Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_K18
         (736 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52...    29   3.8  
12_02_0760 - 22888636-22889407,22889503-22889769,22890001-228903...    28   6.7  
03_05_1019 + 29736644-29736709,29737156-29737515,29737595-297377...    28   8.8  

>02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-523368,
            525209-525401,525978-526330,526693-526791,526864-526935,
            527062-527213,527338-527386,527755-527885,528067-528307,
            528392-528565,528656-528797,529236-529282,529370-529450,
            530170-530271,530345-530440,531437-531444,531575-531616,
            531830-531894,534761-534853,534888-534959,535303-535509,
            536318-537226,537503-538158
          Length = 1429

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = +1

Query: 496  DKTSASDKMFPITLEDIENEVLTISDKKANFSVK 597
            D T+  DK+  ITLED + E+LT  +++ N +++
Sbjct: 1109 DSTN-EDKLVMITLEDTDTEILTQHNEEENLNIE 1141


>12_02_0760 -
           22888636-22889407,22889503-22889769,22890001-22890302,
           22890402-22890512,22890990-22891568,22892026-22892087,
           22892434-22892754,22893434-22893776
          Length = 918

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = +1

Query: 199 QRNFYP-KMGGCR-CTYRNCTVRSDG 270
           QR F+P K+ G R C YR C +R DG
Sbjct: 197 QRFFFPLKVRGSRYCRYRYCFIREDG 222


>03_05_1019 +
           29736644-29736709,29737156-29737515,29737595-29737735,
           29737912-29738044,29738344-29738457,29738553-29738701,
           29740815-29740907,29741019-29741079,29741180-29741512,
           29742149-29742224,29742322-29742421,29743300-29743369,
           29743987-29744082,29744355-29744402,29744427-29744658,
           29745186-29745246,29745265-29745375
          Length = 747

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +1

Query: 439 KLKFEAVPTLNG-PFCEPKEDKTSASDKMFPITLEDIENE 555
           KL    VP++ G P C+P  D     D  +  T+EDI  E
Sbjct: 142 KLGEPPVPSIPGTPVCDPHGDPPLVGDCWYNCTVEDIAGE 181


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,848,081
Number of Sequences: 37544
Number of extensions: 298351
Number of successful extensions: 629
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)