Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_K16
(564 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 34 0.017
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 32 0.051
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 32 0.067
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 31 0.12
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 30 0.20
SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr... 28 1.1
SPBC19G7.15 |nup44||nucleoporin Nup44|Schizosaccharomyces pombe|... 28 1.1
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 27 1.4
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 27 1.9
SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ... 27 1.9
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 27 1.9
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 27 2.5
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 2.5
SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 2.5
SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large... 26 3.3
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 26 3.3
SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces ... 26 3.3
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 26 3.3
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 4.4
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 26 4.4
SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 5.8
SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb... 25 5.8
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 7.7
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 25 7.7
SPCC1739.14 |npp106||nucleoporin Npp106|Schizosaccharomyces pomb... 25 7.7
SPAC6F12.09 |rdp1|rdr1|RNA-directed RNA polymerase Rdp1|Schizosa... 25 7.7
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 33.9 bits (74), Expect = 0.017
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Frame = +3
Query: 177 ATSNSTTRPATEFTPRLKVPSRTSTQ--NTPPSKLRVPTST----LPLTDNPSTSPTSLT 338
+++NSTT +T TP V S T+T +TP + + T+T PLT STS TS +
Sbjct: 328 SSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSAS 387
Query: 339 RT 344
T
Sbjct: 388 ST 389
Score = 30.7 bits (66), Expect = 0.15
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +3
Query: 186 NSTTRPATEFTPRLKVPSRTSTQ--NTPPSKLRVPTST----LPLTDNPSTSPTSLTRT 344
NSTT + TP V S T+T +TP + + T+T PLT STS TS + T
Sbjct: 445 NSTTATSASSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASST 503
Score = 27.9 bits (59), Expect = 1.1
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +3
Query: 177 ATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTST----LPLTDNPSTSPTSLTRT 344
ATS S T + ++ +PS T + +TP S T+T PLT ST+ TS + T
Sbjct: 264 ATSASATSSSAQYNTSSLLPSSTPS-STPLSSANSTTATSASSTPLTSVNSTTTTSASST 322
Score = 25.4 bits (53), Expect = 5.8
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +3
Query: 186 NSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREA 365
NST+ + TP S TST + + +S LP + ST +S T A
Sbjct: 493 NSTSATSASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTAT--SA 550
Query: 366 ICPPLT 383
PLT
Sbjct: 551 SSTPLT 556
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 32.3 bits (70), Expect = 0.051
Identities = 23/68 (33%), Positives = 31/68 (45%)
Frame = +3
Query: 180 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPR 359
T NSTT P T P P+ TS+ +TPP ++ + PSTS + T T P
Sbjct: 294 TGNSTT-PVTPTVP----PTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPT 348
Query: 360 EAICPPLT 383
P+T
Sbjct: 349 GNSTTPVT 356
Score = 30.3 bits (65), Expect = 0.20
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +3
Query: 168 PXKATSNSTTRPATEFTPRL--KVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTR 341
P + TS S T + TP + S +S T S +P+++ T + S PT +
Sbjct: 69 PVEITSTSCTTDTSASTPIITESTSSTSSASTTGSSSSPLPSTSTSCTTSTSIPPTGGSS 128
Query: 342 TVTNPREAICPP 377
+++ P PP
Sbjct: 129 SLSTPITPTVPP 140
Score = 29.9 bits (64), Expect = 0.27
Identities = 28/73 (38%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Frame = +3
Query: 180 TSNSTTRPATEFTPRLKVPSRTSTQNTPP---SKLRVPTSTLPL--TDNPSTSPTSL--T 338
T NSTT P T P P+ TS+ +TPP S TS+ PL T T+ TS+ T
Sbjct: 348 TGNSTT-PVTPTVP----PTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPT 402
Query: 339 RTVTNPREAICPP 377
T P PP
Sbjct: 403 GNSTTPVTPTVPP 415
Score = 29.5 bits (63), Expect = 0.36
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +3
Query: 192 TTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAIC 371
T P + + + +P TST +T + +PT++ T + S PT + +++ P
Sbjct: 137 TVPPTSTSSTSIPIPP-TSTSSTDTNSNPLPTTSTSCTTSTSIPPTGGSSSLSTPITPTV 195
Query: 372 PP 377
PP
Sbjct: 196 PP 197
Score = 27.9 bits (59), Expect = 1.1
Identities = 23/66 (34%), Positives = 30/66 (45%)
Frame = +3
Query: 168 PXKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTV 347
P TS S+T + P TST + PP+ ST P+T P+ PTS + T
Sbjct: 262 PIPPTSTSSTDTNSSPLPTTSTSCTTST-SIPPTG----NSTTPVT--PTVPPTSTSSTS 314
Query: 348 TNPREA 365
T P A
Sbjct: 315 TPPPPA 320
Score = 27.9 bits (59), Expect = 1.1
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +3
Query: 168 PXKATSNSTTRP-----ATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTS 332
P +TS+++T P ++ T +PS +++ T S ST P+T P+ PTS
Sbjct: 306 PPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVT--PTVPPTS 363
Query: 333 LTRTVTNPREA 365
+ T T P A
Sbjct: 364 TSSTSTPPPPA 374
Score = 27.5 bits (58), Expect = 1.4
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 192 TTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 356
T P + + + +P TST +T + +PT++ T + S PT + T P
Sbjct: 250 TVPPTSTSSTSIPIPP-TSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTP 303
Score = 27.1 bits (57), Expect = 1.9
Identities = 25/69 (36%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Frame = +3
Query: 168 PXKATSNSTTRPATEFTPRLKVPSRTSTQ--NTPPSKLRVP-TSTLPLTDNPSTS----P 326
P TS S+T + P TST S L P T T+P T STS P
Sbjct: 206 PIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLSTPITPTVPPTSTSSTSIPIPP 265
Query: 327 TSLTRTVTN 353
TS + T TN
Sbjct: 266 TSTSSTDTN 274
Score = 26.6 bits (56), Expect = 2.5
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +3
Query: 180 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 356
+S+ +T T +P T TP + PTST + P + TS T T ++P
Sbjct: 328 SSSPLPSTSTSCTTSTSIPP-TGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSP 385
Score = 25.0 bits (52), Expect = 7.7
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 10/69 (14%)
Frame = +3
Query: 180 TSNSTTRPATEFTPRLKVPSRTSTQNTPP---SKLRVP-TSTLPLTDNPSTS------PT 329
+S STT ++ P TST P S L P T T+P T STS T
Sbjct: 96 SSASTTGSSSSPLPSTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTST 155
Query: 330 SLTRTVTNP 356
S T T +NP
Sbjct: 156 SSTDTNSNP 164
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 31.9 bits (69), Expect = 0.067
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +3
Query: 177 ATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 356
ATS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1608 ATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1667
Score = 30.7 bits (66), Expect = 0.15
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +3
Query: 168 PXKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTV 347
P +TS + + ++P S TS +P S PTS +PS SPTS + +
Sbjct: 1563 PGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSP 1622
Query: 348 TNP 356
T+P
Sbjct: 1623 TSP 1625
Score = 30.7 bits (66), Expect = 0.15
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 180 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 356
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1588 TSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1646
Score = 30.7 bits (66), Expect = 0.15
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 180 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 356
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1602 TSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1660
Score = 30.3 bits (65), Expect = 0.20
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 180 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 356
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1616 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1674
Score = 30.3 bits (65), Expect = 0.20
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 180 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 356
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1623 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1681
Score = 30.3 bits (65), Expect = 0.20
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 180 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 356
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1630 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1688
Score = 30.3 bits (65), Expect = 0.20
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 180 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 356
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1637 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1695
Score = 30.3 bits (65), Expect = 0.20
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 180 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 356
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1644 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1702
Score = 30.3 bits (65), Expect = 0.20
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 180 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 356
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1651 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1709
Score = 30.3 bits (65), Expect = 0.20
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 180 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 356
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1658 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1716
Score = 30.3 bits (65), Expect = 0.20
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 180 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 356
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1665 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1723
Score = 30.3 bits (65), Expect = 0.20
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 180 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 356
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1672 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1730
Score = 30.3 bits (65), Expect = 0.20
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 180 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 356
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1679 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1737
Score = 30.3 bits (65), Expect = 0.20
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 180 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 356
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1686 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1744
Score = 30.3 bits (65), Expect = 0.20
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 180 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 356
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1693 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1751
Score = 27.1 bits (57), Expect = 1.9
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +3
Query: 180 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 356
TS S + + ++P S TS + S PTS +PS SPTS + + T+P
Sbjct: 1581 TSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1639
Score = 27.1 bits (57), Expect = 1.9
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +3
Query: 183 SNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 356
S S T P+ T P+ S T PS PTS +PS SPTS + + T+P
Sbjct: 1598 SYSPTSPSYSATSPSYSPTSPSYSPTSPSYS--PTSPSYSPTSPSYSPTSPSYSPTSP 1653
Score = 25.8 bits (54), Expect = 4.4
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +3
Query: 183 SNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 356
S S T P+ ++P S TS +P S TS +PS SPTS + + T+P
Sbjct: 1577 SYSPTSPS--YSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSP 1632
Score = 25.4 bits (53), Expect = 5.8
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 243 TSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAICPP 377
TS P S PTS +PS SPTS + + T+P + P
Sbjct: 1567 TSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSP 1611
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 31.1 bits (67), Expect = 0.12
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 177 ATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTV-TN 353
+T + T+ T P ++T PP+ T+T+P T + +T+ T+ T N
Sbjct: 57 STHSVTSTNITSIVPPPSTSHNSTTTTVPPTTSMNTTTTVPPTTSLNTTTTTAPPTTHVN 116
Query: 354 PREAICPPLT 383
+ PP T
Sbjct: 117 STTTVVPPTT 126
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 30.3 bits (65), Expect = 0.20
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +3
Query: 168 PXKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTV 347
P A + + ++ PR P ++ +N PP + P LP T P T T+
Sbjct: 411 PSTANDTNGSSSSSSSNPRTSSPLASNAENKPPVAQQSPPVLLP------TLPPIQTTTI 464
Query: 348 TNPREAICPP 377
RE PP
Sbjct: 465 QTSREVAPPP 474
Score = 25.8 bits (54), Expect = 4.4
Identities = 18/67 (26%), Positives = 24/67 (35%)
Frame = +3
Query: 183 SNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPRE 362
+N P + T +PS N PS P+ P N STS S +P
Sbjct: 349 TNPPVNPTIKVTAA--IPSPLQNTNPAPSTFPNPSVASPAFPNSSTSNPSTAPASASPLA 406
Query: 363 AICPPLT 383
+ P T
Sbjct: 407 STLKPST 413
>SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1024
Score = 27.9 bits (59), Expect = 1.1
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 282 PTSTLPLTDNPSTSPTSLTRTVTNPREAICPPL 380
PT TD S PT+L TN E PP+
Sbjct: 529 PTKPFSATDISSVQPTNLPNGSTNGTETFIPPV 561
>SPBC19G7.15 |nup44||nucleoporin Nup44|Schizosaccharomyces pombe|chr
2|||Manual
Length = 403
Score = 27.9 bits (59), Expect = 1.1
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +3
Query: 159 RHHPXKATSNSTTRPATEFTPRLKVPSRTSTQNTPP--SKLRVPTSTLPLTDNPSTSPTS 332
+ P + SN+TT SRT NT P S V T P+ + +T P+S
Sbjct: 71 QQQPTTSFSNTTTNAPQSTVFGQNAASRTGNSNTQPLFSWSTVNNPTKPVDETNATIPSS 130
Query: 333 L 335
L
Sbjct: 131 L 131
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 27.5 bits (58), Expect = 1.4
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Frame = +3
Query: 162 HHPXKATSNSTTRPATEFTPRLKVPSRTSTQNTPP----SKLRVPTSTLPLTDNPSTSPT 329
H P K SN TE + VPS ++ P S +R P+ T P + + T
Sbjct: 360 HSPVKPVSNEQVEQVTEVELSIPVPSIQEAESQKPVLTGSSMRRPSVTSPTFEVAARPLT 419
Query: 330 SL 335
S+
Sbjct: 420 SM 421
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.1 bits (57), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 309 NPSTSPTSLTRTVTNPREAICPPL--TQFPRRS 401
NP ++P S R+ +NPR+ PP T +P RS
Sbjct: 23 NPVSTPNSHFRSASNPRKRREPPTIDTGYPDRS 55
>SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1877
Score = 27.1 bits (57), Expect = 1.9
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 207 TEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDN--PSTSPTSLTRTVTN 353
T T + + S +TP S L P L ++DN S+S T+ T++N
Sbjct: 416 TAITSIYQFANLLSPADTPDSYLAAPKERLSISDNMSSSSSQTATVNTISN 466
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 27.1 bits (57), Expect = 1.9
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 234 PSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTN 353
P+ ++ T S VPT T+ + S++P SLT + T+
Sbjct: 248 PTESTFYETKSSTSSVPTQTIDSSSFTSSTPVSLTSSSTS 287
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 26.6 bits (56), Expect = 2.5
Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 6/104 (5%)
Frame = +3
Query: 234 PSRTSTQNTPPSK-LRVPTSTLPLTDNPSTSPTSLTRT----VTNPREAICPPLTQFPRR 398
PS +S + PS + +PT +L + NPS +P V N +I FP
Sbjct: 269 PSLSSQPVSVPSNTINIPTDSLSIVSNPSQTPAKFDSNRISQVPNSDYSIYSNFNNFPIA 328
Query: 399 SXXXXXXXXXXXXXXXXWKEKSSPTC*DKSRQQHTATS-TNETD 527
+ + S PT S +TS TN D
Sbjct: 329 NHAPSFPQSSVKKLDSSFSPTSLPTFTTNSASSGLSTSYTNNND 372
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 26.6 bits (56), Expect = 2.5
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 240 RTSTQNTPPSKLRVPTSTLPLTDNPS--TSPTSLTRTVTNPREAICPPLTQFP 392
R + + PP P +++PL N ++ S + T +NP + PP++ P
Sbjct: 113 RLALKRPPPDSHDSPNNSIPLMANSCLLSADNSSSSTTSNPN--VAPPISTLP 163
>SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 462
Score = 26.6 bits (56), Expect = 2.5
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +3
Query: 168 PXKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRT 344
P K+ S++ P + R+K+P+ +++ P L+VP T +P +PTS ++T
Sbjct: 196 PKKSLSSTIKSPPS----RVKLPTSILSKSPP---LKVPNKNRSSTFSPLRTPTSSSKT 247
Score = 25.4 bits (53), Expect = 5.8
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 11/60 (18%)
Frame = +1
Query: 379 SPNSRGDRPRSCLHRGPPPQ-----------PLRRGKKSRRQLVRISQDNNIPPLVQTKL 525
SP SR P S L + PP + PLR S + V + PP ++TKL
Sbjct: 206 SPPSRVKLPTSILSKSPPLKVPNKNRSSTFSPLRTPTSSSKTFVIVDHSTPSPPSIRTKL 265
>SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large
subunit Rpc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1405
Score = 26.2 bits (55), Expect = 3.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 216 TPRLKVPSRTSTQNTPPSKLRVPTST 293
TP+LK+PS+ T N ++ V TS+
Sbjct: 1169 TPKLKIPSQQVTVNNTLQQIHVHTSS 1194
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 26.2 bits (55), Expect = 3.3
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +3
Query: 207 TEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSL-TRTVTNPREA 365
T TP P+ S + PP R+P LP P+S T+ REA
Sbjct: 33 TVSTPAFMEPAPVSKKPLPPPTRRLPRKPLPFRSTSLQPPSSQPPAPPTHQREA 86
>SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 245
Score = 26.2 bits (55), Expect = 3.3
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 282 PTSTLPLTDNPSTSPTSLTRTVTNPREAICPPLTQ 386
PT T P PSTS +S T T T P + P T+
Sbjct: 168 PTQTSP--GKPSTSESSQTDTSTRPANSQTPTTTR 200
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 26.2 bits (55), Expect = 3.3
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +3
Query: 141 SGQIQLRHHPXKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTST 293
+G + +H P K + + P+T P V +S+ ++PPS P++T
Sbjct: 383 TGLLSKQHRPRKNINFTPLPPSTPSKPSTFVRPHSSSTDSPPSP-STPSNT 432
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 4.4
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +3
Query: 174 KATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTS 332
K+ S + PAT T K +T + P++T + PST PTS
Sbjct: 515 KSKSAAYHYPATTETVSSKAARSATTPAYVGGATKTPSTTKAVESTPSTLPTS 567
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 25.8 bits (54), Expect = 4.4
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +3
Query: 180 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKL---RVPTSTLPLT-DNPSTSPTSLTRTV 347
T++++ PAT + TST PP+ + VPT+T T P + T+LT T
Sbjct: 165 TTSTSCNPATVLI--VTTSGSTSTSCPPPTTILIVTVPTTTTTTTVGYPGSVTTTLTGTP 222
Query: 348 TN 353
+N
Sbjct: 223 SN 224
>SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 615
Score = 25.4 bits (53), Expect = 5.8
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +3
Query: 183 SNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPRE 362
+NST + TE +P ++P Q PP+K +P T+ ST P+ T PR
Sbjct: 420 NNSTPKEETEESPSTELPETGKEQ--PPNKAE---PAVP-TEASSTKPSEAAEEST-PRF 472
Query: 363 AICP 374
++ P
Sbjct: 473 SVRP 476
>SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1283
Score = 25.4 bits (53), Expect = 5.8
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +3
Query: 150 IQLRHHPXKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTD 308
+ + P T+ S ++P+ TP+ ++ S N + T++LP+TD
Sbjct: 88 LTISSQPLIHTNTSISKPSQTATPQNTNTTQVSLTNGTTTNSYSNTNSLPITD 140
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.0 bits (52), Expect = 7.7
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 8/49 (16%)
Frame = +3
Query: 237 SRTSTQNTPPSKLRVPTST--------LPLTDNPSTSPTSLTRTVTNPR 359
SR + + S L PTST P DNPS+S S+ R+ + R
Sbjct: 483 SRAALSSRSQSNLLSPTSTGASNQPNYSPFADNPSSSNVSIPRSSSEAR 531
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 25.0 bits (52), Expect = 7.7
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = +3
Query: 168 PXKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTV 347
P T+P + + +R T T S R P+ + + S S +R +
Sbjct: 457 PLLKICQEATQPKSLYRSASAAANRPKTATTTDSVNRTPSQRGRVAVPSTPSVRSASRAM 516
Query: 348 TNPREAICPPL--TQFPRRS 401
T+PR + P + TQ P RS
Sbjct: 517 TSPRTPL-PRVKNTQNPSRS 535
>SPCC1739.14 |npp106||nucleoporin Npp106|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 933
Score = 25.0 bits (52), Expect = 7.7
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 139 PVVKSSYDITPXRPLPIQLRDR 204
P+ SY P PLP QLRDR
Sbjct: 427 PLYFYSYAKNPSLPLPKQLRDR 448
>SPAC6F12.09 |rdp1|rdr1|RNA-directed RNA polymerase
Rdp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1215
Score = 25.0 bits (52), Expect = 7.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 555 KSNSLFPTLCQFRLY*WRYVVVLTYPNKL 469
K++ +FP+ QFR+ ++ V+ L P KL
Sbjct: 632 KNHDMFPSAFQFRMGGYKGVLSLAPPTKL 660
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,990,849
Number of Sequences: 5004
Number of extensions: 37784
Number of successful extensions: 232
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 238029836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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