Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_M12
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.12 
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   2.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.4  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.9  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = -2

Query: 731 IICYYNFSFCIIMIF-VDIIFSFIF-YFNWHLI 639
           ++C Y+F FC  +IF + ++F   F +FN HL+
Sbjct: 163 LLCIYHF-FCAFIIFTMHLLFCCAFIFFNMHLL 194



 Score = 25.4 bits (53), Expect = 0.49
 Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = -2

Query: 731 IICYYNFSFCIIMIFVDIIFSF-IFYFNW-HLINICSY 624
           ++C Y F +  I+  V ++    I+YF + HL+  C++
Sbjct: 235 LLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAF 272


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -3

Query: 472 LKAFSNSELLRSSYFH-QPFLPS*YHWNPSTPSTLAAY*R 356
           L AF  +  L + Y   QPF P  Y + P T + LAAY R
Sbjct: 187 LAAFKRTIALGAFYQPLQPFPPP-YPFYPGTSAMLAAYQR 225


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 462  FLIQSCYAHHISTNHF 415
            F+ +  Y HH+S  HF
Sbjct: 1063 FISKGAYRHHLSKMHF 1078


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 481 NQSVLYYWLGLCTL 522
           N +  YYWL +C L
Sbjct: 50  NTNRKYYWLNVCCL 63


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -1

Query: 240 HDRRIVLLDVDIFASKQHNHIPYYVR 163
           H  RIV +  +IF     NH   Y R
Sbjct: 11  HSVRIVFVQSEIFCLVNFNHRESYFR 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,376
Number of Sequences: 336
Number of extensions: 3942
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)