BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_J09
(450 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61927 Cluster: 60S ribosomal protein L37; n=40; Eutele... 127 1e-28
UniRef50_Q4WWR1 Cluster: 60S ribosomal protein L37; n=4; Pezizom... 118 8e-26
UniRef50_Q8LFH7 Cluster: 60S ribosomal protein L37-1; n=9; Eukar... 114 7e-25
UniRef50_UPI00005A470B Cluster: PREDICTED: similar to ribosomal ... 110 2e-23
UniRef50_P51402 Cluster: 60S ribosomal protein L37-B; n=29; Fung... 106 2e-22
UniRef50_P49622 Cluster: 60S ribosomal protein L37; n=90; Eukary... 101 7e-21
UniRef50_Q6MVB5 Cluster: Probable ribosomal protein L37.e.A, cyt... 73 1e-18
UniRef50_Q22C94 Cluster: Ribosomal protein L37e containing prote... 93 3e-18
UniRef50_Q4P4Y4 Cluster: Ribosomal protein L37; n=1; Ustilago ma... 83 4e-15
UniRef50_Q8SRH5 Cluster: 60S RIBOSOMAL PROTEIN L37; n=2; Fungi/M... 73 3e-12
UniRef50_Q2KGJ3 Cluster: Ribosomal protein L37; n=1; Magnaporthe... 70 2e-11
UniRef50_Q4V3Y2 Cluster: Ribosomal protein L37; n=1; Drosophila ... 67 2e-10
UniRef50_Q97BU6 Cluster: 50S ribosomal protein L37e; n=4; Archae... 56 3e-07
UniRef50_Q9HPS3 Cluster: 50S ribosomal protein L37e; n=10; Eurya... 56 3e-07
UniRef50_A5UJK8 Cluster: Ribosomal protein L37e; n=1; Methanobre... 56 5e-07
UniRef50_Q8U0P5 Cluster: 50S ribosomal protein L37e; n=18; Archa... 55 6e-07
UniRef50_Q4V414 Cluster: Ribosomal protein L37; n=1; Drosophila ... 52 4e-06
UniRef50_Q6LY46 Cluster: 50S ribosomal protein L37e; n=12; Archa... 51 1e-05
UniRef50_A3H8B0 Cluster: Ribosomal protein L37e; n=1; Caldivirga... 49 4e-05
UniRef50_A2YQV5 Cluster: Putative uncharacterized protein; n=1; ... 40 0.025
UniRef50_A0RXE5 Cluster: Methionyl-tRNA synthetase; n=3; Thermop... 33 2.2
>UniRef50_P61927 Cluster: 60S ribosomal protein L37; n=40;
Euteleostomi|Rep: 60S ribosomal protein L37 - Homo
sapiens (Human)
Length = 97
Score = 127 bits (307), Expect = 1e-28
Identities = 57/93 (61%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Frame = +1
Query: 49 TKGXSSFGKRRNKXHTLCRXCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXX 228
TKG SSFGKRRNK HTLCR CG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 2 TKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGT 61
Query: 229 XXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 324
MRHLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 62 GRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>UniRef50_Q4WWR1 Cluster: 60S ribosomal protein L37; n=4;
Pezizomycotina|Rep: 60S ribosomal protein L37 -
Aspergillus fumigatus (Sartorya fumigata)
Length = 158
Score = 118 bits (283), Expect = 8e-26
Identities = 51/81 (62%), Positives = 57/81 (70%)
Frame = +1
Query: 52 KGXSSFGKRRNKXHTLCRXCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXX 231
KG SSFGKR NK HTLCR CGR S+HIQKS CA CGYP+AK+R Y+WS KA
Sbjct: 69 KGTSSFGKRHNKSHTLCRRCGRRSFHIQKSTCANCGYPSAKVRKYNWSEKAKRRKTTGTG 128
Query: 232 XMRHLKIVRRRFRNGFKEGKP 294
M HLK V RRF+NGF+ G P
Sbjct: 129 RMSHLKDVHRRFKNGFQVGTP 149
>UniRef50_Q8LFH7 Cluster: 60S ribosomal protein L37-1; n=9;
Eukaryota|Rep: 60S ribosomal protein L37-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 95
Score = 114 bits (275), Expect = 7e-25
Identities = 53/92 (57%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
Frame = +1
Query: 52 KGXSSFGKRRNKXHTLCRXCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXX 231
KG SFGKRRNK HTLC CGR S+HIQKS+C+ C YPAA+ R+Y+WSVKA
Sbjct: 3 KGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTGTG 62
Query: 232 XMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 324
MR+L+ V RRF+ F+EG + TP KA ASS
Sbjct: 63 RMRYLRNVPRRFKTCFREGTQATPRNKAAASS 94
>UniRef50_UPI00005A470B Cluster: PREDICTED: similar to ribosomal
protein L37; n=3; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L37 - Canis familiaris
Length = 124
Score = 110 bits (264), Expect = 2e-23
Identities = 51/92 (55%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 52 KGXSSFGKRRNKXHTLCRXCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXX 231
KG SSFGKRRNK HTLCR CG +YH+QKS C +C YPA R Y+W KA
Sbjct: 30 KGTSSFGKRRNKMHTLCRRCGSKAYHLQKSTCGKCRYPAKWKRKYNWGAKAKRRNTTGTG 89
Query: 232 XMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 324
MRHLKIV R R+GF+ G P P + AVA+S
Sbjct: 90 RMRHLKIVYHRCRHGFRGGTTPKPKRAAVAAS 121
>UniRef50_P51402 Cluster: 60S ribosomal protein L37-B; n=29;
Fungi/Metazoa group|Rep: 60S ribosomal protein L37-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 88
Score = 106 bits (255), Expect = 2e-22
Identities = 44/79 (55%), Positives = 54/79 (68%)
Frame = +1
Query: 52 KGXSSFGKRRNKXHTLCRXCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXX 231
KG SFGKR NK HTLC CGR S+H+QK C+ CGYP+AK RS++W+ KA
Sbjct: 3 KGTPSFGKRHNKSHTLCNRCGRRSFHVQKKTCSSCGYPSAKTRSHNWAAKAKRRHTTGTG 62
Query: 232 XMRHLKIVRRRFRNGFKEG 288
MR+LK V RRF+NGF+ G
Sbjct: 63 RMRYLKHVSRRFKNGFQTG 81
>UniRef50_P49622 Cluster: 60S ribosomal protein L37; n=90;
Eukaryota|Rep: 60S ribosomal protein L37 -
Caenorhabditis elegans
Length = 91
Score = 101 bits (242), Expect = 7e-21
Identities = 42/84 (50%), Positives = 53/84 (63%)
Frame = +1
Query: 49 TKGXSSFGKRRNKXHTLCRXCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXX 228
TKG +FGK+ K HTLC+ CG+SS+HIQK +CA CGY AK R+Y+W K+
Sbjct: 2 TKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTGT 61
Query: 229 XXMRHLKIVRRRFRNGFKEGKPTP 300
RHL+ V RFRNGF+ P P
Sbjct: 62 GRTRHLRDVNARFRNGFRGTTPKP 85
>UniRef50_Q6MVB5 Cluster: Probable ribosomal protein L37.e.A,
cytosolic; n=1; Neurospora crassa|Rep: Probable
ribosomal protein L37.e.A, cytosolic - Neurospora crassa
Length = 124
Score = 72.9 bits (171), Expect(2) = 1e-18
Identities = 34/73 (46%), Positives = 41/73 (56%)
Frame = +1
Query: 103 RXCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFK 282
R R S H QK CA CGYPAAK R Y+WS KA +R+L V R+F+NGF+
Sbjct: 52 RFTSRRSLHNQKKVCASCGYPAAKTRKYNWSEKAKRRKTTGTGRLRYLSTVSRKFKNGFQ 111
Query: 283 EGKPTPPKKAVAS 321
G P K VA+
Sbjct: 112 TGVPKGSKGPVAA 124
Score = 41.9 bits (94), Expect(2) = 1e-18
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = +1
Query: 49 TKGXSSFGKRRNKXHTLCRXCGR 117
TKG SSFGKR K H LCR CGR
Sbjct: 2 TKGTSSFGKRHTKTHGLCRRCGR 24
>UniRef50_Q22C94 Cluster: Ribosomal protein L37e containing protein;
n=5; Eukaryota|Rep: Ribosomal protein L37e containing
protein - Tetrahymena thermophila SB210
Length = 214
Score = 93.1 bits (221), Expect = 3e-18
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 49 TKGXSSFGKRRNKXHTLCRXCGRSSYHIQKSKCAQCGYPAAKLRSYH-WSVKAXXXXXXX 225
T+G +FGKR K HTLCR CG+++YH QK +CA CGYP AK+R Y W K
Sbjct: 48 TRGTPAFGKRHQKTHTLCRRCGKATYHKQKLRCAACGYPDAKMRRYDGWGQKVRDRKGQG 107
Query: 226 XXXMRHLKIVRRRFRNGFKEG 288
MR++K + RR +NGF+ G
Sbjct: 108 TGRMRYMKTIARRAKNGFRSG 128
>UniRef50_Q4P4Y4 Cluster: Ribosomal protein L37; n=1; Ustilago
maydis|Rep: Ribosomal protein L37 - Ustilago maydis
(Smut fungus)
Length = 125
Score = 82.6 bits (195), Expect = 4e-15
Identities = 35/68 (51%), Positives = 42/68 (61%)
Frame = +1
Query: 85 KXHTLCRXCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRR 264
K HT+CR C ++H QK CA CGYPAAK+RSY W KA MR+LK V RR
Sbjct: 50 KTHTVCRRCNARAFHRQKKVCASCGYPAAKIRSYEWGQKAKRRKTTGTGRMRYLKNVSRR 109
Query: 265 FRNGFKEG 288
+NGF+ G
Sbjct: 110 AKNGFQTG 117
>UniRef50_Q8SRH5 Cluster: 60S RIBOSOMAL PROTEIN L37; n=2;
Fungi/Metazoa group|Rep: 60S RIBOSOMAL PROTEIN L37 -
Encephalitozoon cuniculi
Length = 90
Score = 72.9 bits (171), Expect = 3e-12
Identities = 35/82 (42%), Positives = 48/82 (58%)
Frame = +1
Query: 49 TKGXSSFGKRRNKXHTLCRXCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXX 228
+KG +SFGK+ + +CR CGR SYH QK+ C+ CGYP K+R+ S+KA
Sbjct: 2 SKGTASFGKKNKRNTEMCRRCGRQSYHKQKNSCSSCGYPNPKMRN-PGSIKARRRRTIGT 60
Query: 229 XXMRHLKIVRRRFRNGFKEGKP 294
MR++K R +NG K G P
Sbjct: 61 GRMRYMKRELRAAKNGHK-GDP 81
>UniRef50_Q2KGJ3 Cluster: Ribosomal protein L37; n=1; Magnaporthe
grisea 70-15|Rep: Ribosomal protein L37 - Magnaporthe
grisea 70-15
Length = 188
Score = 70.1 bits (164), Expect = 2e-11
Identities = 30/60 (50%), Positives = 36/60 (60%)
Frame = +1
Query: 115 RSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEGKP 294
R S H+QK CA CGYPAAK R Y+WS KA MR+L V R+F+N F+ G P
Sbjct: 118 RRSLHVQKHTCASCGYPAAKTRKYNWSEKAKRRKTTGTGRMRYLSTVTRKFKNDFQTGTP 177
>UniRef50_Q4V3Y2 Cluster: Ribosomal protein L37; n=1; Drosophila
melanogaster|Rep: Ribosomal protein L37 - Drosophila
melanogaster (Fruit fly)
Length = 103
Score = 66.9 bits (156), Expect = 2e-10
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +1
Query: 49 TKGXSSFGKRRNKXHTLCRXCGRSSYHIQKSKCAQ 153
TKG +SFGKR NK HT+CR CG SSYH+QKSKC+Q
Sbjct: 2 TKGTTSFGKRHNKTHTICRRCGNSSYHLQKSKCSQ 36
>UniRef50_Q97BU6 Cluster: 50S ribosomal protein L37e; n=4;
Archaea|Rep: 50S ribosomal protein L37e - Thermoplasma
volcanium
Length = 54
Score = 56.4 bits (130), Expect = 3e-07
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +1
Query: 49 TKGXSSFGKRRNK-XHTLCRXCGRSSYHIQKSKCAQCGYPAAKLRSYHWS 195
+ G + GK NK H CR CG +Y+++ +C+ CG+PA ++RSY W+
Sbjct: 2 SNGTAVMGKINNKKTHITCRRCGHHTYNVRTKRCSHCGFPAPRIRSYKWA 51
>UniRef50_Q9HPS3 Cluster: 50S ribosomal protein L37e; n=10;
Euryarchaeota|Rep: 50S ribosomal protein L37e -
Halobacterium salinarium (Halobacterium halobium)
Length = 58
Score = 56.4 bits (130), Expect = 3e-07
Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 55 GXSSFGKRRNKXHTLCRXCGRSSYHIQKSKCAQCGYPA-AKLRSYHWSVK 201
G S GK+ HT CR CG SYH +K C+ CG+ A AK R Y W K
Sbjct: 5 GTPSQGKKNTTTHTKCRRCGEKSYHTKKKVCSSCGFGASAKRRDYEWQGK 54
>UniRef50_A5UJK8 Cluster: Ribosomal protein L37e; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
protein L37e - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 55
Score = 55.6 bits (128), Expect = 5e-07
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 70 GKRRNKXHTLCRXCGRSSYHIQKSKCAQCGYPAAK-LRSYHWSVK 201
GK+ K H CR CGR++YHI K CA CG+ +K +R Y W K
Sbjct: 2 GKKNKKTHIRCRRCGRNTYHIHKKVCASCGFGKSKRIRRYSWQNK 46
>UniRef50_Q8U0P5 Cluster: 50S ribosomal protein L37e; n=18;
Archaea|Rep: 50S ribosomal protein L37e - Pyrococcus
furiosus
Length = 62
Score = 55.2 bits (127), Expect = 6e-07
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +1
Query: 55 GXSSFGKRRNK-XHTLCRXCGRSSYHIQKSKCAQCGY-PAAKLRSYHWSVK 201
G ++FGKR + H CR CGR SY+++K CA CG+ + +LR Y WS K
Sbjct: 4 GTATFGKRNSTPTHIRCRRCGRVSYNVKKGYCAACGFGRSRRLRKYRWSKK 54
>UniRef50_Q4V414 Cluster: Ribosomal protein L37; n=1; Drosophila
melanogaster|Rep: Ribosomal protein L37 - Drosophila
melanogaster (Fruit fly)
Length = 78
Score = 52.4 bits (120), Expect = 4e-06
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +1
Query: 49 TKGXSSFGKRRNKXHTLCRXCGRSSYH 129
TKG +SFGKR NK HT+CR CG SSYH
Sbjct: 2 TKGTTSFGKRHNKTHTICRRCGNSSYH 28
>UniRef50_Q6LY46 Cluster: 50S ribosomal protein L37e; n=12;
Archaea|Rep: 50S ribosomal protein L37e - Methanococcus
maripaludis
Length = 64
Score = 51.2 bits (117), Expect = 1e-05
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +1
Query: 49 TKGXSSFGKR-RNKXHTLCRXCGRSSYHIQKSKCAQCGY-PAAKLRSYHWSVK 201
TKG S GK + H +CR CGR ++H++K CA CG+ ++K++ + W K
Sbjct: 2 TKGTPSQGKHNKGSNHIVCRRCGRRAFHVRKKVCAACGFGRSSKIKRFAWQWK 54
>UniRef50_A3H8B0 Cluster: Ribosomal protein L37e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L37e -
Caldivirga maquilingensis IC-167
Length = 61
Score = 49.2 bits (112), Expect = 4e-05
Identities = 22/39 (56%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 49 TKGXSSFGKR-RNKXHTLCRXCGRSSYHIQKSKCAQCGY 162
TKG SFG+ R K H C CGR SY+I K CA CGY
Sbjct: 2 TKGTPSFGRMSRGKTHIRCPRCGRHSYNIVKGYCAACGY 40
>UniRef50_A2YQV5 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 89
Score = 39.9 bits (89), Expect = 0.025
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 157 GYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEGKPTPPKKAVA 318
G+ + S +WSVKA MR+++ V +RF++ F+EG P+K A
Sbjct: 33 GFNFCDVISDNWSVKAIRRKTTGTGRMRYMRHVPKRFKSNFREGTEATPRKRAA 86
>UniRef50_A0RXE5 Cluster: Methionyl-tRNA synthetase; n=3;
Thermoprotei|Rep: Methionyl-tRNA synthetase -
Cenarchaeum symbiosum
Length = 548
Score = 33.5 bits (73), Expect = 2.2
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = +1
Query: 40 DKXTKGXSSFGKRRNKXHTLCRXCGRSSYHIQKSKCAQCGYPAAKLRSYHW 192
D+ +G K + LC CGR I CA CG K S H+
Sbjct: 137 DRYVRGTCPHCKAAEQYSDLCESCGRVPEEIADPHCAICGNTPVKRSSRHY 187
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 329,362,150
Number of Sequences: 1657284
Number of extensions: 5493235
Number of successful extensions: 10924
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 10693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10921
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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