Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_L03
         (455 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061058-1|AAL28606.1|  516|Drosophila melanogaster LD02646p pro...    29   3.9  
AE013599-648|AAF59092.1|  516|Drosophila melanogaster CG2110-PA ...    29   3.9  
AY119223-1|AAM51083.1|  199|Drosophila melanogaster SD16838p pro...    28   5.2  
AE014134-1483|AAF52659.1|  199|Drosophila melanogaster CG17295-P...    28   5.2  

>AY061058-1|AAL28606.1|  516|Drosophila melanogaster LD02646p
           protein.
          Length = 516

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -2

Query: 340 IQNVLTSSSYLFLTNLCNVLRSWCYHG 260
           IQN+L+SSS L+  +L + LR W   G
Sbjct: 91  IQNILSSSSLLYKEHLYSFLRPWLGDG 117


>AE013599-648|AAF59092.1|  516|Drosophila melanogaster CG2110-PA
           protein.
          Length = 516

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -2

Query: 340 IQNVLTSSSYLFLTNLCNVLRSWCYHG 260
           IQN+L+SSS L+  +L + LR W   G
Sbjct: 91  IQNILSSSSLLYKEHLYSFLRPWLGDG 117


>AY119223-1|AAM51083.1|  199|Drosophila melanogaster SD16838p
           protein.
          Length = 199

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 171 PDALKPSRGATIGIKNPPMQRTAPPTMLTIRASEKSH 61
           PD+ K   GA    KNP ++   P    T+R   ++H
Sbjct: 48  PDSPKAKEGAMTNGKNPEIKLAVPKCNTTVRKQNEAH 84


>AE014134-1483|AAF52659.1|  199|Drosophila melanogaster CG17295-PA
           protein.
          Length = 199

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 171 PDALKPSRGATIGIKNPPMQRTAPPTMLTIRASEKSH 61
           PD+ K   GA    KNP ++   P    T+R   ++H
Sbjct: 48  PDSPKAKEGAMTNGKNPEIKLAVPKCNTTVRKQNEAH 84


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,765,251
Number of Sequences: 53049
Number of extensions: 395793
Number of successful extensions: 863
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)