Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_M11
(824 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0333 + 20333243-20333329,20335048-20335110,20335276-203353... 261 4e-70
05_03_0407 + 13582595-13582681,13583067-13583129,13583289-135833... 260 1e-69
03_02_0544 - 9362615-9362674,9362783-9362857,9362934-9363144,936... 259 2e-69
07_01_1091 - 10015180-10015236,10015705-10015779,10015874-100161... 244 9e-65
01_01_1165 - 9267891-9268145,9268395-9268510,9268991-9269127,926... 55 6e-08
12_02_1229 + 27197464-27197481,27200438-27201583,27201935-272022... 47 2e-05
01_05_0559 + 23281408-23282457,23282580-23282942,23283938-232839... 31 1.1
02_01_0206 + 1388149-1388330,1388527-1388629,1388896-1388964,138... 31 1.5
08_02_0456 - 17362080-17364156,17364853-17364942,17372615-173733... 29 3.4
11_01_0151 - 1263237-1263406,1267405-1267646,1267681-1267781,126... 29 4.5
08_01_1077 - 11027732-11027839,11028346-11028477,11029722-110298... 29 4.5
02_04_0468 - 23172561-23174201 29 5.9
01_06_0404 + 29098141-29098214,29098459-29098673,29099491-290995... 29 5.9
07_03_0288 + 16285485-16285721,16285811-16286184,16286499-162868... 28 7.8
03_06_0165 - 32108697-32109788 28 7.8
>05_04_0333 +
20333243-20333329,20335048-20335110,20335276-20335359,
20335720-20335827,20335969-20336141,20337135-20337246,
20337468-20337548,20337635-20337697,20337779-20337880,
20338070-20338194,20338317-20338527,20338625-20338699,
20338990-20339043
Length = 445
Score = 261 bits (640), Expect = 4e-70
Identities = 125/214 (58%), Positives = 156/214 (72%), Gaps = 1/214 (0%)
Frame = +1
Query: 115 MDEAYXVIVLGTGLKXCILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAP- 291
MDE Y VIVLGTGLK CILSG+LSV G KVLH+DRN YYGG+S S+ L +L+ +F
Sbjct: 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKRFRGED 59
Query: 292 APDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKVP 471
P G RD+NVD++PKF+MANG LV+ LIHT VT+YL FK+++GSYV+ GKI KVP
Sbjct: 60 KPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVP 119
Query: 472 VDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTANMQSLYDKFGLDRN 651
EAL S LMG+FEKRR RNF IYVQD+ E D KT + D +T + L K+GL +
Sbjct: 120 ATDMEALKSPLMGLFEKRRARNFFIYVQDYDEADPKTHQGLDLTTMTTRELIAKYGLSDD 179
Query: 652 TQDFTGHALALYLDDNYLQQPAIQTIRRIKLYSD 753
T DF GHALAL+ DD YL +PAI T++R+KLY++
Sbjct: 180 TVDFIGHALALHRDDRYLNEPAIDTVKRMKLYAE 213
>05_03_0407 +
13582595-13582681,13583067-13583129,13583289-13583372,
13583757-13583864,13584018-13584190,13585190-13585301,
13585424-13585504,13585611-13585673,13585764-13585865,
13586063-13586187,13586316-13586526,13586614-13586688,
13586950-13587003
Length = 445
Score = 260 bits (637), Expect = 1e-69
Identities = 124/214 (57%), Positives = 156/214 (72%), Gaps = 1/214 (0%)
Frame = +1
Query: 115 MDEAYXVIVLGTGLKXCILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAP- 291
MDE Y VIVLGTGLK CILSG+LSV G KVLH+DRN YYGG+S S+ L +L+ +F
Sbjct: 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKRFRGED 59
Query: 292 APDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKVP 471
P G +D+NVD++PKF+MANG LV+ LIHT VT+YL FK+++GSYV+ GKI KVP
Sbjct: 60 KPPAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVP 119
Query: 472 VDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTANMQSLYDKFGLDRN 651
EAL S LMG+FEKRR RNF IYVQD+ E D KT + D +T + L K+GL +
Sbjct: 120 ATDMEALKSPLMGLFEKRRARNFFIYVQDYNEADPKTHQGLDLTTMTTRELIAKYGLSDD 179
Query: 652 TQDFTGHALALYLDDNYLQQPAIQTIRRIKLYSD 753
T DF GHALAL+ DD YL +PAI T++R+KLY++
Sbjct: 180 TVDFIGHALALHRDDRYLNEPAIDTVKRMKLYAE 213
>03_02_0544 -
9362615-9362674,9362783-9362857,9362934-9363144,
9363279-9363403,9363492-9363593,9363676-9363738,
9363817-9363897,9364248-9364359,9364454-9364626,
9364722-9364829,9364909-9364992,9365131-9365193,
9365652-9365738
Length = 447
Score = 259 bits (635), Expect = 2e-69
Identities = 123/215 (57%), Positives = 162/215 (75%), Gaps = 2/215 (0%)
Frame = +1
Query: 115 MDEAYXVIVLGTGLKXCILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKF--NA 288
MDE Y VIVLGTGLK CI+SG+LSV G KVLH+DRN YYGGES S+ L +L+ +F N
Sbjct: 1 MDEEYDVIVLGTGLKECIISGLLSVDGLKVLHMDRNDYYGGESTSLN-LTKLWKRFKGNE 59
Query: 289 PAPDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKV 468
AP E G +++NVD++PKF+MANG LV++LIHT VT+YL FK+++GS+VY GKI KV
Sbjct: 60 TAP-EHLGVSKEYNVDMVPKFMMANGALVRVLIHTSVTKYLNFKAVDGSFVYNNGKIHKV 118
Query: 469 PVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTANMQSLYDKFGLDR 648
P EAL S+LMG+FEKRR R F IYVQD++E+D K+ + D + + K+GL+
Sbjct: 119 PATDVEALKSNLMGLFEKRRARKFFIYVQDYEEDDPKSHEGLDLHKVTTREVISKYGLED 178
Query: 649 NTQDFTGHALALYLDDNYLQQPAIQTIRRIKLYSD 753
+T DF GHALAL+ DDNYL +PAI T++R+KLY++
Sbjct: 179 DTVDFIGHALALHRDDNYLDEPAIDTVKRMKLYAE 213
>07_01_1091 -
10015180-10015236,10015705-10015779,10015874-10016149,
10016204-10016332,10017070-10017171,10017626-10017688,
10017776-10017856,10018218-10018314,10019064-10019236,
10019327-10019434,10019706-10019789,10019985-10020047,
10020483-10020569
Length = 464
Score = 244 bits (596), Expect = 9e-65
Identities = 117/206 (56%), Positives = 148/206 (71%), Gaps = 1/206 (0%)
Frame = +1
Query: 115 MDEAYXVIVLGTGLKXCILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPA 294
MD Y VIVLGTGLK CILSG+LSV KVLH+DRN YYGG+S S+ L +L+ +F
Sbjct: 1 MDVEYDVIVLGTGLKECILSGLLSVDRLKVLHMDRNDYYGGDSTSLN-LNQLWKRFKGEG 59
Query: 295 -PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKVP 471
P G RD+NVD+IPKF+MANG LV++LIHTGVT+YL FK+++GSYV+ GKI KVP
Sbjct: 60 TPPAQIGASRDYNVDMIPKFMMANGTLVRVLIHTGVTKYLSFKAVDGSYVFNKGKIHKVP 119
Query: 472 VDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTANMQSLYDKFGLDRN 651
EAL S LMG+FEKRR F ++VQD++E D T K +D + + L K+GLD N
Sbjct: 120 STDMEALKSPLMGLFEKRRAGKFFLFVQDYKENDPSTHKGYDLNKMTTKELISKYGLDDN 179
Query: 652 TQDFTGHALALYLDDNYLQQPAIQTI 729
T DF GHA+AL+ +DNYL +PAI T+
Sbjct: 180 TIDFIGHAVALHKEDNYLTEPAIDTL 205
>01_01_1165 -
9267891-9268145,9268395-9268510,9268991-9269127,
9269645-9269808,9269892-9269972,9270783-9270962,
9271489-9271929,9273234-9273344,9274355-9274463,
9274618-9274643,9274823-9274903,9275013-9275211,
9275374-9275449,9275553-9275769,9276117-9276155,
9276684-9276783,9276962-9277084,9277171-9277895
Length = 1059
Score = 55.2 bits (127), Expect = 6e-08
Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 32/183 (17%)
Frame = +1
Query: 103 YTIIMDEAYXVIVLGTGLKXCILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKF 282
Y I ++ V++ GTGL +L+ + +GK VLH+D N +YG +S+ PL L +
Sbjct: 16 YPTIDPTSFDVVLCGTGLPESVLAAACAAAGKTVLHVDPNPFYGSLFSSL-PLPSLPSFL 74
Query: 283 N-------APAPD------------------ETYGR----GRDWNVDLI-PKFLMANGLL 372
+ AP+P ET G R + DL+ P+ L
Sbjct: 75 SPSPSDDPAPSPSPSSAAAVDLRRRSPYSEVETSGAVPEPSRRFTADLVGPRLLYCADEA 134
Query: 373 VKLLIHTGVTRYLEFKSIE-GSYVYKGGKISKVPVDQKEALASD-LMGMFEKRRFRNFLI 546
V LL+ +G + ++EFKS+E G+ +Y G + VP D ++A+ D + + EK F
Sbjct: 135 VDLLLRSGGSHHVEFKSVEGGTLLYWDGDLYPVP-DSRQAIFKDTTLQLREKNLLFRFFK 193
Query: 547 YVQ 555
VQ
Sbjct: 194 LVQ 196
>12_02_1229 +
27197464-27197481,27200438-27201583,27201935-27202201,
27202849-27202882,27202997-27203100,27203174-27203308,
27203367-27203511,27203864-27203880
Length = 621
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = +1
Query: 115 MDEAYXVIVLGTGLKXCILSGMLSVSGKKVL 207
MDE Y VIVLGTGL CILSG+LSV G K +
Sbjct: 449 MDEEYDVIVLGTGLMECILSGLLSVDGLKFI 479
>01_05_0559 +
23281408-23282457,23282580-23282942,23283938-23283991,
23284088-23284156
Length = 511
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1
Query: 133 VIVLGTGLKXCILSGMLSVSGKKVLHIDRNKYYG---GESASITPLEEL 270
+I++ TGLK CI + ++G VL + N G GE A + +E+L
Sbjct: 266 IILMNTGLKSCIPPELGMLTGLAVLDVSHNSLMGAIPGELARLENIEQL 314
>02_01_0206 +
1388149-1388330,1388527-1388629,1388896-1388964,
1389684-1389803,1390352-1390482,1390840-1390881,
1390961-1391138,1391241-1391319,1391441-1391610,
1392503-1392629,1392731-1392846,1392926-1393033,
1393118-1393180,1393283-1393456,1393814-1393978
Length = 608
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = +1
Query: 358 ANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKVPVDQKEALASDLMGMFEKRRFRN 537
A + KLL+ R +++ +V +GG+ S++PVD ++ S++ + RF+
Sbjct: 378 AKDFVKKLLVKNPRARLTAAQALSHPWVREGGEASEIPVD--ISVLSNMRQFVKYSRFKQ 435
Query: 538 FLI--YVQDFQEEDAKTWKD-FD 597
F + +EE+ KD FD
Sbjct: 436 FALRALASTLKEEELADLKDQFD 458
>08_02_0456 -
17362080-17364156,17364853-17364942,17372615-17373318,
17373421-17373451,17374366-17374448,17374517-17374640,
17376427-17376560
Length = 1080
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +1
Query: 343 PKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKVPVD-QKEALASDLMGMFE 519
P+++ G + +H + ++ KSIE ++V G I VP+D QK+ L+ E
Sbjct: 597 PRYIGKFGEVKSCRVHDTILDFIRSKSIEENFVTLLG-IPNVPIDRQKKVRRLSLLVNTE 655
Query: 520 K---RRFRNFLIYVQDFQEEDAKTWKD 591
+ N + YV D +E+D+ +D
Sbjct: 656 EYYSSLEENNIKYVLDKKEDDSNEQED 682
>11_01_0151 -
1263237-1263406,1267405-1267646,1267681-1267781,
1268010-1268780
Length = 427
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/66 (22%), Positives = 35/66 (53%)
Frame = +1
Query: 394 GVTRYLEFKSIEGSYVYKGGKISKVPVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEED 573
G+ LE ++ +++ G + + + + +A D + K+R RN L+YV+D +
Sbjct: 53 GIEHGLEL--VKQRIIWRVGNGDNIKIWRHKWVAHDDRLITLKKRVRNRLMYVKDLMDAG 110
Query: 574 AKTWKD 591
+++W +
Sbjct: 111 SRSWNE 116
>08_01_1077 -
11027732-11027839,11028346-11028477,11029722-11029802,
11029911-11030063,11030167-11030281,11030282-11030927,
11031409-11031613,11031696-11031758
Length = 500
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +1
Query: 574 AKTWKDFDPSTANMQSLYDKFGLDR-NTQDFTGHAL 678
+K WK+ S + DKFG+DR +F H L
Sbjct: 137 SKRWKELSASAPCLDICVDKFGMDRVRFSEFVAHLL 172
>02_04_0468 - 23172561-23174201
Length = 546
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 466 VPVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKD 591
VPVD KEALA D++ R R +IY D +W D
Sbjct: 380 VPVDFKEALADDVLPDGTPVRARQRVIYYTYAIGRDPASWGD 421
>01_06_0404 +
29098141-29098214,29098459-29098673,29099491-29099596,
29099686-29100235,29100332-29100429,29100519-29100764,
29100867-29100981,29101092-29101305,29101402-29101991
Length = 735
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -3
Query: 477 IDRYFGDFSTFVNITSFDGLKLQVPGDARVNKQFD*QSISHQKLRNQVNVPVSTSTVCF 301
+DR F + TF +TS +K Q ++ + Q ++ + K N NVP ST+CF
Sbjct: 295 MDRDFPAYVTFGGVTSSMTIKGQSLSNSTL-PQGQRYAMINAKNANAANVPSENSTLCF 352
>07_03_0288 +
16285485-16285721,16285811-16286184,16286499-16286892,
16286917-16287806,16291189-16291446,16291518-16291628,
16291697-16291775,16291880-16291972,16292095-16292280
Length = 873
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 427 EGSYVYKGGKISKVPVDQKEALASDLMGMFEKRRFRNFLIY 549
EG V+K K+ +V V K + G F R R+ LIY
Sbjct: 217 EGDVVFKDQKLKEVAVKMKNIVMQQQAGTFVPDRDRDELIY 257
>03_06_0165 - 32108697-32109788
Length = 363
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +1
Query: 202 VLHIDRNKYYGGESASITPLEELFAKFNAPAPDETYGRGRDWNVDLIPKFLMANGLLVKL 381
++ ID + E + P+EE + P P + + R++ V L P+F++ + K+
Sbjct: 158 IMDIDPTYWCSSEVLAYDPVEECWCW--GPLPQPPFFQDREYKVPLKPRFMVVDS--TKI 213
Query: 382 LIHTGVTRY 408
+ T Y
Sbjct: 214 CVSTTTATY 222
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,218,088
Number of Sequences: 37544
Number of extensions: 470618
Number of successful extensions: 1210
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1206
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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