Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_J24
(530 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U57847-1|AAB02266.1| 84|Homo sapiens ribosomal protein S27 pro... 165 6e-41
L19739-1|AAA59867.1| 84|Homo sapiens metallopanstimulin protein. 165 6e-41
BC070219-1|AAH70219.1| 84|Homo sapiens ribosomal protein S27 (... 165 6e-41
BC002658-1|AAH02658.1| 84|Homo sapiens ribosomal protein S27 (... 165 6e-41
AL358472-19|CAI14033.1| 84|Homo sapiens ribosomal protein S27 ... 165 6e-41
AB061845-1|BAB79483.1| 84|Homo sapiens ribosomal protein S27 p... 165 6e-41
BC003667-1|AAH03667.1| 84|Homo sapiens ribosomal protein S27-l... 160 3e-39
BC047648-1|AAH47648.1| 113|Homo sapiens RPS27L protein protein. 140 3e-33
AB007162-1|BAA25825.1| 69|Homo sapiens ribosomal protein S27 p... 135 8e-32
AL358472-18|CAI14032.1| 66|Homo sapiens ribosomal protein S27 ... 73 5e-13
BC150534-1|AAI50535.1| 127|Homo sapiens Unknown (protein for IM... 29 7.7
AB084276-1|BAC07172.1| 211|Homo sapiens prepro-Neuropeptide W p... 29 7.7
>U57847-1|AAB02266.1| 84|Homo sapiens ribosomal protein S27
protein.
Length = 84
Score = 165 bits (402), Expect = 6e-41
Identities = 72/84 (85%), Positives = 76/84 (90%)
Frame = +3
Query: 66 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 245
MPLA DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 246 TILCQPTGGRARLTEGCSFRRKQH 317
T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61 TVLCQPTGGKARLTEGCSFRRKQH 84
>L19739-1|AAA59867.1| 84|Homo sapiens metallopanstimulin protein.
Length = 84
Score = 165 bits (402), Expect = 6e-41
Identities = 72/84 (85%), Positives = 76/84 (90%)
Frame = +3
Query: 66 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 245
MPLA DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 246 TILCQPTGGRARLTEGCSFRRKQH 317
T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61 TVLCQPTGGKARLTEGCSFRRKQH 84
>BC070219-1|AAH70219.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 165 bits (402), Expect = 6e-41
Identities = 72/84 (85%), Positives = 76/84 (90%)
Frame = +3
Query: 66 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 245
MPLA DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 246 TILCQPTGGRARLTEGCSFRRKQH 317
T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61 TVLCQPTGGKARLTEGCSFRRKQH 84
>BC002658-1|AAH02658.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 165 bits (402), Expect = 6e-41
Identities = 72/84 (85%), Positives = 76/84 (90%)
Frame = +3
Query: 66 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 245
MPLA DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 246 TILCQPTGGRARLTEGCSFRRKQH 317
T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61 TVLCQPTGGKARLTEGCSFRRKQH 84
>AL358472-19|CAI14033.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 165 bits (402), Expect = 6e-41
Identities = 72/84 (85%), Positives = 76/84 (90%)
Frame = +3
Query: 66 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 245
MPLA DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 246 TILCQPTGGRARLTEGCSFRRKQH 317
T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61 TVLCQPTGGKARLTEGCSFRRKQH 84
>AB061845-1|BAB79483.1| 84|Homo sapiens ribosomal protein S27
protein.
Length = 84
Score = 165 bits (402), Expect = 6e-41
Identities = 72/84 (85%), Positives = 76/84 (90%)
Frame = +3
Query: 66 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 245
MPLA DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 246 TILCQPTGGRARLTEGCSFRRKQH 317
T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61 TVLCQPTGGKARLTEGCSFRRKQH 84
>BC003667-1|AAH03667.1| 84|Homo sapiens ribosomal protein S27-like
protein.
Length = 84
Score = 160 bits (388), Expect = 3e-39
Identities = 70/84 (83%), Positives = 75/84 (89%)
Frame = +3
Query: 66 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 245
MPLA DLLHPS E++KHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1 MPLARDLLHPSLEEEKKKHKEKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 246 TILCQPTGGRARLTEGCSFRRKQH 317
T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61 TVLCQPTGGKARLTEGCSFRRKQH 84
>BC047648-1|AAH47648.1| 113|Homo sapiens RPS27L protein protein.
Length = 113
Score = 140 bits (339), Expect = 3e-33
Identities = 62/77 (80%), Positives = 67/77 (87%)
Frame = +3
Query: 72 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 251
LA DLLHPS E++KHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 19 LARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 78
Query: 252 LCQPTGGRARLTEGCSF 302
LCQPTGG+ARLTEG SF
Sbjct: 79 LCQPTGGKARLTEGISF 95
>AB007162-1|BAA25825.1| 69|Homo sapiens ribosomal protein S27
protein.
Length = 69
Score = 135 bits (327), Expect = 8e-32
Identities = 58/69 (84%), Positives = 62/69 (89%)
Frame = +3
Query: 81 DLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQ 260
DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQ
Sbjct: 1 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQ 60
Query: 261 PTGGRARLT 287
PTGG+ARLT
Sbjct: 61 PTGGKARLT 69
>AL358472-18|CAI14032.1| 66|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 66
Score = 73.3 bits (172), Expect = 5e-13
Identities = 32/39 (82%), Positives = 33/39 (84%)
Frame = +3
Query: 66 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPG 182
MPLA DLLHPSP E+RKHK KRLV PNSYFMDVKCPG
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPG 39
>BC150534-1|AAI50535.1| 127|Homo sapiens Unknown (protein for
IMAGE:40127218) protein.
Length = 127
Score = 29.5 bits (63), Expect = 7.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 27 TPFLFRLCIKAVTMPLAIDLLHPSPAS 107
+P+L+R ++A PLA D L P PA+
Sbjct: 20 SPYLWRRALRAAAGPLARDTLSPEPAA 46
>AB084276-1|BAC07172.1| 211|Homo sapiens prepro-Neuropeptide W
polypeptide protein.
Length = 211
Score = 29.5 bits (63), Expect = 7.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 27 TPFLFRLCIKAVTMPLAIDLLHPSPAS 107
+P+L+R ++A PLA D L P PA+
Sbjct: 104 SPYLWRRALRAAAGPLARDTLSPEPAA 130
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,591,021
Number of Sequences: 237096
Number of extensions: 1323984
Number of successful extensions: 3315
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3315
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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