Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_K04
         (464 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q961C4 Cluster: LD23619p; n=4; Diptera|Rep: LD23619p - ...    81   2e-14
UniRef50_UPI0000DB78C2 Cluster: PREDICTED: similar to CG18410-PA...    69   7e-11
UniRef50_UPI0000D55740 Cluster: PREDICTED: similar to CG18410-PA...    62   4e-09

>UniRef50_Q961C4 Cluster: LD23619p; n=4; Diptera|Rep: LD23619p -
           Drosophila melanogaster (Fruit fly)
          Length = 355

 Score = 80.6 bits (190), Expect = 2e-14
 Identities = 38/67 (56%), Positives = 45/67 (67%)
 Frame = +3

Query: 84  DTGFGFKDKAKAEDTLRLLEEHDLNYRRLTVRGLLGRAKRVLSMTXXXXXXXXXXXXXXV 263
           D+ FGFKD  KA +TL+LLE HD+ YR+LTVRGLLGRAKRVL+MT              V
Sbjct: 44  DSKFGFKDMEKALETLKLLESHDMQYRKLTVRGLLGRAKRVLTMTKAEEKLKNINAAIGV 103

Query: 264 FENWLAD 284
           FE WL +
Sbjct: 104 FEKWLEE 110



 Score = 59.7 bits (138), Expect = 3e-08
 Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
 Frame = +3

Query: 72  DDKEDT--GFGFKDKAKAEDTLRLLEEHDLNYRRLTVRGLLGRAKRVLSMTXXXXXXXXX 245
           +DK +T  G GFKDKA AE TL +L E D +Y+RL ++GL+G +KRVLS T         
Sbjct: 125 EDKVETVPGLGFKDKAAAEATLSILAERDPDYQRLAIKGLIGSSKRVLSGTKNEDKITAI 184

Query: 246 XXXXXVFENWL 278
                V E++L
Sbjct: 185 KEGVQVLEDFL 195


>UniRef50_UPI0000DB78C2 Cluster: PREDICTED: similar to CG18410-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG18410-PA - Apis mellifera
          Length = 484

 Score = 68.5 bits (160), Expect = 7e-11
 Identities = 32/72 (44%), Positives = 44/72 (61%)
 Frame = +3

Query: 69  KDDKEDTGFGFKDKAKAEDTLRLLEEHDLNYRRLTVRGLLGRAKRVLSMTXXXXXXXXXX 248
           K +KE++G GFKDK KA  T++LLE  DLNY+   + GL+ RA+RV+S T          
Sbjct: 252 KAEKEESGLGFKDKEKALQTIKLLEGRDLNYQYHAISGLVKRAERVISCTKDEQKLKNIK 311

Query: 249 XXXXVFENWLAD 284
               VF+NW+ D
Sbjct: 312 EAVEVFDNWITD 323



 Score = 55.2 bits (127), Expect = 7e-07
 Identities = 26/70 (37%), Positives = 39/70 (55%)
 Frame = +3

Query: 75  DKEDTGFGFKDKAKAEDTLRLLEEHDLNYRRLTVRGLLGRAKRVLSMTXXXXXXXXXXXX 254
           + E++  GFKDK KA DTL+ L+  D++Y+   +   + RAKR L +T            
Sbjct: 8   EPEESVMGFKDKQKALDTLKALDGRDISYQYHVIASFVSRAKRTLQITRDEEKLANIREA 67

Query: 255 XXVFENWLAD 284
             VFE+WLA+
Sbjct: 68  LKVFEDWLAN 77


>UniRef50_UPI0000D55740 Cluster: PREDICTED: similar to CG18410-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG18410-PA - Tribolium castaneum
          Length = 234

 Score = 62.5 bits (145), Expect = 4e-09
 Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
 Frame = +3

Query: 72  DDKEDT--GFGFKDKAKAEDTLRLLEEHDLNYRRLTVRGLLGRAKRVLSMTXXXXXXXXX 245
           + K DT  G GFKDK KA +T++ LE  D +Y++L ++GL+GRAKR L++T         
Sbjct: 3   ESKPDTVPGLGFKDKEKALETIKNLEGRDPDYQKLAIKGLIGRAKRTLTLTKDKEKLQNI 62

Query: 246 XXXXXVFENWL 278
                VF+ WL
Sbjct: 63  NDAMAVFDEWL 73


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,890,899
Number of Sequences: 1657284
Number of extensions: 2120072
Number of successful extensions: 6697
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6695
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25191138900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)