Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_J17
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006733-6|AAF60489.2|  581|Caenorhabditis elegans Hypothetical ...    62   4e-10
U70848-1|AAB09107.2|  434|Caenorhabditis elegans Hypothetical pr...    61   6e-10
U51925-1|AAA97909.1|  396|Caenorhabditis elegans trehalase I pro...    31   0.60 
AJ512337-1|CAD54510.1|  567|Caenorhabditis elegans trehalase pro...    31   0.60 
AF039713-5|AAB96724.2|  567|Caenorhabditis elegans Trehalase pro...    31   0.60 
Z81085-2|CAB03114.2|  618|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U41543-4|AAM69116.1|  575|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U41543-3|AAB37024.1|  572|Caenorhabditis elegans Hypothetical pr...    28   7.4  

>AC006733-6|AAF60489.2|  581|Caenorhabditis elegans Hypothetical
           protein Y32H12A.5 protein.
          Length = 581

 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 27/74 (36%), Positives = 40/74 (54%)
 Frame = +2

Query: 476 HLLDAEMAEVLKAGVLSDEIDLGALAHNAAEQAEEFVRKVWEASWNVCHFXHLPRWLQDN 655
           HL  ++  + L+  +  +E+    +     E     +++ WEA W   +F  LP WLQDN
Sbjct: 227 HLDHSDDDDELEVEINEEEV---IIPSETGEGPRAVIKRFWEARWKATNFETLPEWLQDN 283

Query: 656 DYLHKGHXPPLPSF 697
           +YL  GH PPLPSF
Sbjct: 284 EYLRTGHRPPLPSF 297


>U70848-1|AAB09107.2|  434|Caenorhabditis elegans Hypothetical
           protein C43G2.1 protein.
          Length = 434

 Score = 61.3 bits (142), Expect = 6e-10
 Identities = 27/57 (47%), Positives = 37/57 (64%)
 Frame = +2

Query: 527 DEIDLGALAHNAAEQAEEFVRKVWEASWNVCHFXHLPRWLQDNDYLHKGHXPPLPSF 697
           DE+++  +  + +EQ    V K +EA W V  + HLP WLQDN++L  GH PPLPSF
Sbjct: 133 DELEVD-VKEDRSEQTG-IVTKTYEARWKVLKYEHLPEWLQDNEFLRHGHRPPLPSF 187


>U51925-1|AAA97909.1|  396|Caenorhabditis elegans trehalase I
           protein.
          Length = 396

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 329 IQYQIPLPTSSLVSITRRWEIGNHWPP 249
           ++Y   LPTS  +S T++W+  N WPP
Sbjct: 256 LKYTKGLPTSLAMSSTQQWDKENAWPP 282


>AJ512337-1|CAD54510.1|  567|Caenorhabditis elegans trehalase
           protein.
          Length = 567

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 329 IQYQIPLPTSSLVSITRRWEIGNHWPP 249
           ++Y   LPTS  +S T++W+  N WPP
Sbjct: 427 LKYTKGLPTSLAMSSTQQWDKENAWPP 453


>AF039713-5|AAB96724.2|  567|Caenorhabditis elegans Trehalase
           protein 1 protein.
          Length = 567

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 329 IQYQIPLPTSSLVSITRRWEIGNHWPP 249
           ++Y   LPTS  +S T++W+  N WPP
Sbjct: 427 LKYTKGLPTSLAMSSTQQWDKENAWPP 453


>Z81085-2|CAB03114.2|  618|Caenorhabditis elegans Hypothetical
           protein F46F3.2 protein.
          Length = 618

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 332 GIQYQIPLPTSSLVSITRRWEIGNHWPP 249
           G+ YQ PLP+S+++   R+ E     PP
Sbjct: 238 GLDYQRPLPSSTILPFLRKMEYDARQPP 265


>U41543-4|AAM69116.1|  575|Caenorhabditis elegans Hypothetical
           protein F46H5.7b protein.
          Length = 575

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 23/66 (34%), Positives = 35/66 (53%)
 Frame = +2

Query: 467 EDQHLLDAEMAEVLKAGVLSDEIDLGALAHNAAEQAEEFVRKVWEASWNVCHFXHLPRWL 646
           E+Q   DA   EV    V + E+ LG LA+N+  QAE   +++ EA+W       + +  
Sbjct: 285 ENQLNSDAH-EEVKSTAVRALEVKLG-LANNSIRQAEAEKQQLQEANWYANE--RVGKLE 340

Query: 647 QDNDYL 664
           Q+N YL
Sbjct: 341 QENGYL 346


>U41543-3|AAB37024.1|  572|Caenorhabditis elegans Hypothetical
           protein F46H5.7a protein.
          Length = 572

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 23/66 (34%), Positives = 35/66 (53%)
 Frame = +2

Query: 467 EDQHLLDAEMAEVLKAGVLSDEIDLGALAHNAAEQAEEFVRKVWEASWNVCHFXHLPRWL 646
           E+Q   DA   EV    V + E+ LG LA+N+  QAE   +++ EA+W       + +  
Sbjct: 285 ENQLNSDAH-EEVKSTAVRALEVKLG-LANNSIRQAEAEKQQLQEANWYANE--RVGKLE 340

Query: 647 QDNDYL 664
           Q+N YL
Sbjct: 341 QENGYL 346


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,034,313
Number of Sequences: 27780
Number of extensions: 336980
Number of successful extensions: 808
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)