Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_J21
(718 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 113 1e-25
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 113 1e-25
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 109 2e-24
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 102 3e-22
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 101 7e-22
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 99 3e-21
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 93 2e-19
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 90 2e-18
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 89 4e-18
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 88 5e-18
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 88 5e-18
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 87 1e-17
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 87 1e-17
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 87 2e-17
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 85 4e-17
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 85 5e-17
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 80 1e-15
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 80 1e-15
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 78 7e-15
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 75 4e-14
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 74 9e-14
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 74 1e-13
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 74 1e-13
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 74 1e-13
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 72 4e-13
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 72 4e-13
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 71 8e-13
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 71 8e-13
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 70 2e-12
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 70 2e-12
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 70 2e-12
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 70 2e-12
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 70 2e-12
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 70 2e-12
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 70 2e-12
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 68 6e-12
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 66 2e-11
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 64 7e-11
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 64 7e-11
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 64 7e-11
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 64 1e-10
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 63 2e-10
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 60 1e-09
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 59 3e-09
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 59 3e-09
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 45 6e-05
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 45 6e-05
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 39 0.003
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 39 0.003
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 35 0.067
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 32 0.36
U55375-2|AAC69044.2| 285|Caenorhabditis elegans Uncoordinated p... 29 3.3
EF538426-1|ABQ08183.1| 289|Caenorhabditis elegans stomatin-like... 29 3.3
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 29 4.4
Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical pr... 28 7.7
U49944-1|AAA93415.3| 508|Caenorhabditis elegans Long protein 2 ... 28 7.7
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 113 bits (272), Expect = 1e-25
Identities = 64/183 (34%), Positives = 107/183 (58%)
Frame = +1
Query: 169 KLN*KMTDEKKVMFHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGS 348
++N +K + ++ LD + KAI + G+ +PT IQ IP +++GKDV+ +RTGS
Sbjct: 13 QINQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGS 72
Query: 349 GKTAAFAVPVIQKILNLKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCID 528
GKTAAF +P++QK+ T IRAL++SP++EL Q V+ +L +RC
Sbjct: 73 GKTAAFVIPMLQKLKRRDTT----GIRALMVSPTRELALQTFKVVKELGRFTG--LRCAC 126
Query: 529 ISANGDTQTQKAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEADLIFSXGYE 708
+ + Q + + + PDI++ATP R L + ++RL + +V DEAD +F G++
Sbjct: 127 LVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSY-VQYVVFDEADRLFEMGFQ 185
Query: 709 DEI 717
D++
Sbjct: 186 DQL 188
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 113 bits (272), Expect = 1e-25
Identities = 64/183 (34%), Positives = 107/183 (58%)
Frame = +1
Query: 169 KLN*KMTDEKKVMFHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGS 348
++N +K + ++ LD + KAI + G+ +PT IQ IP +++GKDV+ +RTGS
Sbjct: 13 QINQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGS 72
Query: 349 GKTAAFAVPVIQKILNLKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCID 528
GKTAAF +P++QK+ T IRAL++SP++EL Q V+ +L +RC
Sbjct: 73 GKTAAFVIPMLQKLKRRDTT----GIRALMVSPTRELALQTFKVVKELGRFTG--LRCAC 126
Query: 529 ISANGDTQTQKAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEADLIFSXGYE 708
+ + Q + + + PDI++ATP R L + ++RL + +V DEAD +F G++
Sbjct: 127 LVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSY-VQYVVFDEADRLFEMGFQ 185
Query: 709 DEI 717
D++
Sbjct: 186 DQL 188
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 109 bits (262), Expect = 2e-24
Identities = 63/171 (36%), Positives = 103/171 (60%), Gaps = 1/171 (0%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
F + LD+RILK+I +LGW + +QE+ I L LE K+++ RARTGSGKT AF +P++QK
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 388 IL-NLKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQKA 564
++ K A+I++P+KEL QI + L+ + ++ I++ + + +
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKLS-QALPFLQAINL-CDINEEENSV 208
Query: 565 ILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEADLIFSXGYEDEI 717
L D+ +VV TP + L+ + + +S LV+DEADL+ S GYE+E+
Sbjct: 209 WLEDRSHVVVTTPGK-LLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEM 258
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 102 bits (244), Expect = 3e-22
Identities = 63/176 (35%), Positives = 95/176 (53%)
Frame = +1
Query: 190 DEKKVMFHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFA 369
D K+ F E+ + + A +LGW +P+ IQ+ A+P L+GKDV+ A TGSGKT AFA
Sbjct: 40 DVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFA 99
Query: 370 VPVIQKILNLKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDT 549
+PV+Q +L+ Q+ L+L+P++EL QI L + I D
Sbjct: 100 IPVLQSLLD-----HPQAFFCLVLTPTRELAFQIGQQFEALGSGIG--LIAAVIVGGVDM 152
Query: 550 QTQKAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEADLIFSXGYEDEI 717
Q L+ +P I+VATP R + HL+ + L L++DEAD I + +E E+
Sbjct: 153 AAQAMALARRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVEL 208
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 101 bits (241), Expect = 7e-22
Identities = 62/168 (36%), Positives = 94/168 (55%)
Frame = +1
Query: 214 EMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQKIL 393
E +++ +LKA+ LG+ T IQ +I LLEGKDVL A+TGSGKT AF +P I+ +L
Sbjct: 72 EGKVNANLLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIE-LL 130
Query: 394 NLKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQKAILS 573
+ N +H +I+SP++EL Q V+ +L + +N + K L+
Sbjct: 131 HKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDK--LA 188
Query: 574 DKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEADLIFSXGYEDEI 717
I+VATP R L HL+ + L ++ L++DEAD I G+E E+
Sbjct: 189 KGVSILVATPGRLLDHLQNTDNFLVRNMKCLIIDEADRILDIGFEIEM 236
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 99.1 bits (236), Expect = 3e-21
Identities = 56/141 (39%), Positives = 83/141 (58%)
Frame = +1
Query: 202 VMFHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVI 381
V F +M L +ILKA S G+ +PT IQ+ IP+ L GKD+ A TG+GKTAAF +P++
Sbjct: 148 VSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPIL 207
Query: 382 QKILNLKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQK 561
++++ + R L+L P++EL Q+ V L+ EV C+ + D + Q+
Sbjct: 208 ERMIYRPKGA--SCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEV-CL-CAGGLDLKAQE 263
Query: 562 AILSDKPDIVVATPSRALVHL 624
A L PD+VVATP R + HL
Sbjct: 264 AALRSGPDVVVATPGRLIDHL 284
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 93.1 bits (221), Expect = 2e-19
Identities = 63/176 (35%), Positives = 94/176 (53%), Gaps = 11/176 (6%)
Frame = +1
Query: 223 LDDRILKAISQLGWPEPTLIQETAIPLLLEGK-DVLMRARTGSGKTAAFAVPVIQKILNL 399
L + +L+AI Q+G+ EPT IQ +P + + DVL A TGSGKT AF +P++ ++L
Sbjct: 162 LPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLES 221
Query: 400 KNTSKH------QSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQK 561
+ S+ + RALI++P++EL QI I L I + + + + ++
Sbjct: 222 SDDSQETESTEVRGPRALIVAPTRELVIQIMKHINAL-ISTTQLIATSIVGGLAQVKQER 280
Query: 562 AILSDKPDIVVATPSR--ALVHLKANNMRLKE--DLSMLVVDEADLIFSXGYEDEI 717
I +PDIVVATP R A++ L E DL LVVDE D + GY E+
Sbjct: 281 IISQQRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAEL 336
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 89.8 bits (213), Expect = 2e-18
Identities = 54/175 (30%), Positives = 97/175 (55%)
Frame = +1
Query: 184 MTDEKKVMFHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAA 363
+TD K V F + L +L I + GW +P+ IQE +I + L G+D+L RA+ G+GKT A
Sbjct: 37 VTDTKGVEFEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGA 96
Query: 364 FAVPVIQKILNLKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANG 543
+ +PVI+KI ++I+A+++ P++EL Q + + +L+ +++ + +
Sbjct: 97 YCIPVIEKI-----QPALKAIQAMVIVPTRELALQTSQICVELSKHI--QLKVMVTTGGT 149
Query: 544 DTQTQKAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEADLIFSXGYE 708
D + L+ +V+ATP R ++ L + E LV+DEAD + S ++
Sbjct: 150 DLRDDIMRLNGTVHLVIATPGR-ILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQ 203
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 88.6 bits (210), Expect = 4e-18
Identities = 52/170 (30%), Positives = 97/170 (57%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
F +M L + +L+ I G+ +P+ IQ+ AIP +L+ +DV+ +A++G+GKTA F++ V+Q
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 388 ILNLKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQKAI 567
+ ++ + +ALILSP++EL QI V+ L + V+C +
Sbjct: 88 L-----DTQVRETQALILSPTRELAVQIQKVV--LALGDYMNVQCHACIGGTNLGEDIRK 140
Query: 568 LSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEADLIFSXGYEDEI 717
L +V TP R ++ N+R + + +LV+DEAD + + G+++++
Sbjct: 141 LDYGQHVVSGTPGRVFDMIRRRNLRTRA-IKLLVLDEADEMLNKGFKEQL 189
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 88.2 bits (209), Expect = 5e-18
Identities = 55/177 (31%), Positives = 97/177 (54%), Gaps = 7/177 (3%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
+ E D + +A+ ++G+ EPT IQ AIP+ L+ +DV+ A TGSGKTAAF +P++
Sbjct: 303 WEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVW 362
Query: 388 ILNLKNTSK--HQSI--RALILSPSKELCGQI---TSVIGDLTIKCAREVRCIDISANGD 546
I +L + H+ + A+I++P++EL QI T+ G L ++ + +
Sbjct: 363 ITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLL-----GIKTVSVIGGAS 417
Query: 547 TQTQKAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEADLIFSXGYEDEI 717
+ Q L ++V+ATP R L+ + N L + +++DEAD + G+E ++
Sbjct: 418 REDQGMKLRMGVEVVIATPGR-LLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDV 473
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 88.2 bits (209), Expect = 5e-18
Identities = 51/170 (30%), Positives = 97/170 (57%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
F +M L + +L+ I G+ +P+ IQ+ A+P +L+ +DV+ +A++G+GKTA F++ V+Q
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 388 ILNLKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQKAI 567
+ ++ + +ALILSP++EL QI V+ L + V+C +
Sbjct: 88 L-----DTQVRETQALILSPTRELAVQIQKVV--LALGDYMNVQCHACIGGTNLGEDIRK 140
Query: 568 LSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEADLIFSXGYEDEI 717
L +V TP R ++ N+R + + +LV+DEAD + + G+++++
Sbjct: 141 LDYGQHVVSGTPGRVFDMIRRRNLRTRA-IKLLVLDEADEMLNKGFKEQL 189
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 87.0 bits (206), Expect = 1e-17
Identities = 58/177 (32%), Positives = 98/177 (55%), Gaps = 1/177 (0%)
Frame = +1
Query: 190 DEKKVMFHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFA 369
D+ F +MEL + +L+ I G+ +P+ IQ+ AI GKDV+ +A++G+GKTA F+
Sbjct: 25 DQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFS 84
Query: 370 VPVIQKILNLKNTSKHQSIRALILSPSKELCGQITSVIGDL-TIKCAREVRCIDISANGD 546
V ++Q+I + H ++AL+++P++EL QI V+ L + CI ++ D
Sbjct: 85 VSILQRI---DHEDPH--VQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRD 139
Query: 547 TQTQKAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEADLIFSXGYEDEI 717
Q + L +VV TP R + N + + M V+DEAD + S G++D+I
Sbjct: 140 DQRK---LEAGIHVVVGTPGRVGDMINRNALDTSR-IKMFVLDEADEMLSRGFKDQI 192
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 87.0 bits (206), Expect = 1e-17
Identities = 58/177 (32%), Positives = 98/177 (55%), Gaps = 1/177 (0%)
Frame = +1
Query: 190 DEKKVMFHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFA 369
D+ F +MEL + +L+ I G+ +P+ IQ+ AI GKDV+ +A++G+GKTA F+
Sbjct: 25 DQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFS 84
Query: 370 VPVIQKILNLKNTSKHQSIRALILSPSKELCGQITSVIGDL-TIKCAREVRCIDISANGD 546
V ++Q+I + H ++AL+++P++EL QI V+ L + CI ++ D
Sbjct: 85 VSILQRI---DHEDPH--VQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRD 139
Query: 547 TQTQKAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEADLIFSXGYEDEI 717
Q + L +VV TP R + N + + M V+DEAD + S G++D+I
Sbjct: 140 DQRK---LEAGIHVVVGTPGRVGDMINRNALDTSR-IKMFVLDEADEMLSRGFKDQI 192
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 86.6 bits (205), Expect = 2e-17
Identities = 51/150 (34%), Positives = 80/150 (53%)
Frame = +1
Query: 268 EPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQKILNLKNTSKHQSIRALILSP 447
+PT+IQ + P+ + G+D++ A+TGSGKT AF +P + I + + + L+L P
Sbjct: 151 KPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLP 210
Query: 448 SKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQKAILSDKPDIVVATPSRALVHLK 627
++EL Q+ V D ++ C+ A+ Q + L DIVVATP R L L
Sbjct: 211 TRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARD--LERGVDIVVATPGRLLDFLD 268
Query: 628 ANNMRLKEDLSMLVVDEADLIFSXGYEDEI 717
+K+ S LV+DEAD + G+E +I
Sbjct: 269 NGTTNMKK-CSYLVLDEADRMLDMGFEPQI 297
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 85.4 bits (202), Expect = 4e-17
Identities = 55/179 (30%), Positives = 87/179 (48%)
Frame = +1
Query: 181 KMTDEKKVMFHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTA 360
K + + F + L R L+ + + +PT IQ I L G DV+ A+TGSGKT
Sbjct: 69 KKSSRTFLRFEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTL 128
Query: 361 AFAVPVIQKILNLKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISAN 540
A +PV++ + K S + ALI+SP++EL Q S I + C +
Sbjct: 129 ALVIPVLEALWRAK-WSPDYGLGALIISPTRELALQTFSTIN--AVGAHHGFSCGLVIGG 185
Query: 541 GDTQTQKAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEADLIFSXGYEDEI 717
D ++ +S +I+V TP R L H+ N + L +LV+DEAD + G+ ++
Sbjct: 186 SDVAFERNRISG-INIIVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQL 243
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 85.0 bits (201), Expect = 5e-17
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 2/164 (1%)
Frame = +1
Query: 232 RILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQKILNLKNTS 411
+++ + + + +PT IQ AIP ++ G+DV+ A+TGSGKT AF +P+ + IL+
Sbjct: 314 KMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELE 373
Query: 412 KHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQKAILSDKPDIV 591
+ A+IL+P++EL Q +V C G ++ Q A L +IV
Sbjct: 374 EGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVAC-TYGGVGISE-QIADLKRGAEIV 431
Query: 592 VATPSRALVHLKANNMRLK--EDLSMLVVDEADLIFSXGYEDEI 717
V TP R + L AN+ ++ ++ LV+DEAD +F G+E +I
Sbjct: 432 VCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQI 475
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 80.2 bits (189), Expect = 1e-15
Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 3/151 (1%)
Frame = +1
Query: 274 TLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQKILNLKNTSKHQSIRALILSPSK 453
T +Q IP +LEG D+L ARTG+GKT AFA+P++QK+ + I ALIL+P++
Sbjct: 113 TPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKL-----SVDPYGIYALILTPTR 167
Query: 454 ELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQKAILSDKPDIVVATPSRA--LVHLK 627
EL QI L ++C I Q LS++P +VVATP R L+
Sbjct: 168 ELAFQIAEQFTALGKPIT--LKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESD 225
Query: 628 ANNM-RLKEDLSMLVVDEADLIFSXGYEDEI 717
+ + ++ + + V+DEAD + Y D++
Sbjct: 226 PDTIAKVFKKIQFFVLDEADRMLEGQYNDQL 256
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 80.2 bits (189), Expect = 1e-15
Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 3/151 (1%)
Frame = +1
Query: 274 TLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQKILNLKNTSKHQSIRALILSPSK 453
T +Q IP +LEG D+L ARTG+GKT AFA+P++QK+ + I ALIL+P++
Sbjct: 113 TPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKL-----SVDPYGIYALILTPTR 167
Query: 454 ELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQKAILSDKPDIVVATPSRA--LVHLK 627
EL QI L ++C I Q LS++P +VVATP R L+
Sbjct: 168 ELAFQIAEQFTALGKPIT--LKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESD 225
Query: 628 ANNM-RLKEDLSMLVVDEADLIFSXGYEDEI 717
+ + ++ + + V+DEAD + Y D++
Sbjct: 226 PDTIAKVFKKIQFFVLDEADRMLEGQYNDQL 256
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 79.8 bits (188), Expect = 2e-15
Identities = 57/161 (35%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Frame = +1
Query: 268 EPTLIQETAIPLLLEGK-DVLMRARTGSGKTAAFAVPVIQKILNLKNTSKH------QSI 426
EPT IQ +P + + DVL A TGSGKT AF +P++ ++L + S+ +
Sbjct: 10 EPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGP 69
Query: 427 RALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQKAILSDKPDIVVATPS 606
RALI++P++EL QI I L I + + + + ++ I +PDIVVATP
Sbjct: 70 RALIVAPTRELVIQIMKHINAL-ISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATPG 128
Query: 607 R--ALVHLKANNMRLKE--DLSMLVVDEADLIFSXGYEDEI 717
R A++ L E DL LVVDE D + GY E+
Sbjct: 129 RLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAEL 169
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 77.8 bits (183), Expect = 7e-15
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 5/167 (2%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
F + + +L +S+ +P+ IQ +IP + E ++VL A TGSGKT AFA+PVI +
Sbjct: 128 FSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDE 187
Query: 388 ILNLK-----NTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQ 552
IL LK ++S + A++L P++EL Q + + CA + +T
Sbjct: 188 ILELKQRADYSSSNSSKLLAVVLEPTRELAAQTYT---EFLKYCANTSISAANFSGEETD 244
Query: 553 TQKAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEADLIF 693
Q A DI+V+TP+R + HL + L LVVDE+D +F
Sbjct: 245 IQHA------DILVSTPNRIVFHLDKID---TSSLRWLVVDESDRLF 282
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 77.0 bits (181), Expect = 1e-14
Identities = 54/141 (38%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Frame = +1
Query: 304 LLEGKDVLMRARTGSGKTAAFAVPVIQKILNLKNTSKHQSIRALILSPSKELCGQITSVI 483
LL DV++ + TGSGKT AF +P+++ I N K + I ALILSPS+ELC QI SVI
Sbjct: 43 LLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAK--LQPADIGALILSPSRELCSQIVSVI 100
Query: 484 GDLTIKCAREVRCIDISANGDTQTQKAILSDKPDIVVATPSR---ALVHLKANNMRLKED 654
K V + D + K + +I+VATP R + H K R
Sbjct: 101 QPFAEKLNLTVETVTGGQKVD-KNIKMFKNKNVNILVATPGRLFQIIQHEKTLIARKMRT 159
Query: 655 LSMLVVDEADLIFSXGYEDEI 717
L +LV+DEAD +ED +
Sbjct: 160 LQLLVIDEADRFNEIQFEDHM 180
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 75.4 bits (177), Expect = 4e-14
Identities = 59/174 (33%), Positives = 89/174 (51%), Gaps = 4/174 (2%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
F D +++AI + + +PT IQ AIP L G+DVL A+TGSGKTAA+ P I
Sbjct: 267 FAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVH 326
Query: 388 ILNLKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKC-AREVRCIDISANGDTQTQKA 564
I++ + + A+I+ P++EL Q V + C + I G Q
Sbjct: 327 IMDQPDLKAGEGPVAVIVVPTRELAIQ---VFQEAKKFCKVYNINPICAYGGGSKWEQSN 383
Query: 565 ILSDK-PDIVVATPSRA--LVHLKANNMRLKEDLSMLVVDEADLIFSXGYEDEI 717
L ++ ++VV TP R LV + A N L+ + LV DEAD +F G+E ++
Sbjct: 384 ELQNEGAEMVVCTPGRIIDLVKMGATNF-LR--TTFLVFDEADRMFDMGFEAQV 434
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 74.1 bits (174), Expect = 9e-14
Identities = 58/183 (31%), Positives = 90/183 (49%), Gaps = 12/183 (6%)
Frame = +1
Query: 205 MFHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQ 384
+F ++ L + I + I G+ PT +Q+ +IP L G+D++ A+TGSGKTAAF VP++
Sbjct: 167 LFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVN 226
Query: 385 KILNLKNTSKHQSI-----------RALILSPSKELCGQITSVIGDLTIKC-AREVRCID 528
IL + H+S+ AL+LSP++EL QI + +
Sbjct: 227 AILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTPITSALLYG 286
Query: 529 ISANGDTQTQKAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEADLIFSXGYE 708
N Q K L I++ATP R L+ + + E LV+DEAD + G+E
Sbjct: 287 GRENYKDQIHKLRLG--CHILIATPGR-LIDVMDQGLIGMEGCRYLVLDEADRMLDMGFE 343
Query: 709 DEI 717
+I
Sbjct: 344 PQI 346
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 73.7 bits (173), Expect = 1e-13
Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
F+E +++ +++ G+ +PT +Q+ +IP LL +D++ A+TGSGKTAAF +P+IQ
Sbjct: 141 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 200
Query: 388 ILN----------LKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISA 537
IL N + AL+LSP++EL QI + K + +
Sbjct: 201 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAIL-YGG 259
Query: 538 NGDTQTQKAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEADLIFSXGYEDEI 717
+ + Q L I++ATP R + ++ + L LV+DEAD + G+E +I
Sbjct: 260 RENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLA-GCRYLVLDEADRMLDMGFEPQI 318
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 73.7 bits (173), Expect = 1e-13
Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
F+E +++ +++ G+ +PT +Q+ +IP LL +D++ A+TGSGKTAAF +P+IQ
Sbjct: 125 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 184
Query: 388 ILN----------LKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISA 537
IL N + AL+LSP++EL QI + K + +
Sbjct: 185 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAIL-YGG 243
Query: 538 NGDTQTQKAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEADLIFSXGYEDEI 717
+ + Q L I++ATP R + ++ + L LV+DEAD + G+E +I
Sbjct: 244 RENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLA-GCRYLVLDEADRMLDMGFEPQI 302
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 73.7 bits (173), Expect = 1e-13
Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
F+E +++ +++ G+ +PT +Q+ +IP LL +D++ A+TGSGKTAAF +P+IQ
Sbjct: 122 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 181
Query: 388 ILN----------LKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISA 537
IL N + AL+LSP++EL QI + K + +
Sbjct: 182 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAIL-YGG 240
Query: 538 NGDTQTQKAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEADLIFSXGYEDEI 717
+ + Q L I++ATP R + ++ + L LV+DEAD + G+E +I
Sbjct: 241 RENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLA-GCRYLVLDEADRMLDMGFEPQI 299
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 72.1 bits (169), Expect = 4e-13
Identities = 49/172 (28%), Positives = 89/172 (51%), Gaps = 2/172 (1%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
F + + + L+ + + P+ +Q AIP+ L G+D+L++A++G+GKT F+V ++
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE- 82
Query: 388 ILNLKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQKAI 567
NL + S H I+ +I++P++E+ QI + + AR + + + +
Sbjct: 83 --NLDSRSSH--IQKVIVTPTREISVQIKETVRKVAPTGAR--TSVYVGGSAHKLNLIDL 136
Query: 568 LSDKPDIVVATPSR--ALVHLKANNMRLKEDLSMLVVDEADLIFSXGYEDEI 717
+P IV+ TP R LV L A NM + V+DEAD + + D+I
Sbjct: 137 KQTRPQIVIGTPGRIAQLVKLGAMNM---SHVDFFVLDEADKLMDEVFRDDI 185
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 72.1 bits (169), Expect = 4e-13
Identities = 49/172 (28%), Positives = 89/172 (51%), Gaps = 2/172 (1%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
F + + + L+ + + P+ +Q AIP+ L G+D+L++A++G+GKT F+V ++
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE- 82
Query: 388 ILNLKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQKAI 567
NL + S H I+ +I++P++E+ QI + + AR + + + +
Sbjct: 83 --NLDSRSSH--IQKVIVTPTREISVQIKETVRKVAPTGAR--TSVYVGGSAHKLNLIDL 136
Query: 568 LSDKPDIVVATPSR--ALVHLKANNMRLKEDLSMLVVDEADLIFSXGYEDEI 717
+P IV+ TP R LV L A NM + V+DEAD + + D+I
Sbjct: 137 KQTRPQIVIGTPGRIAQLVKLGAMNM---SHVDFFVLDEADKLMDEVFRDDI 185
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 70.9 bits (166), Expect = 8e-13
Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 5/175 (2%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
F + ++ + + + + G+ T IQ+ +PL+ +GKD+L A+TGSGKTAAF +P++ +
Sbjct: 300 FSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSR 359
Query: 388 ILNLKNTSKHQS----IRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQT 555
++ K+ + R +IL+P++EL QI + + + E++ + N
Sbjct: 360 LILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGIN--VGY 417
Query: 556 QKAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEAD-LIFSXGYEDEI 717
K+ + I+V T R + ++L + LV+DEAD +I S G+ EI
Sbjct: 418 NKSQIMKGCTIIVGTIGRVKHFCEDGAIKL-DKCRYLVLDEADRMIDSMGFGPEI 471
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 70.9 bits (166), Expect = 8e-13
Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 5/175 (2%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
F + ++ + + + + G+ T IQ+ +PL+ +GKD+L A+TGSGKTAAF +P++ +
Sbjct: 300 FSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSR 359
Query: 388 ILNLKNTSKHQS----IRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQT 555
++ K+ + R +IL+P++EL QI + + + E++ + N
Sbjct: 360 LILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGIN--VGY 417
Query: 556 QKAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEAD-LIFSXGYEDEI 717
K+ + I+V T R + ++L + LV+DEAD +I S G+ EI
Sbjct: 418 NKSQIMKGCTIIVGTIGRVKHFCEDGAIKL-DKCRYLVLDEADRMIDSMGFGPEI 471
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 69.7 bits (163), Expect = 2e-12
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 5/175 (2%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
F E L + + K ++ G+ + T IQ+ A+PL+ +G D++ A+TGSGKTAAF +P++ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 388 IL--NLKNTSKHQSI--RALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQT 555
++ N NT+ R +IL+P++EL QI + + E++ +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIK--PVYGGLAVGY 460
Query: 556 QKAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEAD-LIFSXGYEDEI 717
K + I+V T R + ++L + V+DEAD +I + G+ +I
Sbjct: 461 NKGQIEKGATIIVGTVGRIKHFCEEGTIKL-DKCRFFVLDEADRMIDAMGFGTDI 514
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 69.7 bits (163), Expect = 2e-12
Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 5/175 (2%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
F E L + + K ++ G+ + T IQ+ +PL+ +G D++ A+TGSGKTAAF +P++ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 388 IL--NLKNTSKHQSI--RALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQT 555
++ N NT+ R +IL+P++EL QI + + E+R +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIR--PVYGGLAVGY 671
Query: 556 QKAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEAD-LIFSXGYEDEI 717
K + I+V T R + ++L + V+DEAD +I + G+ +I
Sbjct: 672 NKGQIEKGATIIVGTVGRIKHFCEEGTIKL-DKCRFFVLDEADRMIDAMGFGTDI 725
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 69.7 bits (163), Expect = 2e-12
Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 5/175 (2%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
F E L + + K ++ G+ + T IQ+ +PL+ +G D++ A+TGSGKTAAF +P++ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 388 IL--NLKNTSKHQSI--RALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQT 555
++ N NT+ R +IL+P++EL QI + + E+R +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIR--PVYGGLAVGY 671
Query: 556 QKAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEAD-LIFSXGYEDEI 717
K + I+V T R + ++L + V+DEAD +I + G+ +I
Sbjct: 672 NKGQIEKGATIIVGTVGRIKHFCEEGTIKL-DKCRFFVLDEADRMIDAMGFGTDI 725
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 69.7 bits (163), Expect = 2e-12
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 5/175 (2%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
F E L + + K ++ G+ + T IQ+ A+PL+ +G D++ A+TGSGKTAAF +P++ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 388 IL--NLKNTSKHQSI--RALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQT 555
++ N NT+ R +IL+P++EL QI + + E++ +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIK--PVYGGLAVGY 460
Query: 556 QKAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEAD-LIFSXGYEDEI 717
K + I+V T R + ++L + V+DEAD +I + G+ +I
Sbjct: 461 NKGQIEKGATIIVGTVGRIKHFCEEGTIKL-DKCRFFVLDEADRMIDAMGFGTDI 514
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 69.7 bits (163), Expect = 2e-12
Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 5/175 (2%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
F E L + + K ++ G+ + T IQ+ A+PL+ +G D++ A+TGSGKTAAF +P++ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 388 IL--NLKNTSKHQSI--RALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQT 555
++ N NT+ R +IL+P++EL QI + + E++ +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIK--PVYGGLAVGY 460
Query: 556 QKAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEAD-LIFSXGYEDEI 717
K + I+V T R + ++L + V+DEAD +I + G+ +I
Sbjct: 461 NKGQIEKGATIIVGTVGRIKHFCEEGTIKL-DKCRFFVLDEADRMIDAMGFGTDI 514
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 69.7 bits (163), Expect = 2e-12
Identities = 59/178 (33%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Frame = +1
Query: 208 FHEMELDDRILKAIS-QLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQ 384
F EM+ +L+ + Q G PT IQ IP+ L G+D++ A TGSGKT F +P++
Sbjct: 191 FLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVM 250
Query: 385 KILNLKNT---SKHQSIRALILSPSKELCGQITSVIGDLTIKCAR----EVRCIDISANG 543
L + + + LI+ PS+EL QI +I ++ + E+R
Sbjct: 251 FCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGV 310
Query: 544 DTQTQKAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEADLIFSXGYEDEI 717
Q + D IVVATP R L + L E LV+DEAD + G+EDEI
Sbjct: 311 PIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINL-EVCRYLVLDEADRMLDMGFEDEI 367
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 69.7 bits (163), Expect = 2e-12
Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 5/175 (2%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
F E L + + K ++ G+ + T IQ+ +PL+ +G D++ A+TGSGKTAAF +P++ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 388 IL--NLKNTSKHQSI--RALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQT 555
++ N NT+ R +IL+P++EL QI + + E+R +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIR--PVYGGLAVGY 671
Query: 556 QKAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEAD-LIFSXGYEDEI 717
K + I+V T R + ++L + V+DEAD +I + G+ +I
Sbjct: 672 NKGQIEKGATIIVGTVGRIKHFCEEGTIKL-DKCRFFVLDEADRMIDAMGFGTDI 725
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 68.1 bits (159), Expect = 6e-12
Identities = 51/172 (29%), Positives = 90/172 (52%), Gaps = 7/172 (4%)
Frame = +1
Query: 223 LDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQKILNLK 402
L IL+ + ++ + IQ IP +L+G DVL +A T +GKTAAF +P+I KIL +
Sbjct: 388 LHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMD 447
Query: 403 NTSKHQSIR-----ALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQKAI 567
+++++ + ALIL+P++EL QI L C + I + + G + +++
Sbjct: 448 EETRNKARQDDGPLALILAPTRELAAQIHEA---LRTYC-QNTDIIVLLSYGQSDRARSL 503
Query: 568 --LSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEADLIFSXGYEDEI 717
+ + DI++ T R + +++ L L LV DEAD + +D +
Sbjct: 504 NEIRNGCDILIGTCGRIMDFTVKSHISLLH-LRFLVFDEADRLLQDMKKDPL 554
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 66.5 bits (155), Expect = 2e-11
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 6/164 (3%)
Frame = +1
Query: 235 ILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQKI-LNLKNTS 411
I+ I + G+ +P+ IQ PLLL G+D + ++TGSGKT AF +P + I L
Sbjct: 95 IMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYE 154
Query: 412 KHQ-----SIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQKAILSD 576
K+ S L+LSP++EL QI G++ + + + G Q
Sbjct: 155 KNDEEQKPSPFVLVLSPTRELAQQIE---GEVKKYSYNGYKSVCLYGGGSRPEQVEACRG 211
Query: 577 KPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEADLIFSXGYE 708
+IV+ATP R L L + + ++ +V+DEAD + G+E
Sbjct: 212 GVEIVIATPGR-LTDLSNDGVISLASVTYVVLDEADRMLDMGFE 254
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 64.5 bits (150), Expect = 7e-11
Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 4/172 (2%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLL--EGKDVLMRARTGSGKTAAFAVPVI 381
F E+ L +LKA+ + + PT IQETA+PLLL +++ +A++G+GKTAAF + ++
Sbjct: 211 FRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTML 270
Query: 382 QKI-LNLKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQ 558
+I +NL + + L+P+ EL QI V+ + K ++ I + G
Sbjct: 271 CRIDVNL------MCPQCICLAPTLELAKQIGEVVEKMG-KFIDNLK-IHYAIKGGNMAA 322
Query: 559 KAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEAD-LIFSXGYED 711
IV+ TP +L+ + LV+DEAD +I+ G+ D
Sbjct: 323 MRGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTD 374
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 64.5 bits (150), Expect = 7e-11
Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 4/172 (2%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLL--EGKDVLMRARTGSGKTAAFAVPVI 381
F E+ L +LKA+ + + PT IQETA+PLLL +++ +A++G+GKTAAF + ++
Sbjct: 236 FRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTML 295
Query: 382 QKI-LNLKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQ 558
+I +NL + + L+P+ EL QI V+ + K ++ I + G
Sbjct: 296 CRIDVNL------MCPQCICLAPTLELAKQIGEVVEKMG-KFIDNLK-IHYAIKGGNMAA 347
Query: 559 KAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEAD-LIFSXGYED 711
IV+ TP +L+ + LV+DEAD +I+ G+ D
Sbjct: 348 MRGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTD 399
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 64.5 bits (150), Expect = 7e-11
Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 4/172 (2%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLL--EGKDVLMRARTGSGKTAAFAVPVI 381
F E+ L +LKA+ + + PT IQETA+PLLL +++ +A++G+GKTAAF + ++
Sbjct: 620 FRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTML 679
Query: 382 QKI-LNLKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQ 558
+I +NL + + L+P+ EL QI V+ + K ++ I + G
Sbjct: 680 CRIDVNL------MCPQCICLAPTLELAKQIGEVVEKMG-KFIDNLK-IHYAIKGGNMAA 731
Query: 559 KAILSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEAD-LIFSXGYED 711
IV+ TP +L+ + LV+DEAD +I+ G+ D
Sbjct: 732 MRGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTD 783
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 64.1 bits (149), Expect = 1e-10
Identities = 43/167 (25%), Positives = 85/167 (50%)
Frame = +1
Query: 217 MELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQKILN 396
MEL + +L+ I G+ +P+ IQ++A+ GKDV ++++ GSGKT + ++Q I
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGI-- 58
Query: 397 LKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQKAILSD 576
+ ++ ++L+P + + + + L C+ DT + +S
Sbjct: 59 ---DCEDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNATCLGF----DTTAENDKIS- 110
Query: 577 KPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEADLIFSXGYEDEI 717
+++ TP L ++ ++ R+K M V+DEAD + S G++D+I
Sbjct: 111 --HVLMGTPKDFLSNIPSDTSRIK----MFVLDEADEMLSKGFKDQI 151
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 63.3 bits (147), Expect = 2e-10
Identities = 40/159 (25%), Positives = 75/159 (47%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
F + L IL+AI G+ P+ +Q IP + G DV+ +A++G GKTA F + +Q+
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 388 ILNLKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQKAI 567
+ + + + + ++EL QI+ + + + ++ +
Sbjct: 103 LEPVDG-----EVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERL 157
Query: 568 LSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEAD 684
+D P IVV TP R L ++ ++L + + V+DE D
Sbjct: 158 ANDCPHIVVGTPGRMLALARSGKLKL-DKVKYFVLDECD 195
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 63.3 bits (147), Expect = 2e-10
Identities = 40/159 (25%), Positives = 75/159 (47%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
F + L IL+AI G+ P+ +Q IP + G DV+ +A++G GKTA F + +Q+
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 388 ILNLKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQKAI 567
+ + + + + ++EL QI+ + + + ++ +
Sbjct: 103 LEPVDG-----EVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERL 157
Query: 568 LSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEAD 684
+D P IVV TP R L ++ ++L + + V+DE D
Sbjct: 158 ANDCPHIVVGTPGRMLALARSGKLKL-DKVKYFVLDECD 195
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 63.3 bits (147), Expect = 2e-10
Identities = 40/159 (25%), Positives = 75/159 (47%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
F + L IL+AI G+ P+ +Q IP + G DV+ +A++G GKTA F + +Q+
Sbjct: 42 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 101
Query: 388 ILNLKNTSKHQSIRALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQKAI 567
+ + + + + ++EL QI+ + + + ++ +
Sbjct: 102 LEPVDG-----EVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERL 156
Query: 568 LSDKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEAD 684
+D P IVV TP R L ++ ++L + + V+DE D
Sbjct: 157 ANDCPHIVVGTPGRMLALARSGKLKL-DKVKYFVLDECD 194
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 60.5 bits (140), Expect = 1e-09
Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 4/142 (2%)
Frame = +1
Query: 271 PTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQKILNLKNTSKHQSIRALILSPS 450
P+L E P L +DV + A TGSGKT + +PV+ + + + ++A+IL P
Sbjct: 142 PSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAV----GSKPSKILQAVILVPV 197
Query: 451 KELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQ-KAILSDKPDIVVATPSRALVHLK 627
+ L QI + + + + +S D + + + + SD P+++VATP+R + HL
Sbjct: 198 QTLVAQIVDEFKRWNDE-SGVAKVVSLSGANDFEKEARQLASDPPNVIVATPARLVQHL- 255
Query: 628 ANNMRLKEDLS---MLVVDEAD 684
+ + DLS L+VDEAD
Sbjct: 256 TSKIPPPIDLSKLRFLIVDEAD 277
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = +1
Query: 208 FHEMELDDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQK 387
F E + + A+S L W PT +Q AIP +L G D L+ A TGSGKT AF++P+ Q
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQI 63
Query: 388 ILNLKNTSK 414
+ + +++
Sbjct: 64 VWERRKSAE 72
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +1
Query: 433 LILSPSKELCGQITSVIGDL-TIKCAREVRCIDISANGDTQTQKAILSDKPDIVVATPSR 609
+IL P++EL Q I ++ + ++RC+ ++A + L DIVV TPSR
Sbjct: 285 VILEPTRELVQQTFQNIQTFASVLDSPKIRCVTLAAGENMNQILRTLETGCDIVVGTPSR 344
Query: 610 ALVHLKANNMRLKEDLSMLVVDEAD 684
+ + K +L +V+DE D
Sbjct: 345 VFDLIHTGKLATK-NLQFVVIDEID 368
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 59.3 bits (137), Expect = 3e-09
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Frame = +1
Query: 271 PTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQKIL-----NLKNTSKHQSIRAL 435
PT IQ + ++ G DV+ A TGSGKT AF +P + K++ + T + S R L
Sbjct: 759 PTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLL 818
Query: 436 ILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQKAILSDKPDIVVATPSRAL 615
I++P++EL Q + LT + + + + Q + +I+VAT R
Sbjct: 819 IVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQ 878
Query: 616 VHLKANNMRLKEDLSMLVVDEAD-LIFSXGYEDEI 717
+ A + L + + +V+DEAD ++ S + +E+
Sbjct: 879 DFVNAGEVSLSK-MKYIVLDEADRMVDSNDFGEEV 912
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 59.3 bits (137), Expect = 3e-09
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Frame = +1
Query: 271 PTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQKIL-----NLKNTSKHQSIRAL 435
PT IQ + ++ G DV+ A TGSGKT AF +P + K++ + T + S R L
Sbjct: 759 PTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLL 818
Query: 436 ILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQKAILSDKPDIVVATPSRAL 615
I++P++EL Q + LT + + + + Q + +I+VAT R
Sbjct: 819 IVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQ 878
Query: 616 VHLKANNMRLKEDLSMLVVDEAD-LIFSXGYEDEI 717
+ A + L + + +V+DEAD ++ S + +E+
Sbjct: 879 DFVNAGEVSLSK-MKYIVLDEADRMVDSNDFGEEV 912
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 46.4 bits (105), Expect = 2e-05
Identities = 34/143 (23%), Positives = 74/143 (51%), Gaps = 8/143 (5%)
Frame = +1
Query: 280 IQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQKILNLKNTSKHQSIRALILSPSKEL 459
+Q+ +I ++ EG+ +++ A TG GKT AF +P I+ L + ++ +S + SPS +
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKP---SPSILI 75
Query: 460 CGQITSVIGDLTIKC--AREVRCID-ISANGDTQTQKAILS-----DKPDIVVATPSRAL 615
++++ L +C ++C+D + D + K + + + DI T +
Sbjct: 76 MASTSALVDQLFNRCELILGLQCMDNVEPIRDIKIDKLVANHPFTKGQCDIAFCTIGKLK 135
Query: 616 VHLKANNMRLKEDLSMLVVDEAD 684
++ ++ L ++L +++DEAD
Sbjct: 136 ATIECGDVCL-DNLKTIILDEAD 157
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 44.8 bits (101), Expect = 6e-05
Identities = 36/161 (22%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Frame = +1
Query: 226 DDRILKAISQLGWPEPTLIQETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQKILNLKN 405
D RI+ + + +Q+ +I ++ EG+ +++ A TG GKT AF +P I+ L +
Sbjct: 101 DQRIVNNLKCVHVTTFNAVQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALKNRQ 160
Query: 406 TSKHQSIRALILSPSKELCGQITSVIGDLTIKC--AREVRCID-ISANGDTQTQKAILS- 573
++ + + SPS + ++++ L +C ++C+D + D + K + +
Sbjct: 161 SNCFEYTKP---SPSILIMASTSALVDQLFNRCELILGLQCMDNVEPIRDIKIDKLVANH 217
Query: 574 ----DKPDIVVATPSRALVHLKANNMRLKEDLSMLVVDEAD 684
+ DI T + ++ ++ L ++L +++DEAD
Sbjct: 218 PFTKGQCDIAFCTIGKLKATIECGDVCL-DNLKTIILDEAD 257
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 44.8 bits (101), Expect = 6e-05
Identities = 30/96 (31%), Positives = 55/96 (57%)
Frame = +1
Query: 430 ALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQKAILSDKPDIVVATPSR 609
A+I++P+KEL QI + L+ + ++ I++ + + + L D+ +VV TP +
Sbjct: 99 AVIIAPTKELITQIYKLFVKLS-QALPFLQAINL-CDINEEENSVWLEDRSHVVVTTPGK 156
Query: 610 ALVHLKANNMRLKEDLSMLVVDEADLIFSXGYEDEI 717
L+ + + +S LV+DEADL+ S GYE+E+
Sbjct: 157 -LLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEM 191
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 39.1 bits (87), Expect = 0.003
Identities = 34/128 (26%), Positives = 61/128 (47%)
Frame = +1
Query: 283 QETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQKILNLKNTSKHQSIRALILSPSKELC 462
QE + L+GK+ ++ A TGSGKT A +I++ +S+ + +AL ++P+ +
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKT-VIAANIIKEHFE-SRSSEGKRFKALFMTPNSMIL 354
Query: 463 GQITSVIGDLTIKCAREVRCIDISANGDTQTQKAILSDKPDIVVATPSRALVHLKANNMR 642
Q + I V I D + ++ K D++VATP + +V+L +
Sbjct: 355 NQQAASISSY----LDHVYHTQIIQGSDNVPTRNVIQSK-DLIVATP-QMIVNLCNEHRN 408
Query: 643 LKEDLSML 666
+D S L
Sbjct: 409 SLDDESRL 416
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 39.1 bits (87), Expect = 0.003
Identities = 34/128 (26%), Positives = 61/128 (47%)
Frame = +1
Query: 283 QETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQKILNLKNTSKHQSIRALILSPSKELC 462
QE + L+GK+ ++ A TGSGKT A +I++ +S+ + +AL ++P+ +
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKT-VIAANIIKEHFE-SRSSEGKRFKALFMTPNSMIL 354
Query: 463 GQITSVIGDLTIKCAREVRCIDISANGDTQTQKAILSDKPDIVVATPSRALVHLKANNMR 642
Q + I V I D + ++ K D++VATP + +V+L +
Sbjct: 355 NQQAASISSY----LDHVYHTQIIQGSDNVPTRNVIQSK-DLIVATP-QMIVNLCNEHRN 408
Query: 643 LKEDLSML 666
+D S L
Sbjct: 409 SLDDESRL 416
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 34.7 bits (76), Expect = 0.067
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +1
Query: 283 QETAIPLLLEGKDVLMRARTGSGKTAAFAVPVIQKILNLKNTSKHQSIRALILSPSKELC 462
QE + LEGK+ ++ A TGSGKT ++ I + TS+ + R ++L P L
Sbjct: 375 QEELVQPALEGKNCVIVAPTGSGKTEVAIYAALKHI--EERTSQGKPSRVVLLVPKIPLV 432
Query: 463 GQ 468
GQ
Sbjct: 433 GQ 434
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 32.3 bits (70), Expect = 0.36
Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 5/149 (3%)
Frame = +1
Query: 259 GWPEPTLIQETAIPLLLEGKD-VLMRARTGSGKTAAFAVPVIQKI---LNLKNTSKHQSI 426
G+ IQ L K+ +L+ A TG+GKT + ++Q+I L + K
Sbjct: 471 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVALLTMLQEIGNHLAEDGSVKLDEF 530
Query: 427 RALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQKAILSDKPDIVVATPS 606
+ + ++P K L + ++G + + A + GD Q K ++V TP
Sbjct: 531 KIVYIAPMKSL---VQEMVGSFSKRLAPFGITVG-EMTGDAQMSKEQFM-ATQVIVCTPE 585
Query: 607 R-ALVHLKANNMRLKEDLSMLVVDEADLI 690
+ +V K + + +L++DE L+
Sbjct: 586 KYDVVTRKGGERAYNQMVRLLIIDEIHLL 614
Score = 28.7 bits (61), Expect = 4.4
Identities = 25/126 (19%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Frame = +1
Query: 316 KDVLMRARTGSGKTAAFAVPVIQKILNLKNTSKHQSIRALILSPSKELCGQITSVIGDLT 495
++V++ A GSGKTA + V++ + +NT + +A+ ++P +++ T V D
Sbjct: 1338 ENVIVCAPNGSGKTAIAELAVLR---HFENTPE---AKAVYITPMEDMA---TKVYADWK 1388
Query: 496 IKCAREVRCIDISANGDTQTQKAILSDKPDIVVATPSR-ALVHLKANNMRLKEDLSMLVV 672
+ + + G+ QT L+ + ++++TP R + + + +++ + +
Sbjct: 1389 RRLEPAIGHTIVLLTGE-QTMDLKLAQRGQLIISTPERWDNISRRWKQRKSVQNVKLFIA 1447
Query: 673 DEADLI 690
D+ +I
Sbjct: 1448 DDLHMI 1453
>U55375-2|AAC69044.2| 285|Caenorhabditis elegans Uncoordinated
protein 1 protein.
Length = 285
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 499 KCAREVRCIDISANGDTQTQKAILSDKPDIVVATP-SRALVHLKANNMRLKEDLSMLV 669
+ ARE R ++A G+ + +A L + D++ A P + L HL+A N E S +V
Sbjct: 213 EAAREARAKVVAAEGEQKASRA-LKEAADVIQANPVALQLRHLQALNSIAAEHNSTIV 269
>EF538426-1|ABQ08183.1| 289|Caenorhabditis elegans stomatin-like
protein UNC-1 protein.
Length = 289
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 499 KCAREVRCIDISANGDTQTQKAILSDKPDIVVATP-SRALVHLKANNMRLKEDLSMLV 669
+ ARE R ++A G+ + +A L + D++ A P + L HL+A N E S +V
Sbjct: 217 EAAREARAKVVAAEGEQKASRA-LKEAADVIQANPVALQLRHLQALNSIAAEHNSTIV 273
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 28.7 bits (61), Expect = 4.4
Identities = 32/149 (21%), Positives = 64/149 (42%), Gaps = 5/149 (3%)
Frame = +1
Query: 259 GWPEPTLIQETAIPLLLEGKD-VLMRARTGSGKTAAFAVPVIQKI---LNLKNTSKHQSI 426
G+ IQ L K+ +L+ A TG+GKT + ++Q+I L + K +
Sbjct: 273 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVGLLTMLQEIGNHLAEDGSVKLEEF 332
Query: 427 RALILSPSKELCGQITSVIGDLTIKCAREVRCIDISANGDTQTQKAILSDKPDIVVATPS 606
+ + ++P+K L + ++G + + A I+ T ++V TP
Sbjct: 333 KIVYIAPTKSL---VQEMVGSFSKRLAP----FGITVGEMTGQMNKEQFMATQVIVCTPE 385
Query: 607 R-ALVHLKANNMRLKEDLSMLVVDEADLI 690
+ +V K + + +L++DE L+
Sbjct: 386 KYDVVTRKGGERAYNQMVRLLIIDEIHLL 414
>Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical
protein Y70C5A.2 protein.
Length = 1037
Score = 27.9 bits (59), Expect = 7.7
Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 8/118 (6%)
Frame = -3
Query: 575 SESIAFCV*VSPFAEISIHRTSRAHFIVKSPITDVI--C-PHSSLLGDNIKA--LML*CL 411
S S+ + + A IS AH V+S I V C P S +G + A L C+
Sbjct: 245 STSLTIILFIGHHATISTIIFILAHRFVRSRILRVYNNCVPKSHRVGAIVDADRLDTHCV 304
Query: 410 LVFFKFNIFCITGTAKAAVLPDPVRALIRTSFPSNNN---GMAVSCMSVGSGHPNCDM 246
F + T T K ++ + PS + G + +S+G GHP+CD+
Sbjct: 305 PQIQVFAVITATTTVKQMKYVSEYLGSMKNTLPSVIDAAIGYKKTALSLGFGHPSCDI 362
>U49944-1|AAA93415.3| 508|Caenorhabditis elegans Long protein 2
protein.
Length = 508
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 561 FLCLSVSICRDIDTSYFTCTFYS*ISYYRCYL 466
FLCLSV CR + Y C S ++ YL
Sbjct: 158 FLCLSVGKCRTVPLDYHNCMMAS-TKHWSVYL 188
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,868,049
Number of Sequences: 27780
Number of extensions: 293286
Number of successful extensions: 855
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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