Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_L04
(790 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0496 - 29795490-29796638,29796811-29796870,29798168-297983... 35 0.085
11_01_0515 + 4003167-4003229,4003318-4003738,4004224-4004367,400... 32 0.60
07_03_0318 - 16721615-16722154 31 1.0
04_03_0904 + 20717005-20718087 31 1.0
07_01_0862 - 7172083-7172931 31 1.4
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 31 1.4
08_02_0043 - 11550185-11550418,11551525-11551568,11552134-115521... 30 1.8
06_01_0835 - 6315762-6316844 30 1.8
10_06_0136 - 11114409-11114576,11114656-11114784,11114873-111150... 30 2.4
03_06_0265 + 32744609-32745073 29 3.2
09_03_0051 + 11902322-11903125 29 4.2
04_04_0799 + 28143878-28145042,28145127-28145290,28146008-281460... 29 4.2
11_04_0474 + 18162538-18163731,18163800-18163855,18163951-181640... 29 5.6
05_07_0173 + 28140484-28140869,28141079-28141481,28141719-281417... 29 5.6
04_04_0699 - 27345243-27346199 29 5.6
04_04_0318 + 24347364-24348826,24348920-24349048,24349158-243492... 29 5.6
01_06_1179 - 35161229-35162368 29 5.6
11_06_0611 + 25461469-25461655,25461670-25462238 28 7.4
07_03_1689 + 28710936-28711129,28711283-28711341,28711858-287118... 28 7.4
01_06_0088 + 26305326-26306372 28 7.4
12_02_1279 + 27510605-27513301 28 9.7
10_08_0106 + 14842748-14843085,14843122-14843250,14844145-148442... 28 9.7
07_01_0442 - 3348638-3349126,3349978-3350322 28 9.7
04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,871... 28 9.7
>01_06_0496 -
29795490-29796638,29796811-29796870,29798168-29798371,
29798739-29798984,29799375-29799464
Length = 582
Score = 34.7 bits (76), Expect = 0.085
Identities = 22/79 (27%), Positives = 36/79 (45%)
Frame = +3
Query: 531 KSNYSGKKRANTPAVAGEDTPAPAPKPSRGRFNRPSSRAVEPEAEXQNESVQPXRSNRFS 710
+S++S K ++ P ++TP P KPS + + + + +S P N F+
Sbjct: 496 RSSFSTK--SDYPENGAQNTPVPRRKPSYMAATESAKAKLRGQNSPRLDSDSPADMNGFT 553
Query: 711 RRGNY*KCYNSLTTPISPH 767
RR + NS P SPH
Sbjct: 554 RRQSLPSSTNSKLNPHSPH 572
>11_01_0515 +
4003167-4003229,4003318-4003738,4004224-4004367,
4004474-4004556,4004661-4004775,4005309-4005400,
4005558-4005612,4005689-4005834,4005888-4006001,
4006149-4006342,4006985-4007112,4008526-4008583,
4009800-4009876,4010214-4010263,4010336-4010515,
4010633-4010731,4010816-4011133,4011221-4011281,
4011693-4012781,4012951-4013005,4013133-4013291,
4013923-4014442
Length = 1406
Score = 31.9 bits (69), Expect = 0.60
Identities = 19/44 (43%), Positives = 22/44 (50%)
Frame = +3
Query: 558 ANTPAVAGEDTPAPAPKPSRGRFNRPSSRAVEPEAEXQNESVQP 689
A P V G PA AP P G + RPS RA E + +E V P
Sbjct: 101 ARGPPVPGSP-PAAAPVPPSGGWGRPSDRAGEGCSRRADEDVVP 143
>07_03_0318 - 16721615-16722154
Length = 179
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = -1
Query: 664 SASGSTALDDGLLNLPLEGFGAGAGVSSPATAGVLARFLPL*FDLAASPPASEGAADSVT 485
+A G+T++ GL G A AG +PA AG + PL A PA+ G A +
Sbjct: 81 AAPGATSVTTGLHEYHAPGMVATAG--APAPAGTADKVAPLGTPAPAVSPAAAGTAGTAA 138
Query: 484 VEPRDLASAACA 449
+AA A
Sbjct: 139 SAVATAGTAAAA 150
>04_03_0904 + 20717005-20718087
Length = 360
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/66 (30%), Positives = 24/66 (36%)
Frame = +1
Query: 562 THQPLPAKILLPPHRNLPEEDSTDHHQEPWNLKPXNRTSPFNXHDPTGSPDEETIKNAIT 741
T P P K P + P+E HH EP KP P P +P T
Sbjct: 32 TPTPTPVKPAPKPEKP-PKEHKPPHHHEPKPEKPPKEHKPPAYTPPKPTPTPPTYTPTPK 90
Query: 742 L*PPPF 759
PPP+
Sbjct: 91 PTPPPY 96
>07_01_0862 - 7172083-7172931
Length = 282
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/67 (34%), Positives = 30/67 (44%)
Frame = +1
Query: 559 PTHQPLPAKILLPPHRNLPEEDSTDHHQEPWNLKPXNRTSPFNXHDPTGSPDEETIKNAI 738
P +PLP PP LPE+++T P L P + P PT + EE I+
Sbjct: 178 PKKKPLPPPSP-PPQPPLPEKENTP--LPPLLLPPKKK--PLPPPSPTAAAKEEPIELEH 232
Query: 739 TL*PPPF 759
PPPF
Sbjct: 233 AAPPPPF 239
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +1
Query: 559 PTHQPLPAKILLPPHRNLPEEDSTDHHQEPWNLKPXNR--TSPFNXHDPTGSPDE 717
PT P PP + ST HH +P +L P SP H P SP +
Sbjct: 163 PTKAPAAISPATPPQLSPANAHSTHHHAKPPSLPPAEPPVPSPSPEHPPRHSPSK 217
>08_02_0043 -
11550185-11550418,11551525-11551568,11552134-11552185,
11552911-11553111,11553462-11553539,11553887-11554155,
11554241-11554300,11554433-11554547,11554651-11554710,
11554824-11555002,11555250-11555319,11555838-11555987,
11556108-11556287,11556366-11556449
Length = 591
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = -1
Query: 670 CXSASGSTALDDGLLNLPLEGFGAGAGVSSPATAGVLARFLPL*FDLAASPPASEGAADS 491
C S + A+ D LLN + A A A AGV+ L +SP +++ A D+
Sbjct: 35 CSDGSAAAAVSD-LLNAAADAADAEADAEDEAAAGVVEEMLREVHAFLSSPSSNQLAIDA 93
Query: 490 VTVE 479
+++E
Sbjct: 94 LSLE 97
>06_01_0835 - 6315762-6316844
Length = 360
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = -1
Query: 640 DDGLLNLPLEGFGAGAGVSSPATAGVLARFLPL*FDLAASPPASEGAADSVTVEP 476
D LN P G GA ++ P A + A+ + LAA+PPAS A + P
Sbjct: 232 DAARLNFPTLRRG-GAHLAGPLHASIDAKLTAICHSLAAAPPASSKKAAAAAAHP 285
>10_06_0136 -
11114409-11114576,11114656-11114784,11114873-11115016,
11115130-11115299,11116441-11116528,11116590-11116652,
11116678-11116799,11118506-11118671
Length = 349
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 577 PAKILLPPHRNLPEEDSTDHHQEPWNLKPXNRTSPFNXHDPTGS 708
P K+ PP LP S HH+ P + R +P + H TG+
Sbjct: 15 PCKLAPPPPPPLPVSPSPRHHRRPHSTATACRAAP-DLHSSTGA 57
>03_06_0265 + 32744609-32745073
Length = 154
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -1
Query: 610 GFGAGAGVSSPATAGVLARFLPL*FDLAASPPASEGAADSV 488
G G G G +SP AG A D+AASP +S +V
Sbjct: 7 GGGGGGGEASPPHAGSAAAMAGAGRDIAASPTSSRSVTQTV 47
>09_03_0051 + 11902322-11903125
Length = 267
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 558 ANTPAVAGEDTPAPAPKPSRGRFNRPSSRAVEPEAEXQNES 680
A PA + TP P P+PS + P ++ E E E + ++
Sbjct: 101 AAPPAASEPQTPTPPPRPSVAAPDTPPAQRPETEEEEEEDA 141
>04_04_0799 +
28143878-28145042,28145127-28145290,28146008-28146070,
28146268-28146491,28146850-28147555
Length = 773
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 534 IWQRRHQHRKEPRILLLLNREIWLQQL 454
+W++++Q E RIL + RE W++ L
Sbjct: 670 LWEQQNQEEGEERILAIRERERWMKML 696
>11_04_0474 + 18162538-18163731,18163800-18163855,18163951-18164011,
18164107-18165495,18166024-18166635,18166706-18166852,
18166941-18167209,18167322-18167412,18167500-18167757,
18168376-18168450,18168937-18168945
Length = 1386
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +1
Query: 439 RKSGHKLLKPNLAVQQ*QNPRLLPMLVATLPNRITVVRNVPTHQPLPAKILLPPHRNLPE 618
+ S LL + +Q Q L + V + +T+ N ++ L A L+PPH N +
Sbjct: 950 QSSKDHLLNQDQKAEQLQAIALPSLPVTSSARPVTMNANPVSNSQLAATALMPPHGNTKQ 1009
Query: 619 EDSTDHHQEP 648
S+ + +P
Sbjct: 1010 TSSSVNKADP 1019
>05_07_0173 + 28140484-28140869,28141079-28141481,28141719-28141781,
28142350-28142535,28144695-28145076,28145689-28145780,
28145988-28146737,28146969-28147100,28147149-28147247,
28147977-28148132,28150187-28150317,28150798-28151254,
28151327-28151668,28152137-28153001,28153112-28153170,
28153806-28154261,28154835-28154873,28155016-28155201
Length = 1727
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 557 CQHTSRCRRRYSCPRTETFQ 616
C+ S+CRRRY T TFQ
Sbjct: 1707 CKEPSKCRRRYFANPTSTFQ 1726
>04_04_0699 - 27345243-27346199
Length = 318
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/57 (28%), Positives = 22/57 (38%)
Frame = +3
Query: 534 SNYSGKKRANTPAVAGEDTPAPAPKPSRGRFNRPSSRAVEPEAEXQNESVQPXRSNR 704
S + A A AG+ P+P P S F+ SS + + S P R R
Sbjct: 215 SEIAAAAAAAAAAAAGDKRPSPEPATSESSFSSSSSCTTTTTSSSTSSSGSPKRRKR 271
>04_04_0318 +
24347364-24348826,24348920-24349048,24349158-24349293,
24349447-24349535,24349631-24349742,24349836-24349942,
24350033-24350129
Length = 710
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 547 VRNVPTHQPLPAKILLPPHRNLPEEDSTDHHQEPWNLKP 663
V +VPT PLP LPP ++PE + + + P +++P
Sbjct: 163 VDSVPTELPLPPPPPLPPQDHIPERLAVE--KSPMDVEP 199
>01_06_1179 - 35161229-35162368
Length = 379
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 549 KKRANTP-AVAGEDTPAPAPKPSRGRFNRPSSR 644
K RANTP VA + P P P P+ R P+++
Sbjct: 273 KTRANTPRIVAKKSKPPPPPPPAAARSPAPTTK 305
>11_06_0611 + 25461469-25461655,25461670-25462238
Length = 251
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 555 RANTPAVAGEDTPAPAPKPSRGRFNRPSSRAVEPEAEXQNESVQPXRSNRFS 710
RA+ A AG D AP P P R R + R E E E + + +N S
Sbjct: 181 RASPLAPAGSDGMAPPPLPGRRRRRCYTHRNGERERELERNGERERENNLIS 232
>07_03_1689 +
28710936-28711129,28711283-28711341,28711858-28711892,
28712123-28712226,28712325-28712397,28712495-28712553,
28712656-28712721,28712815-28712898,28712995-28713059,
28713152-28713342,28713522-28713612,28714076-28714134,
28714732-28714872,28715214-28715321
Length = 442
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -1
Query: 532 LAASPPASEGAADSVTVEPRDLASAACARFFFRISSKSLLLLNGL 398
L SPPA AA + +EP L +AA R + + L L NGL
Sbjct: 16 LVVSPPAVAAAASRMRIEP--LPTAALRRLYDTSNYGKLQLNNGL 58
>01_06_0088 + 26305326-26306372
Length = 348
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -1
Query: 586 SSPATAGVLARFLPL*FDLAASPPASEGAADSVTVEPRDLASAACARFFFRIS 428
S P VL LP+ L+ PPA++ + S P CAR FF +S
Sbjct: 87 SLPLVPFVLCASLPIKLRLSQQPPAAKRSPSSPPPPPLADFLRPCARSFFFLS 139
>12_02_1279 + 27510605-27513301
Length = 898
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 466 ASAACARFFFRISSKSLLLLN 404
A+ +C FF+R SSKS LLN
Sbjct: 400 ANCSCLGFFYRNSSKSCFLLN 420
>10_08_0106 + 14842748-14843085,14843122-14843250,14844145-14844211,
14847177-14847324,14847998-14848097,14848306-14848384,
14848527-14848687,14848829-14848908,14849319-14849475,
14849575-14849723,14849909-14850076,14850426-14850719,
14851002-14851046,14851213-14851462,14851707-14851835,
14852799-14853039,14853977-14854642
Length = 1066
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 411 SNNDLLEILKKK-RAQAAEAKSRGSTVTEXXXXXXXXXXXXKSNYSGKKRANTPAVAGED 587
+NND ++ K R+++++ R + +S+ SGKKR+++ +D
Sbjct: 833 ANNDSTTSMRPKARSRSSQPADRSAPPPPASPDRHSRRSPHRSSGSGKKRSSSDRY--DD 890
Query: 588 TPAPAPKPSRGR 623
P P P P R
Sbjct: 891 LPLPPPPPPASR 902
>07_01_0442 - 3348638-3349126,3349978-3350322
Length = 277
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = -1
Query: 610 GFGAGAGVSSPATAGVLARFLPL*FDLAASPPASEGAADSVTVEPRDLASAACARFFFRI 431
G G G G P+ G+L ++P F AA+ A GA V V + L++A F RI
Sbjct: 57 GGGGGGGALLPSRQGMLVAYVPA-FVAAAASFAVPGAV--VGVRAQVLSAALTVHFLKRI 113
>04_02_0026 +
8708765-8710935,8711021-8711272,8711353-8711463,
8711553-8711634,8711909-8712100
Length = 935
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +1
Query: 559 PTHQPLPAKILLPPHRNLPEEDSTDHHQEPW-NLKPXNRTSPFNXHDPTGSPDEET 723
P HQP P + PP + P + P + TSP H P P +T
Sbjct: 492 PRHQPSPPPLRSPPRQPTPPPSPSQQPPLPAPQPVQASPTSPAKQHAPPAPPSVQT 547
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,151,249
Number of Sequences: 37544
Number of extensions: 429309
Number of successful extensions: 1778
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1751
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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