Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_L15
         (597 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.0  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   4.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.9  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -3

Query: 340 FAVILYR*FNICETEIFVRFLAHINIGHLQVTIFTLSFTNTPS 212
           F  + Y+  +I     + RFLA     H+   I  +SFT  PS
Sbjct: 496 FRFLFYKPEDIFRPNTYNRFLAATGGDHVISLIDEISFTFPPS 538


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -3

Query: 316 FNICETEIFVRFLAHINIGHLQVTIFTLSFTN 221
           +N+ E      +L  ++ G L+  IF  +FTN
Sbjct: 56  YNVSEISENFYYLPAMSTGPLKYAIFQKNFTN 87


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +2

Query: 137 SKLIFELCKACEL 175
           ++L+  LCK+C+L
Sbjct: 206 AELVMPLCKSCDL 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,944
Number of Sequences: 336
Number of extensions: 3191
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)