Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_M04
         (538 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   5.2  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.1  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.1  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   9.1  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   9.1  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 297 QHHTVVSQRGLQSVTY 250
           QHH +V   G   VTY
Sbjct: 187 QHHKIVLDMGKNCVTY 202


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 330 CLILLSLLVES 298
           CL+LL+LLV S
Sbjct: 9   CLVLLALLVSS 19


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 197 AS*SNCYPSSSQHINSYNCLH 135
           AS S+C  S++  + S NCL+
Sbjct: 234 ASRSSCLGSNTSSMLSLNCLN 254


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 330 CLILLSLLVES 298
           CL+LL+LLV S
Sbjct: 9   CLVLLALLVSS 19


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 197 AS*SNCYPSSSQHINSYNCLH 135
           AS S+C  S++  + S NCL+
Sbjct: 23  ASRSSCLGSNTSSMLSLNCLN 43


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 197 AS*SNCYPSSSQHINSYNCLH 135
           AS S+C  S++  + S NCL+
Sbjct: 23  ASRSSCLGSNTSSMLSLNCLN 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,561
Number of Sequences: 336
Number of extensions: 1875
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)