Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_K12
         (728 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           31   0.037
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    28   0.34 
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    27   0.79 
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    27   0.79 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   2.4  
AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    25   3.2  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          24   4.2  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    24   5.5  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   9.7  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 31.1 bits (67), Expect = 0.037
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +3

Query: 207  KDWDTEKEMFIASNRSLAEFNLGKEPELERMKAE 308
            +DWDTE+E   ASNR  AE     + E +  + E
Sbjct: 1076 RDWDTEREQRAASNREEAEIQQQLQREEDERRTE 1109


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 27.9 bits (59), Expect = 0.34
 Identities = 22/88 (25%), Positives = 42/88 (47%)
 Frame = +3

Query: 207 KDWDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQLCTRIQELLDDYKTKS 386
           K W   +E+F+  + +L +  L K+   E+ +   Q K E+ E +  R +E L+  K K 
Sbjct: 228 KAWLEYEELFLLYSATLKDLKLAKKCTEEKEQQYNQFKQEM-EAILARKKE-LETSKAKQ 285

Query: 387 AGISPDTTHALLQTAAAESEEQSDNIAR 470
             I   +T   + +   ++E   D I++
Sbjct: 286 VAIGQRSTDE-INSLEEKTERLEDTISK 312



 Score = 26.6 bits (56), Expect = 0.79
 Identities = 24/97 (24%), Positives = 43/97 (44%)
 Frame = +3

Query: 174 FESVLKDVKQVKDWDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQLCTRI 353
           + + LKD+K  K    EKE      +   E  L ++ ELE  KA   ++  +G++    I
Sbjct: 240 YSATLKDLKLAKKCTEEKEQQYNQFKQEMEAILARKKELETSKA---KQVAIGQRSTDEI 296

Query: 354 QELLDDYKTKSAGISPDTTHALLQTAAAESEEQSDNI 464
             L  + KT+    +       L  A A+++E+   +
Sbjct: 297 NSL--EEKTERLEDTISKQKRELMDALAKADERKTEL 331


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 26.6 bits (56), Expect = 0.79
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 294 RMKAELQEKSELGEQLCTRIQELLDDYKTKSAGISPDTT 410
           RMK EL+ K    + L   + ++ DD++   +GIS  TT
Sbjct: 363 RMK-ELELKERSSKSLLANVLDIDDDFRHPCSGISGSTT 400


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 26.6 bits (56), Expect = 0.79
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 294 RMKAELQEKSELGEQLCTRIQELLDDYKTKSAGISPDTT 410
           RMK EL+ K    + L   + ++ DD++   +GIS  TT
Sbjct: 363 RMK-ELELKERSSKSLLANVLDIDDDFRHPCSGISGSTT 400


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 30/151 (19%), Positives = 60/151 (39%)
 Frame = +3

Query: 141  ELKEMLNDDAKFESVLKDVKQVKDWDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEK 320
            ELK M  D A     +  +K+  DW  E+   +A   S  E    K   LE   AE ++ 
Sbjct: 813  ELKRMHMDVASLTQQMPRLKEQVDWQAER---VARTHSDPE----KVRALEAKVAECKQA 865

Query: 321  SELGEQLCTRIQELLDDYKTKSAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVD 500
             +        +Q+ +D Y T+      ++   +LQT      +Q D ++ +     + + 
Sbjct: 866  FDSSSTKADAMQKNVDRY-TEQINEITNSKVKVLQTKINGLGKQIDKLSANISKLTVEIK 924

Query: 501  KFLEDFEPIRKQMHIRKYKAEKMSELLRNSN 593
                + +  + +++  + + E     +R  N
Sbjct: 925  TSERNVQKSKDKINSMEDEVEAAQSAIRKGN 955


>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 600 HXDCCFSTILTFSRLCTSL 544
           H +CC    LTFS  C  L
Sbjct: 104 HMECCSGNCLTFSYKCVPL 122



 Score = 24.2 bits (50), Expect = 4.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 600 HXDCCFSTILTFSRLCTSLYA 538
           H DCC  + L+FS  C  + A
Sbjct: 38  HRDCCSGSCLSFSYKCVPVPA 58


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 585 FSTILTFSRLCTSLYAFVYGW 523
           F  +   +R+CT   +FV GW
Sbjct: 441 FEAVYQLTRMCTIRMSFVKGW 461


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = +3

Query: 591 NXNAYGNGATKPYLPYSNYLPSQNPQSLPYPVGPLNMPMPXMYG 722
           N +  G G   P  P S+++   +P S     GP++      YG
Sbjct: 189 NNSHMGGGGGGPNSPISSHMGPNSPMSSVSSPGPISSNPQSPYG 232



 Score = 23.0 bits (47), Expect = 9.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 585 FSTILTFSRLCTSLYAFVYGW 523
           F  +   +++CT   +FV GW
Sbjct: 409 FEAVYELTKMCTIRMSFVKGW 429


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 279 EPELERMKAELQEKSELGEQLCTRIQEL 362
           E ELER+K  + EK +  EQ+  R + +
Sbjct: 327 EQELERLKITIAEKEKELEQVRPRYEAM 354


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,741
Number of Sequences: 2352
Number of extensions: 10064
Number of successful extensions: 22
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)