Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_J18
         (692 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249...    32   0.50 
10_08_0244 + 16129365-16129424,16130203-16130391,16130918-16131049     31   0.87 
05_04_0231 + 19254766-19255153,19255245-19255480,19256609-192566...    29   2.6  
10_02_0115 + 5445580-5445606,5446118-5446609                           28   6.1  
05_02_0119 + 6793292-6793613,6795793-6795952,6796416-6796458,679...    28   6.1  

>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
            27125387-27125656,27126027-27126377,27126480-27126757,
            27126887-27128330
          Length = 1398

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +2

Query: 314  GLPGSKGQKGDDGFTGRQGFPGFVGLPGPRG 406
            G  G  G+ G  GF GR G  GF+G  GP G
Sbjct: 1035 GPGGFGGRDGPGGFGGRDGPGGFIGREGPGG 1065



 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +2

Query: 314  GLPGSKGQKGDDGFTGRQGFPGFVGLPGPRG 406
            G  G  G+ G  GF GR+G  GF G  GP G
Sbjct: 1044 GPGGFGGRDGPGGFIGREGPGGFGGREGPVG 1074


>10_08_0244 + 16129365-16129424,16130203-16130391,16130918-16131049
          Length = 126

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 502 FWSLRSCHTSKPFITLWPLWTIYSRYPWSSTLTTRSW 392
           F +L+ C  S P + +W    + +  PW  TLT  +W
Sbjct: 67  FVNLKICRPSLPEVLIWRAIDLVTFDPWQLTLTNSNW 103


>05_04_0231 +
           19254766-19255153,19255245-19255480,19256609-19256632,
           19257612-19258009,19258109-19258241,19258399-19258488,
           19258613-19258843
          Length = 499

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 37/101 (36%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
 Frame = -1

Query: 431 QVSLELHVDHEVLVGQQNLGILDDQ*NHRLLSALYCQADPKDKMDSHLHVLLLDQAIQDD 252
           QV L   +    LVG   LG   DQ +HRLL   +    P   + SHLH   L  A Q  
Sbjct: 216 QVDLLSRMHSPYLVGL--LGYCADQ-SHRLLVFEFM---PNGSLKSHLHRRALAPAEQPP 269

Query: 251 P-DYQ---GFQLFQVFRVGLDH----PAVQHRKRPCQDILL 153
           P D+Q   G  L     +   H    PAV HR   C +ILL
Sbjct: 270 PLDWQTRLGIALDCARALEFLHEHSSPAVIHRDFKCSNILL 310


>10_02_0115 + 5445580-5445606,5446118-5446609
          Length = 172

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 211 TRKTWNSWKPW*SGSSWIAWSKRRTWR 291
           TR TW    P   G+ W+AW +RR WR
Sbjct: 13  TRDTWYL-VPMIPGT-WVAWRRRRRWR 37


>05_02_0119 +
           6793292-6793613,6795793-6795952,6796416-6796458,
           6797015-6797335
          Length = 281

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 287 GDDCPFCPSGLPGSKGQKGDDGFTGRQGFPGFVGLPG 397
           G    + P+G+P  +   GD G  G Q   G  G PG
Sbjct: 103 GGGLHYAPAGVPEQQDPTGDGGGQGWQAGAGLHGTPG 139


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,774,856
Number of Sequences: 37544
Number of extensions: 351480
Number of successful extensions: 821
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)