Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_L05
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    26   1.2  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   1.6  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    24   3.7  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   6.4  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +2

Query: 440  TRTSDRN*ENGDLRPELPSQRPQRQIRQAHTKEGF-QIRKQIRQAPEEGRR 589
            T+T  +  E    RP +PS  P+   R+A+ +    ++R++ RQ  ++ RR
Sbjct: 1060 TQTVRQREEQCGERPSMPSSSPRTSERRANIRARMARLRQRHRQHQQDERR 1110


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +2

Query: 122 EEGQTGRNRPEAR*GAQAHG-GGLQSQKGEEGF 217
           E GQ G   P  +  A   G  GL+ QKGE GF
Sbjct: 496 EPGQPGYGIPGQKGNAGMAGFPGLKGQKGERGF 528


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
 Frame = +2

Query: 449 SDRN*ENG-DLRPELPSQRPQRQ----IRQAHTKEGFQIRKQIRQAPE 577
           S R+ ++G   RP+  + RP RQ    +     K  +Q+ KQIR+APE
Sbjct: 224 SSRDQQHGAQHRPQ--TTRPNRQDIIEVTSFTGKMWYQVYKQIREAPE 269


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +2

Query: 491 PSQRPQRQIRQAHTKEGFQIRKQIRQAPEEGRRIQ 595
           P Q+ QRQ +Q H +   Q ++Q +Q  ++ ++ Q
Sbjct: 217 PQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQ 251


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,459
Number of Sequences: 2352
Number of extensions: 7944
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)