Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_K06
(705 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid aminotr... 105 8e-24
SPBC3H7.01 |spo14|stl1, SPBP16F5.01c|WD repeat protein Spo14|Sch... 32 0.070
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 28 1.1
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.5
SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyc... 28 1.5
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 27 3.5
SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Ma... 27 3.5
SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inosito... 26 4.6
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 26 6.0
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 25 8.0
SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase Pmp1|... 25 8.0
>SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid
aminotransferase Eca39|Schizosaccharomyces pombe|chr
2|||Manual
Length = 380
Score = 105 bits (251), Expect = 8e-24
Identities = 52/110 (47%), Positives = 66/110 (60%)
Frame = +1
Query: 364 QLTPKPEAKELGFGKYFTDHMLKIYYHKELGGWQKPEIMPFENLNIHPAAKALHYAIQLF 543
+L P PE K L FG+ FTDHML + +++E G W PEI+PF L HPA+ HY + F
Sbjct: 25 ELKPLPEWKSLKFGENFTDHMLIMKWNREKG-WSTPEIVPFGKLCFHPASSVFHYGFECF 83
Query: 544 EGLKAYRGVDDKIRLFRPELNMERMNLAAQRSGLPMFDGEELVQCIKRLV 693
EG+KA+R RLFRP N ERM R LP FD EL + I++ V
Sbjct: 84 EGMKAFRDEKGVPRLFRPIKNAERMLSTGTRISLPSFDPAELAEIIRKFV 133
>SPBC3H7.01 |spo14|stl1, SPBP16F5.01c|WD repeat protein
Spo14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 32.3 bits (70), Expect = 0.070
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 509 PRRHFITPYNYLKD*KRTEVLMIKYDCSGRNLTWK 613
P + + YNY+KD KR L +++D S +N W+
Sbjct: 214 PNQSIVAAYNYIKDSKRFASL-VRFDYSSKNQLWR 247
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 589 TIVFYHQHLGTLSILQIIVWRNEVPSRRDVYLSSRMA*SPV 467
T+ FY ++ + +WRN+ P+ + VY +S + SP+
Sbjct: 1318 TLEFYTSVSKEFTLNSLDIWRNDQPNSKFVYQASGLFPSPI 1358
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with
EF hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.9 bits (59), Expect = 1.5
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 505 PAAKALHYAIQLFEGLKAYRGVDDKIRLFRPELNM-ERMNLAAQRSG 642
P A A A Q+F G + G+ +I F+P+ M +R + Q +G
Sbjct: 389 PQAAAQQMAAQMFGGFQQAAGIPSQITGFQPQAMMPQRTGMQPQMTG 435
>SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 920
Score = 27.9 bits (59), Expect = 1.5
Identities = 19/79 (24%), Positives = 31/79 (39%)
Frame = +1
Query: 217 SSSLRYKELEDSVQADHVAPSPTQKPHPQITPEISFKYEDLQVRLAAPYQLTPKPEAKEL 396
S + YK LE T +P + PE + D+ + ++ K EAK +
Sbjct: 270 SLDMDYKPLEPLAPIQEAPVEDTSEPFSSV-PEATLDDSDISTE-SLRKKVLAKMEAKRI 327
Query: 397 GFGKYFTDHMLKIYYHKEL 453
G + + K+Y EL
Sbjct: 328 SSGSSYASTLRKVYDFSEL 346
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 26.6 bits (56), Expect = 3.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 265 HVAPSPTQKPHPQITPE-ISFKYEDLQVRLAAPYQLTPKPEAKE 393
H P PH + T E ++ EDL+ + A+ QLT +A E
Sbjct: 888 HAFPPGPNNPHREKTQEGLNKVLEDLETKKASDVQLTEAEKAAE 931
>SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr
3|||Manual
Length = 963
Score = 26.6 bits (56), Expect = 3.5
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 328 YEDLQVRLAAPYQLTPKPEAKELGFGKYFTDHMLKIYYHKELGGWQK-PEIMP 483
Y+ Q +++P P P + + FG Y H EL +Q+ P +MP
Sbjct: 312 YQAAQSNISSPSSRFPTPYSPSVPFGTYQEKEKSYSQDHAELSYYQQSPSMMP 364
>SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inositol
pyrophosphate synthase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 920
Score = 26.2 bits (55), Expect = 4.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 307 TPEISFKYEDLQVRLAAPYQLTPKPEAKELGFGKYFTDHMLKIYYHKELGG 459
TPE+ ED L+ ++ KP ++ +G+ DH + IY+ K +GG
Sbjct: 172 TPEVKMLDEDT---LSVDGKIIKKPYVEKPVYGE---DHNIYIYFPKSVGG 216
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Frame = +1
Query: 244 EDSVQADHVAPSPTQKPHPQ------ITPEISFKYEDLQVRLAAPYQLTPKP 381
E+S+ A + P T KP+PQ + +S + + L++ + + TP+P
Sbjct: 52 EESMPAPKLFPKLTSKPNPQLNLKDTLNKRVSDRLQALELNKSFDFSGTPRP 103
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.4 bits (53), Expect = 8.0
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +1
Query: 418 DHMLKIYYHKELGGWQKPEIMPFENLNIHPAAKALHYAIQLFEGLKAYRGVDDK 579
+HM H E G P M E P H+ ++ EG + +RG +DK
Sbjct: 309 EHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPFKHHELEEHEGPEHHRGPEDK 362
>SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase
Pmp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 278
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 281 PRKSHTHKLHLKSPSSTKTCKYDSRRRISS 370
P K H+ +L L SPS++++ + + RR S
Sbjct: 240 PEKPHSAQLPLVSPSTSESSMFTNLRRTRS 269
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,941,101
Number of Sequences: 5004
Number of extensions: 64138
Number of successful extensions: 177
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 327172622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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