Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_L15
         (597 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061537-1|AAL29085.1|  127|Drosophila melanogaster LP01766p pro...    64   1e-10
AE013599-2917|AAF57541.2|  127|Drosophila melanogaster CG16926-P...    64   1e-10
BT022231-1|AAY54647.1|  133|Drosophila melanogaster IP12465p pro...    28   8.4  
AY061379-1|AAL28927.1| 1180|Drosophila melanogaster LD30316p pro...    28   8.4  
AE014298-1715|AAF48115.2| 1180|Drosophila melanogaster CG1559-PA...    28   8.4  

>AY061537-1|AAL29085.1|  127|Drosophila melanogaster LP01766p
           protein.
          Length = 127

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 38/77 (49%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
 Frame = +2

Query: 179 KMSCIPPSAFTAGRIRE--TQRENRDLKMPNVNMGK-KPDKYFSFTNVEL-PVKYNSKFM 346
           KM+ IP  AF A +IRE   +RE    ++ +    K   D   + T  E  P KYN K M
Sbjct: 44  KMAAIPQGAFAACKIREQFNERELIIARLRSAAADKGSVDNGNALTQREYSPNKYNDKLM 103

Query: 347 NSIWGKYNRYSPHNVKK 397
           NSIWG YNRYSPHNVKK
Sbjct: 104 NSIWGLYNRYSPHNVKK 120


>AE013599-2917|AAF57541.2|  127|Drosophila melanogaster CG16926-PA
           protein.
          Length = 127

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 38/77 (49%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
 Frame = +2

Query: 179 KMSCIPPSAFTAGRIRE--TQRENRDLKMPNVNMGK-KPDKYFSFTNVEL-PVKYNSKFM 346
           KM+ IP  AF A +IRE   +RE    ++ +    K   D   + T  E  P KYN K M
Sbjct: 44  KMAAIPQGAFAACKIREQFNERELIIARLRSAAADKGSVDNGNALTQREYSPNKYNDKLM 103

Query: 347 NSIWGKYNRYSPHNVKK 397
           NSIWG YNRYSPHNVKK
Sbjct: 104 NSIWGLYNRYSPHNVKK 120


>BT022231-1|AAY54647.1|  133|Drosophila melanogaster IP12465p
           protein.
          Length = 133

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 128 VTLSKLIFELCKACELKKMSCIPPSAFTAGRIRETQ 235
           +T S+       +CELKK   +P +  T G + ETQ
Sbjct: 81  LTSSRSYCNFRNSCELKKSCSLPQADITKGSLTETQ 116


>AY061379-1|AAL28927.1| 1180|Drosophila melanogaster LD30316p
           protein.
          Length = 1180

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
 Frame = +2

Query: 236 RENRDLKMPNVNMGKKPDKYFSF--TNVELPVKYNSKFMNSIWGK-YNRYSP-HNVKKVN 403
           +EN +++  +V + KK   YF+   T+ ++ + +  +      G+ YN +S   +V KV 
Sbjct: 303 QENIEVRW-DVGLNKKTIAYFTLAKTDSDMKLMHGDELRLHYVGELYNPWSEIGHVIKVP 361

Query: 404 DAFVSSGDFQQLPVNSSKNEPMITLPSPKLDNVWAAINVSQSH*QFCFFFLN 559
           D F   GD   L + SS N P+    +  +D +W   +  +     C F ++
Sbjct: 362 DNF---GDDVGLELKSSTNAPVKCTSNFTVDFIWKCTSFDRMTRALCKFAID 410


>AE014298-1715|AAF48115.2| 1180|Drosophila melanogaster CG1559-PA
           protein.
          Length = 1180

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
 Frame = +2

Query: 236 RENRDLKMPNVNMGKKPDKYFSF--TNVELPVKYNSKFMNSIWGK-YNRYSP-HNVKKVN 403
           +EN +++  +V + KK   YF+   T+ ++ + +  +      G+ YN +S   +V KV 
Sbjct: 303 QENIEVRW-DVGLNKKTIAYFTLAKTDSDMKLMHGDELRLHYVGELYNPWSEIGHVIKVP 361

Query: 404 DAFVSSGDFQQLPVNSSKNEPMITLPSPKLDNVWAAINVSQSH*QFCFFFLN 559
           D F   GD   L + SS N P+    +  +D +W   +  +     C F ++
Sbjct: 362 DNF---GDDVGLELKSSTNAPVKCTSNFTVDFIWKCTSFDRMTRALCKFAID 410


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,508,930
Number of Sequences: 53049
Number of extensions: 554013
Number of successful extensions: 1182
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1182
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)