Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_L14
         (779 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70782-10|CAN86639.1|  456|Caenorhabditis elegans Hypothetical p...    30   1.6  
Z70782-9|CAA94840.1|  453|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AF025452-2|AAB70943.1|  585|Caenorhabditis elegans Hypothetical ...    29   3.7  
Z81044-4|CAD42644.1|   96|Caenorhabditis elegans Hypothetical pr...    28   8.6  

>Z70782-10|CAN86639.1|  456|Caenorhabditis elegans Hypothetical
           protein R04B5.4b protein.
          Length = 456

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
 Frame = +2

Query: 98  DEQTEINARQERLVTNQVASAIENIRKQIREAGFDPLDVDRREIVIPPEEDFHALAAFAE 277
           DE  E+  R +  VT ++   + N++K       +PL      + I P     A+  F E
Sbjct: 377 DECNEVGRRVKHRVTREMTFYLRNVKKHE-----EPLYRMASVVSILPSLQ-RAVRRFQE 430

Query: 278 DIKSTGLSNIVIITNNF-SILSARLN 352
           DI+   + NI  +  NF +I++ + N
Sbjct: 431 DIEMANIFNIYALPENFVNIINGKFN 456


>Z70782-9|CAA94840.1|  453|Caenorhabditis elegans Hypothetical
           protein R04B5.4a protein.
          Length = 453

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
 Frame = +2

Query: 98  DEQTEINARQERLVTNQVASAIENIRKQIREAGFDPLDVDRREIVIPPEEDFHALAAFAE 277
           DE  E+  R +  VT ++   + N++K       +PL      + I P     A+  F E
Sbjct: 374 DECNEVGRRVKHRVTREMTFYLRNVKKHE-----EPLYRMASVVSILPSLQ-RAVRRFQE 427

Query: 278 DIKSTGLSNIVIITNNF-SILSARLN 352
           DI+   + NI  +  NF +I++ + N
Sbjct: 428 DIEMANIFNIYALPENFVNIINGKFN 453


>AF025452-2|AAB70943.1|  585|Caenorhabditis elegans Hypothetical
           protein B0454.6 protein.
          Length = 585

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 16/75 (21%), Positives = 36/75 (48%)
 Frame = +2

Query: 239 PEEDFHALAAFAEDIKSTGLSNIVIITNNFSILSARLNLVLSLPRVEASVGAARVELNVF 418
           P +  H  A FAE   + G + ++ I +  +++    NLV  +  +  +V A   +  +F
Sbjct: 293 PYDQVHTTAPFAEAFSARGCTTVMYIISIGALIGLTNNLVTGVFALPRAVYAMADDGLIF 352

Query: 419 DYEGYASASGRAAIN 463
            +  + ++S +  +N
Sbjct: 353 KWLAHVTSSTKVPLN 367


>Z81044-4|CAD42644.1|   96|Caenorhabditis elegans Hypothetical
           protein C30H6.10 protein.
          Length = 96

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 18/52 (34%), Positives = 31/52 (59%)
 Frame = +2

Query: 38  VMKIFVVLTAILACASTQTFDEQTEINARQERLVTNQVASAIENIRKQIREA 193
           V+ +   L +I+A AS   FDE+  +N R  R++ NQ+ S I+  R+ ++ A
Sbjct: 6   VVLLLFALCSIVA-ASPMWFDEEEPMNLRAFRVMPNQLDS-IDASRRLLKRA 55


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,707,485
Number of Sequences: 27780
Number of extensions: 315897
Number of successful extensions: 886
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)