Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_L07
(628 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce... 58 8e-10
SPAPYUG7.02c |sin1||stress activated MAP kinase interacting prot... 28 1.3
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 26 5.1
SPAC144.18 |||nucleotide sugar transporter |Schizosaccharomyces ... 26 5.1
SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 26 5.1
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 25 6.8
SPBC14C8.04 |||acetolactate synthase regulatory unit|Schizosacch... 25 6.8
SPBC2G2.13c |||deoxycytidylate deaminase |Schizosaccharomyces po... 25 6.8
SPCC4F11.03c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 25 9.0
>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 520
Score = 58.4 bits (135), Expect = 8e-10
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 22/158 (13%)
Frame = +3
Query: 216 YRGIRYAEPPVGKLRFQPPKLIRQ-YKERVDASKEGPACPLPV---------PPTYYVDE 365
+ GIRYA+PPVGKLR++ P + Y D ++ CP P P + DE
Sbjct: 21 FTGIRYAKPPVGKLRWRRPVTLEDGYDYSGDYNQFKTICPQPFYNNRKNQVRNPDFKYDE 80
Query: 366 DCLRINVYTPS-NNVSKPLPVIFYIHAG-------AFYSMTGRSDLAGPHYLLDRDLVLV 521
DCL +N++ P+ ++ PV+++IH G Y DL +LV
Sbjct: 81 DCLFLNIWVPAGEKPAEGWPVLYFIHGGWLQVGNPLHYRQCDPQDLQADG--SPAKFILV 138
Query: 522 TINYRLGSLGFISTGDSL----APGNNGLKDQVXALHW 623
+ +RL GF++ + L N G DQ L W
Sbjct: 139 SPGHRLNLFGFLAGKELLEEDPKSSNFGFWDQRLGLEW 176
>SPAPYUG7.02c |sin1||stress activated MAP kinase interacting protein
Sin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 27.9 bits (59), Expect = 1.3
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 219 RGIRYAEPPVGKLRFQPPKLIRQYKERVDASKEGPACPLPVPPTYYVDEDCLRINVYTPS 398
R + A+ P LR + ++KE ++S+ GP + + + + LR+N+Y PS
Sbjct: 246 RSVSNAKAPTSALR-----ALLEHKE--NSSQNGPLAENFATFSGHAESNALRLNIYFPS 298
Query: 399 N-NVSKPL 419
+ + SKPL
Sbjct: 299 SESPSKPL 306
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 25.8 bits (54), Expect = 5.1
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +3
Query: 249 GKLRFQPPKLIRQYKERVDASKEGPACPLPVPPTYYVDEDCLRINVYTPSNNVSKPLP 422
GK R +L+ +Y +K A P PVP + +V P NN+S P P
Sbjct: 496 GKPRTSVNRLVDRYNHTSSLNKVA-AAPAPVPKPVNLK------SVENPQNNISAPTP 546
>SPAC144.18 |||nucleotide sugar transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 345
Score = 25.8 bits (54), Expect = 5.1
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 399 NNVSKP--LPVIFYIHAGAFYSMTGRSDLAGPHYLLDRDLVLVTINYRLGSLGFI 557
N +SK LPV+ Y A ++T + L+ P Y ++ L+ V + ++G +
Sbjct: 7 NRISKSPILPVVSYCMASILMTLTNKYVLSSPGYNMNFLLLTVQSTVCVAAIGIL 61
>SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 578
Score = 25.8 bits (54), Expect = 5.1
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 423 VIFYIHAGAFYSMTGRSD 476
VIFY+H GA Y T R++
Sbjct: 140 VIFYVHGGAHYLSTVRTN 157
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -3
Query: 515 HQISVQQVVRPGQVAPARHGVERSGVNVKYHRERLRDIVTRS 390
H +S +Q+ P V + + +G+N HRE +++V +S
Sbjct: 2115 HLVSPEQLALPDDV---KDDIRANGLNFIEHRELTKEVVAQS 2153
>SPBC14C8.04 |||acetolactate synthase regulatory
unit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 289
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 321 PACPLPVPPTYYVDEDCLRINVYTPSNNVSKPLPVIF 431
P C + PP V E I + TP N V +P +F
Sbjct: 37 PRCRIIEPPRATVPEAVSNIIMSTPFNRVQRPKRHVF 73
>SPBC2G2.13c |||deoxycytidylate deaminase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 348
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 410 EASPCDILHSRRSVLLHDGQERPGRASLL 496
E C LH+ + LL G+ER G ++L
Sbjct: 264 ELDTCLCLHAEENALLEAGRERVGNNAIL 292
>SPCC4F11.03c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 335
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 250 GNYDSSPQN*FGNTKNALTR 309
GN +SPQ+ FG + +AL+R
Sbjct: 231 GNSSTSPQDNFGTSNSALSR 250
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,738,547
Number of Sequences: 5004
Number of extensions: 58709
Number of successful extensions: 157
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 277683324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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