Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_L06
         (472 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL034488-10|CAA22454.1|   84|Caenorhabditis elegans Hypothetical...   116   1e-26
AF036687-1|AAM75374.1|  173|Caenorhabditis elegans Hypothetical ...    27   6.8  

>AL034488-10|CAA22454.1|   84|Caenorhabditis elegans Hypothetical
           protein Y54G11A.11 protein.
          Length = 84

 Score =  116 bits (278), Expect = 1e-26
 Identities = 49/67 (73%), Positives = 52/67 (77%)
 Frame = +2

Query: 182 ATEALDQQFNCPFCNHEKSCEVKMDRARNTARIQCRVCLEDFQTTTNVLSEPIDVYNDWV 361
           A   LD QFNCPFCNHE+ CEVKMDR +N   I CRVC EDFQT  N LSEPIDVY+DWV
Sbjct: 16  AVMPLDTQFNCPFCNHERVCEVKMDREKNVGYISCRVCSEDFQTNINYLSEPIDVYSDWV 75

Query: 362 DACESAN 382
           DACE AN
Sbjct: 76  DACEQAN 82


>AF036687-1|AAM75374.1|  173|Caenorhabditis elegans Hypothetical
           protein C08G9.1 protein.
          Length = 173

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = +2

Query: 215 PFCNHEKSCEVKMDRARNTARIQCRVCLEDFQTTTNVLSEPIDVYNDWVDACE 373
           PF N   +C+ + D  +   R     C EDF  T   L   IDV  D  D+ +
Sbjct: 71  PFLNAHVNCDERQDNWQEVCR-----CSEDFCNTFAFLRSSIDVRPDPKDSVQ 118


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,251,461
Number of Sequences: 27780
Number of extensions: 149190
Number of successful extensions: 406
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 406
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)