Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_M04
         (538 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80836-12|AAB37889.1|  187|Caenorhabditis elegans Dj-1 (mammalia...   113   6e-26
AF016418-9|AAK18904.1|  186|Caenorhabditis elegans Hypothetical ...    85   4e-17
AJ271466-1|CAB69047.1|  341|Caenorhabditis elegans fructose-1,6-...    29   1.6  
AC006670-1|AAF39910.1|  341|Caenorhabditis elegans Fructose-1,6-...    29   1.6  
AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation transp...    29   2.8  
AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation transp...    29   2.8  
AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical...    29   2.8  
AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical...    29   2.8  
Z92826-1|CAB07320.1|  263|Caenorhabditis elegans Hypothetical pr...    28   3.7  

>U80836-12|AAB37889.1|  187|Caenorhabditis elegans Dj-1 (mammalian
           transcriptionalregulator) related protein 1.1 protein.
          Length = 187

 Score =  113 bits (273), Expect = 6e-26
 Identities = 66/147 (44%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
 Frame = +3

Query: 96  KSALVILA-QGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 272
           KSAL+ILA +GAEEME +IT D+L RG + V  AGL+G+ PV C+R   +VPD  L +  
Sbjct: 4   KSALIILAAEGAEEMEVIITGDVLARGEIRVVYAGLDGAEPVKCARGAHIVPDVKLED-- 61

Query: 273 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 452
            E +++D VILPGG  GS++L++S  V  +LK   ++G               HGV +  
Sbjct: 62  VETEKFDIVILPGGQPGSNTLAESLLVRDVLKSQVESGGLIGAICAAPIALLSHGV-KAE 120

Query: 453 RVTSYPSTRDKLSAGDYTYVEGERVVV 533
            VTS+PS ++KL  G Y Y E +RVVV
Sbjct: 121 LVTSHPSVKEKLEKGGYKYSE-DRVVV 146


>AF016418-9|AAK18904.1|  186|Caenorhabditis elegans Hypothetical
           protein C49G7.11 protein.
          Length = 186

 Score = 84.6 bits (200), Expect = 4e-17
 Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 1/148 (0%)
 Frame = +3

Query: 96  KSALVILA-QGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQVTLVPDKSLTEAL 272
           KSAL++L  + AEE+E ++T D+L RGG+ V  AG   + PV C++   +VPD +L +  
Sbjct: 5   KSALILLPPEDAEEIEVIVTGDVLVRGGLQVLYAG-SSTEPVKCAKGARIVPDVALKD-- 61

Query: 273 AEKQQYDAVILPGGLEGSDSLSKSEKVGALLKDHEDNGKXXXXXXXXXXXXXXHGVARGR 452
            + + +D +I+PGG  G   L++   +G LLK    +G               HG+    
Sbjct: 62  VKNKTFDIIIIPGG-PGCSKLAECPVIGELLKTQVKSGGLIGAICAGPTVLLAHGIV-AE 119

Query: 453 RVTSYPSTRDKLSAGDYTYVEGERVVVD 536
           RVT + + +DK++ G Y Y++   V+ D
Sbjct: 120 RVTCHYTVKDKMTEGGYKYLDDNVVISD 147


>AJ271466-1|CAB69047.1|  341|Caenorhabditis elegans
           fructose-1,6-bisphosphatase protein.
          Length = 341

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +3

Query: 90  MSKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLC 224
           M KS+       +EE + +I V+  RRG   VT   L+GSS + C
Sbjct: 89  MLKSSYTTCLLVSEENDELIEVEEQRRGKYIVTFDPLDGSSNIDC 133


>AC006670-1|AAF39910.1|  341|Caenorhabditis elegans
           Fructose-1,6-biphosphatase protein1 protein.
          Length = 341

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +3

Query: 90  MSKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLC 224
           M KS+       +EE + +I V+  RRG   VT   L+GSS + C
Sbjct: 89  MLKSSYTTCLLVSEENDELIEVEEQRRGKYIVTFDPLDGSSNIDC 133


>AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation
            transporting ATPase protein.
          Length = 1121

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 21/83 (25%), Positives = 36/83 (43%)
 Frame = +3

Query: 57   LANYRAFKSRTMSKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQV 236
            L NY+      + K+  ++ A+   E +  I  ++ RRG       G    +PVL    V
Sbjct: 770  LKNYKKSDWNLLLKNHNIVFARTNTEQKLEIVQEVQRRGETVAVTGGGVDDTPVLAHANV 829

Query: 237  TLVPDKSLTEALAEKQQYDAVIL 305
             +   +S ++    KQ  D V+L
Sbjct: 830  GIAMGQSGSD--IAKQTADIVLL 850


>AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation
            transporting ATPase protein.
          Length = 1045

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 21/83 (25%), Positives = 36/83 (43%)
 Frame = +3

Query: 57   LANYRAFKSRTMSKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQV 236
            L NY+      + K+  ++ A+   E +  I  ++ RRG       G    +PVL    V
Sbjct: 770  LKNYKKSDWNLLLKNHNIVFARTNTEQKLEIVQEVQRRGETVAVTGGGVDDTPVLAHANV 829

Query: 237  TLVPDKSLTEALAEKQQYDAVIL 305
             +   +S ++    KQ  D V+L
Sbjct: 830  GIAMGQSGSD--IAKQTADIVLL 850


>AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical
            protein Y105E8A.12b protein.
          Length = 1045

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 21/83 (25%), Positives = 36/83 (43%)
 Frame = +3

Query: 57   LANYRAFKSRTMSKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQV 236
            L NY+      + K+  ++ A+   E +  I  ++ RRG       G    +PVL    V
Sbjct: 770  LKNYKKSDWNLLLKNHNIVFARTNTEQKLEIVQEVQRRGETVAVTGGGVDDTPVLAHANV 829

Query: 237  TLVPDKSLTEALAEKQQYDAVIL 305
             +   +S ++    KQ  D V+L
Sbjct: 830  GIAMGQSGSD--IAKQTADIVLL 850


>AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical
            protein Y105E8A.12a protein.
          Length = 1121

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 21/83 (25%), Positives = 36/83 (43%)
 Frame = +3

Query: 57   LANYRAFKSRTMSKSALVILAQGAEEMETVITVDMLRRGGVTVTLAGLEGSSPVLCSRQV 236
            L NY+      + K+  ++ A+   E +  I  ++ RRG       G    +PVL    V
Sbjct: 770  LKNYKKSDWNLLLKNHNIVFARTNTEQKLEIVQEVQRRGETVAVTGGGVDDTPVLAHANV 829

Query: 237  TLVPDKSLTEALAEKQQYDAVIL 305
             +   +S ++    KQ  D V+L
Sbjct: 830  GIAMGQSGSD--IAKQTADIVLL 850


>Z92826-1|CAB07320.1|  263|Caenorhabditis elegans Hypothetical
           protein C18D11.1 protein.
          Length = 263

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 471 WGMTSRAGPSPRRGLQTLW-EQHKWQQ*FSHY 379
           +G T    P P RG    + EQH+ QQ + HY
Sbjct: 224 YGETHAVAPPPHRGATDYYPEQHRPQQQYGHY 255


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,636,483
Number of Sequences: 27780
Number of extensions: 197523
Number of successful extensions: 547
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)