Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_L09
         (657 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1824|AAF48212.1|  179|Drosophila melanogaster CG4647-PA...   134   1e-31
AY075476-1|AAL68288.1|  115|Drosophila melanogaster RE35556p pro...    84   1e-16

>AE014298-1824|AAF48212.1|  179|Drosophila melanogaster CG4647-PA
           protein.
          Length = 179

 Score =  134 bits (324), Expect = 1e-31
 Identities = 59/157 (37%), Positives = 100/157 (63%), Gaps = 1/157 (0%)
 Frame = +3

Query: 129 QLALSSKHYSSYGKSPFVRKIKEQYNYEIEKNPPEWEYVKRLLPFTTIPKIIPKDSYPSG 308
           Q+ +     SS+  S  V+++ +    E+  NPPEW +V+RLLP  T+P+ + K  YPSG
Sbjct: 23  QIHMQPALMSSFRSSREVQELDKYPEVEVVANPPEWRFVERLLPAKTVPQPVEKPKYPSG 82

Query: 309 WVPPKEEALNHPYFLSRTKNAELPIYLKITYRGMRKISIIRKIEGDIWLLNDEIKQYLKQ 488
           W P KE+     Y ++RTKN  +P+YL   +RG R+I+++R+++GDIW L  +++  ++Q
Sbjct: 83  WQPQKEDGSELGYHVARTKNHMVPVYLHTRFRGQRRITVVRRVQGDIWTLEKDLRAVVEQ 142

Query: 489 -KNKRYVETRVHEVARLIETKGDYVNDLREWALSKGF 596
            +N +   TR++E++  I   GD+V+ LR++   KGF
Sbjct: 143 SRNGKVCATRINELSGQIHFHGDHVDVLRDYLKEKGF 179


>AY075476-1|AAL68288.1|  115|Drosophila melanogaster RE35556p
           protein.
          Length = 115

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 37/93 (39%), Positives = 56/93 (60%)
 Frame = +3

Query: 129 QLALSSKHYSSYGKSPFVRKIKEQYNYEIEKNPPEWEYVKRLLPFTTIPKIIPKDSYPSG 308
           Q+ +     SS+  S  V+++ +    E+  NPPEW +V+RLLP  T+P+ + K  YPSG
Sbjct: 23  QIHMQPALMSSFRSSREVQELDKYPEVEVVANPPEWRFVERLLPAKTVPQPVEKPKYPSG 82

Query: 309 WVPPKEEALNHPYFLSRTKNAELPIYLKITYRG 407
           W P KE+     Y ++RTKN  +P+YL   +RG
Sbjct: 83  WQPQKEDGSELGYHVARTKNHMVPVYLHTRFRG 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,774,346
Number of Sequences: 53049
Number of extensions: 562151
Number of successful extensions: 1241
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1240
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)