Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_J18
         (692 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    25   0.52 
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   4.8  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    22   6.4  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   6.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   6.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   6.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   6.4  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   6.4  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   8.4  

>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 538 GICRCIQTSFRSFWSLR 488
           G+C C +TSF+  W  R
Sbjct: 77  GVCICRKTSFKDLWDKR 93


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -2

Query: 103 IYSWGALFTRFPN 65
           IYSW AL   FPN
Sbjct: 27  IYSWKALEFAFPN 39


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 532 CRCIQTSFRSFWSLR 488
           C C +TSF+  W  R
Sbjct: 79  CICRKTSFKDLWDKR 93


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +1

Query: 217 KTWNSWKPW 243
           K+WN W  W
Sbjct: 694 KSWNKWNDW 702


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +1

Query: 217 KTWNSWKPW 243
           K+WN W  W
Sbjct: 694 KSWNKWNDW 702


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +1

Query: 217 KTWNSWKPW 243
           K+WN W  W
Sbjct: 694 KSWNKWNDW 702


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/28 (32%), Positives = 11/28 (39%), Gaps = 1/28 (3%)
 Frame = +1

Query: 208 PTRKTWNSWKPW*SGSSWIA-WSKRRTW 288
           P   TW  +K W  G  W + W     W
Sbjct: 120 PFSATWEVFKVWIFGDLWCSIWLAVDVW 147


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 310 FGSAWQ*RAERRRWF 354
           +GSAWQ   ER++++
Sbjct: 169 WGSAWQWNEERKQYY 183


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 285 MEMTVHFVLRVCLAVKGRKETMVLLVV 365
           + MT+  VL + +A+K R+  M+   V
Sbjct: 232 LPMTIIIVLYILIAIKLRRSRMLTATV 258


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,483
Number of Sequences: 438
Number of extensions: 3368
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)