Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_K18
(736 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY052024-1|AAK93448.1| 557|Drosophila melanogaster LD47616p pro... 63 4e-10
AE014296-589|AAF47733.2| 557|Drosophila melanogaster CG14965-PA... 63 4e-10
AE013599-3975|AAN16123.1| 381|Drosophila melanogaster CG32836-P... 31 2.2
AE014134-3155|AAF53840.1| 3781|Drosophila melanogaster CG10631-P... 30 3.8
AE014297-1918|AAF55112.1| 240|Drosophila melanogaster CG14860-P... 29 5.0
AF049659-1|AAC05273.1| 338|Drosophila melanogaster geranylgeran... 29 6.6
AF049658-1|AAC05595.1| 335|Drosophila melanogaster geranylgeran... 29 6.6
AE014298-1193|AAF46385.1| 679|Drosophila melanogaster CG33181-P... 29 6.6
X03810-1|CAA27436.1| 31|Drosophila melanogaster ORF1 protein. 29 8.7
AY061426-1|AAL28974.1| 376|Drosophila melanogaster LD35843p pro... 29 8.7
AY060971-1|AAL28519.1| 244|Drosophila melanogaster GM10122p pro... 29 8.7
AF146797-1|AAD38010.1| 259|Drosophila melanogaster nucleotide e... 29 8.7
AE013599-2074|AAF58127.1| 376|Drosophila melanogaster CG8187-PA... 29 8.7
AE013599-1966|AAF58196.1| 259|Drosophila melanogaster CG10215-P... 29 8.7
>AY052024-1|AAK93448.1| 557|Drosophila melanogaster LD47616p
protein.
Length = 557
Score = 62.9 bits (146), Expect = 4e-10
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +1
Query: 220 MGGCRCTYRNCTVRS--DGVTHMFHYPVFDKVRCHQWLTNAQRLDFLNLKVSQLKNRVVC 393
MGG +C +R+C V S + H F +PV D R W+ N D N S+L + VC
Sbjct: 1 MGGTKCCFRDCPVGSSRNPNMHFFKFPVKDPKRLKDWVRNCSNPDVSNAPPSKLAAKTVC 60
Query: 394 QHHFEDYWFMNFKKEKLKFEAVPTL 468
HF FMN+K ++L PTL
Sbjct: 61 ARHFRAECFMNYKMDRLIPMQTPTL 85
>AE014296-589|AAF47733.2| 557|Drosophila melanogaster CG14965-PA
protein.
Length = 557
Score = 62.9 bits (146), Expect = 4e-10
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +1
Query: 220 MGGCRCTYRNCTVRS--DGVTHMFHYPVFDKVRCHQWLTNAQRLDFLNLKVSQLKNRVVC 393
MGG +C +R+C V S + H F +PV D R W+ N D N S+L + VC
Sbjct: 1 MGGTKCCFRDCPVGSSRNPNMHFFKFPVKDPKRLKDWVRNCSNPDVSNAPPSKLAAKTVC 60
Query: 394 QHHFEDYWFMNFKKEKLKFEAVPTL 468
HF FMN+K ++L PTL
Sbjct: 61 ARHFRAECFMNYKMDRLIPMQTPTL 85
>AE013599-3975|AAN16123.1| 381|Drosophila melanogaster CG32836-PA
protein.
Length = 381
Score = 30.7 bits (66), Expect = 2.2
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -1
Query: 268 HLN--GQCSSDMYTDNPPSLDRNFSVIHGNIQLST 170
HLN G ++Y + PPS+ ++S HG+ LST
Sbjct: 246 HLNDVGHAPDEVYNNRPPSVRSSYSNFHGSRPLST 280
>AE014134-3155|AAF53840.1| 3781|Drosophila melanogaster CG10631-PA
protein.
Length = 3781
Score = 29.9 bits (64), Expect = 3.8
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 232 RCTYRNCTVRSDGVTHMFHYPVFDKVRCHQWLTNAQRLDFLNLKVSQLKNRVVCQHHFED 411
RC +C+ +SDG + +P D +WL N ++ + +LK K+ +C HFE
Sbjct: 2292 RCAVPSCSSKSDGDLQLIPFPKKDATLL-KWLQNT-KISYDHLK---HKSYRICVLHFEP 2346
Query: 412 YWF-MNFKKEKLKFEAVPTLN 471
NF K A+PTL+
Sbjct: 2347 TCLEANFPKA----WAIPTLH 2363
>AE014297-1918|AAF55112.1| 240|Drosophila melanogaster CG14860-PA
protein.
Length = 240
Score = 29.5 bits (63), Expect = 5.0
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = +1
Query: 280 MFHYPVFDKVRCHQWLTNAQRLDFLNLKVSQLKNRVVCQHHFEDYWFMNFKKEKLKFEAV 459
M+ +P+ VR +WL N + +NL S+ VC+ HFE F K K+ AV
Sbjct: 1 MYKFPINPVVR-QKWLDNIADIKDINLFNSR-----VCRRHFET---QCFGKTKVFSWAV 51
Query: 460 PTL 468
PTL
Sbjct: 52 PTL 54
>AF049659-1|AAC05273.1| 338|Drosophila melanogaster geranylgeranyl
pyrophosphate synthaseprotein.
Length = 338
Score = 29.1 bits (62), Expect = 6.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 235 TDNPPSLDRNFSVIHGNIQLSTPGQNNFNFN 143
T + S+ ++ + H N+ S+P QN FN N
Sbjct: 308 TSDSASITQSNQINHNNVSRSSPNQNTFNCN 338
>AF049658-1|AAC05595.1| 335|Drosophila melanogaster geranylgeranyl
pyrophosphate synthaseprotein.
Length = 335
Score = 29.1 bits (62), Expect = 6.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 235 TDNPPSLDRNFSVIHGNIQLSTPGQNNFNFN 143
T + S+ ++ + H N+ S+P QN FN N
Sbjct: 305 TSDSASITQSNQINHNNVSRSSPNQNTFNCN 335
>AE014298-1193|AAF46385.1| 679|Drosophila melanogaster CG33181-PA
protein.
Length = 679
Score = 29.1 bits (62), Expect = 6.6
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 268 HLNGQCSSDMYTDNPPSLDRNFSVIHGNIQLSTPGQNNFNFNLKN 134
++N Q SD D+PP N + + N +T NN N N N
Sbjct: 64 YVNPQAISDNAGDDPPPTTINIGLFNNNNNNNTNNNNNNNNNNNN 108
>X03810-1|CAA27436.1| 31|Drosophila melanogaster ORF1 protein.
Length = 31
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 220 MGGCRCTYRNCTVRS--DGVTHMFHYPVFD 303
MGG +C +R+C V S + H F +PV D
Sbjct: 1 MGGTKCCFRDCPVGSSRNPNMHFFKFPVKD 30
>AY061426-1|AAL28974.1| 376|Drosophila melanogaster LD35843p
protein.
Length = 376
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 220 SLDRNFSVIHGNIQLSTPGQNNFNFNLKNI 131
S D N + +HGNIQ++T G N N L +
Sbjct: 247 SSDLNMTGVHGNIQITTKG-GNLNVQLSEL 275
>AY060971-1|AAL28519.1| 244|Drosophila melanogaster GM10122p
protein.
Length = 244
Score = 28.7 bits (61), Expect = 8.7
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = -1
Query: 355 LKNLISVHLLTIDDILLYQILGNETCVL-LHLN-GQCSSDMYTDNPPSLDRNFSVIHGNI 182
LK++++V L DDI+ ++G +CVL L L + D +L + + + +
Sbjct: 60 LKSILNVPLEFRDDIVPDYVVGRTSCVLYLSLKYHNLNPDYICQRLKALGKMYELRVLLV 119
Query: 181 QLSTPGQNNFNFNLKNICRLS 119
Q+ TP NN LK++ R+S
Sbjct: 120 QVDTPEPNN---ALKSLTRIS 137
>AF146797-1|AAD38010.1| 259|Drosophila melanogaster nucleotide
excision repair proteinERCC1 protein.
Length = 259
Score = 28.7 bits (61), Expect = 8.7
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = -1
Query: 355 LKNLISVHLLTIDDILLYQILGNETCVL-LHLN-GQCSSDMYTDNPPSLDRNFSVIHGNI 182
LK++++V L DDI+ ++G +CVL L L + D +L + + + +
Sbjct: 75 LKSILNVPLEFRDDIVPDYVVGRTSCVLYLSLKYHNLNPDYICQRLKALGKMYELRVLLV 134
Query: 181 QLSTPGQNNFNFNLKNICRLS 119
Q+ TP NN LK++ R+S
Sbjct: 135 QVDTPEPNN---ALKSLTRIS 152
>AE013599-2074|AAF58127.1| 376|Drosophila melanogaster CG8187-PA
protein.
Length = 376
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 220 SLDRNFSVIHGNIQLSTPGQNNFNFNLKNI 131
S D N + +HGNIQ++T G N N L +
Sbjct: 247 SSDLNMTGVHGNIQITTKG-GNLNVQLSEL 275
>AE013599-1966|AAF58196.1| 259|Drosophila melanogaster CG10215-PA
protein.
Length = 259
Score = 28.7 bits (61), Expect = 8.7
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = -1
Query: 355 LKNLISVHLLTIDDILLYQILGNETCVL-LHLN-GQCSSDMYTDNPPSLDRNFSVIHGNI 182
LK++++V L DDI+ ++G +CVL L L + D +L + + + +
Sbjct: 75 LKSILNVPLEFRDDIVPDYVVGRTSCVLYLSLKYHNLNPDYICQRLKALGKMYELRVLLV 134
Query: 181 QLSTPGQNNFNFNLKNICRLS 119
Q+ TP NN LK++ R+S
Sbjct: 135 QVDTPEPNN---ALKSLTRIS 152
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,074,369
Number of Sequences: 53049
Number of extensions: 561826
Number of successful extensions: 1352
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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