Drosophila melanogaster CG5526-PA... 27 6.7
>BT021463-1|AAX33611.1| 1057|Drosophila melanogaster AT15593p
protein.
Length = 1057
Score = 27.5 bits (58), Expect = 6.7
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 139 LEGISNIEKKKEIRKKMAFLHNHIIFVKYLQVC 237
+ I N EK +I ++ L NH + Y+ +C
Sbjct: 258 MSSIDNTEKVDDIAARLLDLRNHFTYSLYVNIC 290
>AE014134-2863|AAF53626.1| 4010|Drosophila melanogaster CG5526-PA
protein.
Length = 4010
Score = 27.5 bits (58), Expect = 6.7
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 139 LEGISNIEKKKEIRKKMAFLHNHIIFVKYLQVC 237
+ I N EK +I ++ L NH + Y+ +C
Sbjct: 3211 MSSIDNTEKVDDIAARLLDLRNHFTYSLYVNIC 3243
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,424,227
Number of Sequences: 53049
Number of extensions: 173346
Number of successful extensions: 258
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 258
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1107890535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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