Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_M05
(478 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 29 0.034
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 1.7
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 1.7
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 6.8
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 6.8
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 21 6.8
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 21 9.0
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 21 9.0
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.0
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 21 9.0
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 21 9.0
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 21 9.0
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 28.7 bits (61), Expect = 0.034
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 473 ICXSHITCRRHKNNYFLAGFLVAFLVRTF 387
IC S I R H Y + GFL+A +V+ F
Sbjct: 144 ICTSGIVGRTHTVGYIIIGFLLAGIVQPF 172
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 1.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 119 SNTRSQPLLVL*GKRGQMLNSM 184
+ T S+P+LVL G R ++L S+
Sbjct: 273 AQTGSEPMLVLSGPRTRLLGSV 294
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 1.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 119 SNTRSQPLLVL*GKRGQMLNSM 184
+ T S+P+LVL G R ++L S+
Sbjct: 273 AQTGSEPMLVLSGPRTRLLGSV 294
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic
acetylcholine receptor alpha1subunit protein.
Length = 601
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -3
Query: 83 ICCLGTPLPGPSTSARVWSITXTTLTN 3
I CL P PG S ++ + L+N
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSN 31
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.0 bits (42), Expect = 6.8
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = -3
Query: 371 GIFFLPKVPARAAFTFKLLNTAVLARFLLTRAAVNLNLS*SVICARFSLFANF 213
GI L K P+R++ L ++L +V++ + RFS F F
Sbjct: 543 GITILEKKPSRSSTLVSFLQPFSNTLWILVMVSVHVVALVLYLLDRFSPFGRF 595
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 21.0 bits (42), Expect = 6.8
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 87 LKPTPSHKIPPQI 125
+K P HK+PP I
Sbjct: 62 VKYLPGHKLPPNI 74
Score = 21.0 bits (42), Expect = 6.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 158 KRGQMLNSMKNGQKVNGP 211
K ++ M NGQK+ GP
Sbjct: 284 KISELEKEMLNGQKLQGP 301
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 20.6 bits (41), Expect = 9.0
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +2
Query: 410 PKNQLRSNCFCVCDRLC 460
P N++ S C C R C
Sbjct: 38 PSNEIFSRCDGRCQRFC 54
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 20.6 bits (41), Expect = 9.0
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +2
Query: 410 PKNQLRSNCFCVCDRLC 460
P N++ S C C R C
Sbjct: 38 PSNEIFSRCDGRCQRFC 54
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 20.6 bits (41), Expect = 9.0
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 244 MTDYDRFKLTAARVKRNRARTA 309
+T++ RF+ AA + R RTA
Sbjct: 1137 LTEWSRFEFRAALHEALRGRTA 1158
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 20.6 bits (41), Expect = 9.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 342 CWYLRQEKYP*SGCEKSAHQEGDQKT 419
C Y R +K G ++ A QE Q+T
Sbjct: 162 CQYCRYQKCLAMGMKREAVQEERQRT 187
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 20.6 bits (41), Expect = 9.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 342 CWYLRQEKYP*SGCEKSAHQEGDQKT 419
C Y R +K G ++ A QE Q+T
Sbjct: 162 CQYCRYQKCLAMGMKREAVQEERQRT 187
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 20.6 bits (41), Expect = 9.0
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -2
Query: 420 WFFGRLLGAHFFRSRFRDIFLAEGTSTRSLHL 325
WF R A FFR + A GT++ + L
Sbjct: 336 WFLTRQNPAAFFRGMMQAWMTALGTASSAATL 367
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,875
Number of Sequences: 438
Number of extensions: 2749
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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