Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_K21
         (719 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23510-7|AAC46785.1|  261|Caenorhabditis elegans Hypothetical pr...   115   4e-26
U23510-8|ABC71804.1|  128|Caenorhabditis elegans Hypothetical pr...    91   6e-19
Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AF038605-6|AAB92018.2|  247|Caenorhabditis elegans Hypothetical ...    29   4.4  
Z30662-6|CAE17936.1|  295|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z82282-8|CAB05278.1|  575|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>U23510-7|AAC46785.1|  261|Caenorhabditis elegans Hypothetical
           protein R12C12.6a protein.
          Length = 261

 Score =  115 bits (276), Expect = 4e-26
 Identities = 71/214 (33%), Positives = 109/214 (50%), Gaps = 27/214 (12%)
 Frame = +3

Query: 132 ILVFLGTCIFFVSCFGEQGT---FENKRCKCVCPSPAAVF----NNTADTG--RSPFID- 281
           ++++L   + F+    + GT   FE+ RC+C+CPS         N T  T   R  F   
Sbjct: 48  LMIYLFIALLFLPALSQAGTEANFEDTRCRCICPSLLKFLDLAENTTEKTEGLRRRFYTK 107

Query: 282 -NVPPNKCNCEGLVLPRIGDQLKDRAQE-FCPRCQCKYENRNXXXXXXXXXXXXXXXMLL 455
            N+ P+ C    +V  ++ + + +   + F   C C+YE+RN                +L
Sbjct: 108 TNIEPSHCKPSNIVKDQVSNFVDETHMDAFLANCDCRYESRNTVLLKVVVIFVICVIAVL 167

Query: 456 VGYMGFLICLDPLINKRAMA-SYQEHTNEDDDN---PIPGTSQ----------TMGAT-P 590
            GYM FL+CLDP++ K+ ++ SYQ+H +E +DN     P T            T G T  
Sbjct: 168 TGYMVFLMCLDPMLRKKRLSISYQQHNDEMEDNIFAAAPSTDDESSSASNSMDTQGTTRA 227

Query: 591 RGNVLNRVTHQQDKWKRQVREQRRNIYDRHTMLN 692
           R NVL RV  +Q++W ++V EQRRNI++ HTMLN
Sbjct: 228 RSNVLGRVEAEQNRWMKKVEEQRRNIFEDHTMLN 261


>U23510-8|ABC71804.1|  128|Caenorhabditis elegans Hypothetical
           protein R12C12.6b protein.
          Length = 128

 Score = 91.5 bits (217), Expect = 6e-19
 Identities = 50/125 (40%), Positives = 69/125 (55%), Gaps = 15/125 (12%)
 Frame = +3

Query: 363 FCPRCQCKYENRNXXXXXXXXXXXXXXXMLLVGYMGFLICLDPLINKRAMA-SYQEHTNE 539
           F   C C+YE+RN                +L GYM FL+CLDP++ K+ ++ SYQ+H +E
Sbjct: 4   FLANCDCRYESRNTVLLKVVVIFVICVIAVLTGYMVFLMCLDPMLRKKRLSISYQQHNDE 63

Query: 540 DDDN---PIPGTSQ----------TMGAT-PRGNVLNRVTHQQDKWKRQVREQRRNIYDR 677
            +DN     P T            T G T  R NVL RV  +Q++W ++V EQRRNI++ 
Sbjct: 64  MEDNIFAAAPSTDDESSSASNSMDTQGTTRARSNVLGRVEAEQNRWMKKVEEQRRNIFED 123

Query: 678 HTMLN 692
           HTMLN
Sbjct: 124 HTMLN 128


>Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical
           protein ZK524.4 protein.
          Length = 1016

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
 Frame = +3

Query: 492 LINKRAMASYQEHTNED--------DDNPIPGTSQTMGATPRGNVLNRVTHQQDKWK 638
           L+ +R +ASY+E    +        DD P P  S   GAT R N+ +R   + + W+
Sbjct: 339 LLAERVLASYREEQARELLAKHVEWDDRPDP-ISDNSGATTRSNINSRCRSRSNSWR 394


>Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical
           protein ZK524.4 protein.
          Length = 1016

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
 Frame = +3

Query: 492 LINKRAMASYQEHTNED--------DDNPIPGTSQTMGATPRGNVLNRVTHQQDKWK 638
           L+ +R +ASY+E    +        DD P P  S   GAT R N+ +R   + + W+
Sbjct: 339 LLAERVLASYREEQARELLAKHVEWDDRPDP-ISDNSGATTRSNINSRCRSRSNSWR 394


>AF038605-6|AAB92018.2|  247|Caenorhabditis elegans Hypothetical
           protein C02B10.3 protein.
          Length = 247

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 398 KHHNYKGSGDYCYLGDHVAG 457
           + H Y+ +GD+C  G+H +G
Sbjct: 162 QQHRYRNNGDHCICGNHYSG 181


>Z30662-6|CAE17936.1|  295|Caenorhabditis elegans Hypothetical
           protein T16H12.11 protein.
          Length = 295

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 214 HLQRLFSKVPCSPKQDTKKMHVPRNTKIIYFR 119
           HL ++  ++ C  K+  K+ H   NT  +YFR
Sbjct: 50  HLDKIEMQILCPLKKKIKRFHKESNTLDVYFR 81


>Z82282-8|CAB05278.1|  575|Caenorhabditis elegans Hypothetical
           protein T07G12.11 protein.
          Length = 575

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 534 NEDDDNPIPGTSQTMGATPRGNVLNRVTHQQDK 632
           +E+D++PIP T +   A P    LN+   Q +K
Sbjct: 404 DEEDESPIPSTKKVSFAVPVVQRLNKRNEQMNK 436


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,424,067
Number of Sequences: 27780
Number of extensions: 368609
Number of successful extensions: 1109
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)