Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_L17
         (813 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.0  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   5.0  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    22   6.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.8  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 163  LTSCTLITHTIIMEDKASLKELDQWIQQLNE 255
            L  C L TH    ++KASL  +   ++ LN+
Sbjct: 1116 LFKCMLCTHQKAGDEKASLINIADSLEMLNK 1146


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 163  LTSCTLITHTIIMEDKASLKELDQWIQQLNE 255
            L  C L TH    ++KASL  +   ++ LN+
Sbjct: 1116 LFKCMLCTHQKAGDEKASLINIADSLEMLNK 1146


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 163  LTSCTLITHTIIMEDKASLKELDQWIQQLNE 255
            L  C L TH    ++KASL  +   ++ LN+
Sbjct: 1116 LFKCMLCTHQKAGDEKASLINIADSLEMLNK 1146


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 163  LTSCTLITHTIIMEDKASLKELDQWIQQLNE 255
            L  C L TH    ++KASL  +   ++ LN+
Sbjct: 1116 LFKCMLCTHQKAGDEKASLINIADSLEMLNK 1146


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 472 YSVETVTLLVALKVRYRERITILRGNHES 558
           YS E   + +  +  Y ERI+++ G HE+
Sbjct: 190 YSCEYNLVWIKEESIYEERISVVSGLHEA 218


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 631 HFTDLFDFLPLTALVXGQIFCLH 699
           + T +F FLP+ +   GQ  CL+
Sbjct: 20  NLTKIFGFLPVCSSQKGQKTCLN 42


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = +1

Query: 202 EDKASLKELDQWIQQLNECKQLTENQVKTLCDK 300
           ED+ ++K  +  ++++ +  +LTEN V  L +K
Sbjct: 20  EDQYTIKYDNVNLKEILQSDRLTENYVNCLLEK 52


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = +3

Query: 588 RRVPPEIRQRVRLEALHRSIRFPALDGA 671
           +R+P + R+R R+E ++ ++ +   D A
Sbjct: 233 KRIPHDYRKRFRMEKIYVALVWGVKDQA 260


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,718
Number of Sequences: 336
Number of extensions: 3348
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)