Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_L04
(790 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97989-3|CAI22298.1| 574|Homo sapiens TRAF3 interacting protein... 32 2.1
AL008730-3|CAA15506.1| 574|Homo sapiens TRAF3 interacting prote... 32 2.1
AF274303-1|AAG15367.1| 574|Homo sapiens NFkB-activating protein... 32 2.1
AF272151-1|AAG15407.1| 574|Homo sapiens adaptor protein CIKS pr... 32 2.1
AF136405-1|AAF67445.1| 574|Homo sapiens unknown protein. 32 2.1
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 32 2.7
BC016975-1|AAH16975.1| 199|Homo sapiens C15orf37 protein protein. 31 6.3
X95701-1|CAA64997.1| 449|Homo sapiens GATA-6 DNA binding protei... 30 8.3
U66075-1|AAC50941.1| 449|Homo sapiens hGATA-6 protein. 30 8.3
D87811-1|BAA22621.1| 449|Homo sapiens GATA-6 protein. 30 8.3
BC131517-1|AAI31518.1| 503|Homo sapiens ESRRB protein protein. 30 8.3
AY451390-1|AAS15572.1| 508|Homo sapiens estrogen receptor-relat... 30 8.3
AK223547-1|BAD97267.1| 595|Homo sapiens GATA binding protein 6 ... 30 8.3
>Z97989-3|CAI22298.1| 574|Homo sapiens TRAF3 interacting protein 2
protein.
Length = 574
Score = 32.3 bits (70), Expect = 2.1
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +1
Query: 508 PMLVATLPNRITVVRNVPTHQPLPAKILLPPHRNLPEEDSTDHHQEPWNLKPXNRTSPFN 687
P L T NR V V +P P+++L P PEE+S N+ P + ++P
Sbjct: 3 PQLQETRMNRSIPVE-VDESEPYPSQLLKPIPEYSPEEESEPPAPNIRNMAPNSLSAPTM 61
Query: 688 XHDPTG--SPDEETIKNA 735
H+ +G S T+K A
Sbjct: 62 LHNSSGDFSQAHSTLKLA 79
>AL008730-3|CAA15506.1| 574|Homo sapiens TRAF3 interacting protein
2 protein.
Length = 574
Score = 32.3 bits (70), Expect = 2.1
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +1
Query: 508 PMLVATLPNRITVVRNVPTHQPLPAKILLPPHRNLPEEDSTDHHQEPWNLKPXNRTSPFN 687
P L T NR V V +P P+++L P PEE+S N+ P + ++P
Sbjct: 3 PQLQETRMNRSIPVE-VDESEPYPSQLLKPIPEYSPEEESEPPAPNIRNMAPNSLSAPTM 61
Query: 688 XHDPTG--SPDEETIKNA 735
H+ +G S T+K A
Sbjct: 62 LHNSSGDFSQAHSTLKLA 79
>AF274303-1|AAG15367.1| 574|Homo sapiens NFkB-activating protein
ACT1 protein.
Length = 574
Score = 32.3 bits (70), Expect = 2.1
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +1
Query: 508 PMLVATLPNRITVVRNVPTHQPLPAKILLPPHRNLPEEDSTDHHQEPWNLKPXNRTSPFN 687
P L T NR V V +P P+++L P PEE+S N+ P + ++P
Sbjct: 3 PQLQETRMNRSIPVE-VDESEPYPSQLLKPIPEYSPEEESEPPAPNIRNMAPNSLSAPTM 61
Query: 688 XHDPTG--SPDEETIKNA 735
H+ +G S T+K A
Sbjct: 62 LHNSSGDFSQAHSTLKLA 79
>AF272151-1|AAG15407.1| 574|Homo sapiens adaptor protein CIKS
protein.
Length = 574
Score = 32.3 bits (70), Expect = 2.1
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +1
Query: 508 PMLVATLPNRITVVRNVPTHQPLPAKILLPPHRNLPEEDSTDHHQEPWNLKPXNRTSPFN 687
P L T NR V V +P P+++L P PEE+S N+ P + ++P
Sbjct: 3 PQLQETRMNRSIPVE-VDESEPYPSQLLKPIPEYSPEEESEPPAPNIRNMAPNSLSAPTM 61
Query: 688 XHDPTG--SPDEETIKNA 735
H+ +G S T+K A
Sbjct: 62 LHNSSGDFSQAHSTLKLA 79
>AF136405-1|AAF67445.1| 574|Homo sapiens unknown protein.
Length = 574
Score = 32.3 bits (70), Expect = 2.1
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +1
Query: 508 PMLVATLPNRITVVRNVPTHQPLPAKILLPPHRNLPEEDSTDHHQEPWNLKPXNRTSPFN 687
P L T NR V V +P P+++L P PEE+S N+ P + ++P
Sbjct: 3 PQLQETRMNRSIPVE-VDESEPYPSQLLKPIPEYSPEEESEPPAPNIRNMAPNSLSAPTM 61
Query: 688 XHDPTG--SPDEETIKNA 735
H+ +G S T+K A
Sbjct: 62 LHNSSGDFSQAHSTLKLA 79
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 31.9 bits (69), Expect = 2.7
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +3
Query: 441 KKRAQAAEAKSR-GSTVTEXXXXXXXXXXXXKSNYSGKKRANTPAVAGEDTPAPAPKPSR 617
K+++Q +SR GS+ T+ S+ K+++ TP+ + +P PK
Sbjct: 835 KQKSQTPPRRSRSGSSQTKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKS 894
Query: 618 GRFNRPSSRAVEPEAEXQNESVQPXRSNRF 707
G R S P+A Q SV P R + F
Sbjct: 895 GTPPRQGS-ITSPQANEQ--SVTPQRRSCF 921
>BC016975-1|AAH16975.1| 199|Homo sapiens C15orf37 protein protein.
Length = 199
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/51 (39%), Positives = 24/51 (47%)
Frame = +3
Query: 543 SGKKRANTPAVAGEDTPAPAPKPSRGRFNRPSSRAVEPEAEXQNESVQPXR 695
S +K A+TP TPA AP SR R R S + PEA + P R
Sbjct: 125 SRRKEASTPL-----TPAEAPAYSRARPRRQGSPSAGPEAPLATDEPPPQR 170
>X95701-1|CAA64997.1| 449|Homo sapiens GATA-6 DNA binding protein
protein.
Length = 449
Score = 30.3 bits (65), Expect = 8.3
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 610 GFGAGAGVSSPATAGVLARFLPL*FDLAASPPASEGAA 497
G AG G + P AG A + F + SPP + GAA
Sbjct: 93 GGAAGGGAAGPGGAGSAAAHVSARFPYSPSPPMANGAA 130
>U66075-1|AAC50941.1| 449|Homo sapiens hGATA-6 protein.
Length = 449
Score = 30.3 bits (65), Expect = 8.3
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 610 GFGAGAGVSSPATAGVLARFLPL*FDLAASPPASEGAA 497
G AG G + P AG A + F + SPP + GAA
Sbjct: 93 GGAAGGGAAGPGGAGSAAAHVSARFPYSPSPPMANGAA 130
>D87811-1|BAA22621.1| 449|Homo sapiens GATA-6 protein.
Length = 449
Score = 30.3 bits (65), Expect = 8.3
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 610 GFGAGAGVSSPATAGVLARFLPL*FDLAASPPASEGAA 497
G AG G + P AG A + F + SPP + GAA
Sbjct: 93 GGAAGGGAAGPGGAGSAAAHVSARFPYSPSPPMANGAA 130
>BC131517-1|AAI31518.1| 503|Homo sapiens ESRRB protein protein.
Length = 503
Score = 30.3 bits (65), Expect = 8.3
Identities = 16/70 (22%), Positives = 30/70 (42%)
Frame = +3
Query: 435 LKKKRAQAAEAKSRGSTVTEXXXXXXXXXXXXKSNYSGKKRANTPAVAGEDTPAPAPKPS 614
L+ A+ + + RGS E + ++ + ++N+P + +P P
Sbjct: 426 LEMVEAKVGQEQLRGSPKDERMSSHDGKCPFQSAAFTSRDQSNSPGIPNPRPSSPTPLNE 485
Query: 615 RGRFNRPSSR 644
RGR PS+R
Sbjct: 486 RGRQISPSTR 495
>AY451390-1|AAS15572.1| 508|Homo sapiens estrogen receptor-related
receptor beta2-delta-10 protein.
Length = 508
Score = 30.3 bits (65), Expect = 8.3
Identities = 16/70 (22%), Positives = 30/70 (42%)
Frame = +3
Query: 435 LKKKRAQAAEAKSRGSTVTEXXXXXXXXXXXXKSNYSGKKRANTPAVAGEDTPAPAPKPS 614
L+ A+ + + RGS E + ++ + ++N+P + +P P
Sbjct: 426 LEMLEAKVGQEQLRGSPKDERMSSHDGKCPFQSAAFTSRDQSNSPGIPNPRPSSPTPLNE 485
Query: 615 RGRFNRPSSR 644
RGR PS+R
Sbjct: 486 RGRQISPSTR 495
>AK223547-1|BAD97267.1| 595|Homo sapiens GATA binding protein 6
variant protein.
Length = 595
Score = 30.3 bits (65), Expect = 8.3
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 610 GFGAGAGVSSPATAGVLARFLPL*FDLAASPPASEGAA 497
G AG G + P AG A + F + SPP + GAA
Sbjct: 239 GGAAGGGAAGPGGAGSAAAHVSARFPYSPSPPMANGAA 276
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,287,556
Number of Sequences: 237096
Number of extensions: 2311519
Number of successful extensions: 7604
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7492
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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