Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_K22
         (768 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    96   9e-22
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   7.9  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   7.9  

>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 96.3 bits (229), Expect = 9e-22
 Identities = 42/92 (45%), Positives = 58/92 (63%)
 Frame = +3

Query: 255 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXX 434
           +KDS+D   +L  AGD+LVV+DF ATWCGPCK+I PKL+E   +                
Sbjct: 5   VKDSEDFNNKLEAAGDQLVVVDFFATWCGPCKVIAPKLEEFQNKYADKIVVVKVDVDECE 64

Query: 435 XXASEYNINSMPTFVFVKNGKKLDEFSGANVD 530
             A++YNI SMPTF+F+K  + + +FSGAN +
Sbjct: 65  ELAAQYNIASMPTFLFIKRKEVVGQFSGANAE 96


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
 Frame = +3

Query: 156 TYNKYLALFSS*---KIYKTWRCAMTL*KQPKM 245
           T NKY A   S    K+   WRCA T+ K  K+
Sbjct: 786 TLNKYCAKLPSDTFTKLTPIWRCATTVRKGRKL 818


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +2

Query: 185  FLKDLQNLAVRDDALKTAQDVHSHQRFRRPEDKAGGSRRQARRDRLHGD 331
            FLK+ +N  +R +  +  +           +D AGG   QA RD+   D
Sbjct: 1584 FLKEDENNFMRGEVPRMTKSFAGFSTVDGRKDMAGGRLLQAARDQEAAD 1632


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,831
Number of Sequences: 2352
Number of extensions: 12649
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)