Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_J07
(687 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007110-1|AAH07110.2| 310|Homo sapiens C11orf54 protein protein. 163 7e-40
AL136605-1|CAB66540.1| 315|Homo sapiens hypothetical protein pr... 163 7e-40
CR533538-1|CAG38569.1| 315|Homo sapiens PTD012 protein. 160 4e-39
BC012298-1|AAH12298.1| 265|Homo sapiens chromosome 11 open read... 79 1e-14
AK130578-1|BAC85386.1| 241|Homo sapiens protein ( Homo sapiens ... 32 1.7
AY509035-1|AAS91662.1| 1386|Homo sapiens roundabout-like protein... 31 5.1
BC028024-1|AAH28024.2| 450|Homo sapiens HCN3 protein protein. 30 6.7
BC000066-1|AAH00066.1| 571|Homo sapiens Unknown (protein for IM... 30 6.7
AL713999-31|CAI95100.1| 774|Homo sapiens hyperpolarization acti... 30 6.7
AK096803-1|BAC04865.1| 188|Homo sapiens protein ( Homo sapiens ... 30 8.9
AK057259-1|BAB71399.1| 188|Homo sapiens protein ( Homo sapiens ... 30 8.9
AF488550-1|AAO49470.1| 774|Homo sapiens hyperpolarization activ... 30 8.9
AF231919-1|AAF72943.1| 2248|Homo sapiens C21orf108 protein. 30 8.9
AB040968-1|BAA96059.2| 711|Homo sapiens KIAA1535 protein protein. 30 8.9
AB011111-1|BAA25465.2| 2046|Homo sapiens KIAA0539 protein protein. 30 8.9
>BC007110-1|AAH07110.2| 310|Homo sapiens C11orf54 protein protein.
Length = 310
Score = 163 bits (395), Expect = 7e-40
Identities = 83/211 (39%), Positives = 125/211 (59%), Gaps = 3/211 (1%)
Frame = +2
Query: 8 PMLTEPPYYLKSPGLTGDAKLVEIGGPPYLVPQVKRDKIYDLAKLLEHLNRDPAFLAGAG 187
P LT+ P+ G+ G ++ E+GG PYL+P V + K+YDL K+ + + AF+ GAG
Sbjct: 34 PDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLVNQKKVYDLNKIAKEIKLPGAFILGAG 93
Query: 188 AGPWPYLGVNCE--GIVNLSVRNGTVDQGTRIVSVHPVGAPKGSSGYLQQQLPNDETRTA 361
AGP+ LG N E ++ + G+ V+P Y ++ + + A
Sbjct: 94 AGPFQTLGFNSEFMPVIQTESEHKPPVNGSYFAHVNPADGGCLLEKYSEKC---HDFQCA 150
Query: 362 LLGNYLLTEGKPGKVIKVVAKNRTGKSNFITSIRETLKTHYGDKVVGLGGAFVLRAGRGY 541
LL N +EG+PGKVI+V AK RTG NF+T +RETL+ HYG+K +G+GG F+++ G+
Sbjct: 151 LLANLFASEGQPGKVIEVKAKRRTGPLNFVTCMRETLEKHYGNKPIGMGGTFIIQKGKVK 210
Query: 542 FHVMP-DFSRAPLCSDAAVDSXLHYFELDAP 631
H+MP +FS PL SD V+ LH++E+ AP
Sbjct: 211 SHIMPAEFSSCPLNSDEEVNKWLHFYEMKAP 241
>AL136605-1|CAB66540.1| 315|Homo sapiens hypothetical protein
protein.
Length = 315
Score = 163 bits (395), Expect = 7e-40
Identities = 83/211 (39%), Positives = 125/211 (59%), Gaps = 3/211 (1%)
Frame = +2
Query: 8 PMLTEPPYYLKSPGLTGDAKLVEIGGPPYLVPQVKRDKIYDLAKLLEHLNRDPAFLAGAG 187
P LT+ P+ G+ G ++ E+GG PYL+P V + K+YDL K+ + + AF+ GAG
Sbjct: 39 PDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLVNQKKVYDLNKIAKEIKLPGAFILGAG 98
Query: 188 AGPWPYLGVNCE--GIVNLSVRNGTVDQGTRIVSVHPVGAPKGSSGYLQQQLPNDETRTA 361
AGP+ LG N E ++ + G+ V+P Y ++ + + A
Sbjct: 99 AGPFQTLGFNSEFMPVIQTESEHKPPVNGSYFAHVNPADGGCLLEKYSEKC---HDFQCA 155
Query: 362 LLGNYLLTEGKPGKVIKVVAKNRTGKSNFITSIRETLKTHYGDKVVGLGGAFVLRAGRGY 541
LL N +EG+PGKVI+V AK RTG NF+T +RETL+ HYG+K +G+GG F+++ G+
Sbjct: 156 LLANLFASEGQPGKVIEVKAKRRTGPLNFVTCMRETLEKHYGNKPIGMGGTFIIQKGKVK 215
Query: 542 FHVMP-DFSRAPLCSDAAVDSXLHYFELDAP 631
H+MP +FS PL SD V+ LH++E+ AP
Sbjct: 216 SHIMPAEFSSCPLNSDEEVNKWLHFYEMKAP 246
>CR533538-1|CAG38569.1| 315|Homo sapiens PTD012 protein.
Length = 315
Score = 160 bits (389), Expect = 4e-39
Identities = 82/211 (38%), Positives = 124/211 (58%), Gaps = 3/211 (1%)
Frame = +2
Query: 8 PMLTEPPYYLKSPGLTGDAKLVEIGGPPYLVPQVKRDKIYDLAKLLEHLNRDPAFLAGAG 187
P LT+ P+ G+ G ++ E+GG PYL+P V + K+YDL K+ + + AF+ GAG
Sbjct: 39 PDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLVNQKKVYDLNKIAKEIKLPGAFILGAG 98
Query: 188 AGPWPYLGVNCE--GIVNLSVRNGTVDQGTRIVSVHPVGAPKGSSGYLQQQLPNDETRTA 361
AGP+ LG N E ++ + G+ V+P Y ++ + + A
Sbjct: 99 AGPFQTLGFNSEFMPVIQTESEHKPPVNGSYFAHVNPADGGCLLEKYSEKC---HDFQCA 155
Query: 362 LLGNYLLTEGKPGKVIKVVAKNRTGKSNFITSIRETLKTHYGDKVVGLGGAFVLRAGRGY 541
LL N +EG+PGKVI+V AK RTG N +T +RETL+ HYG+K +G+GG F+++ G+
Sbjct: 156 LLANLFASEGQPGKVIEVKAKRRTGPLNLVTCMRETLEKHYGNKPIGMGGTFIIQKGKVK 215
Query: 542 FHVMP-DFSRAPLCSDAAVDSXLHYFELDAP 631
H+MP +FS PL SD V+ LH++E+ AP
Sbjct: 216 SHIMPAEFSSCPLNSDEEVNKWLHFYEMKAP 246
>BC012298-1|AAH12298.1| 265|Homo sapiens chromosome 11 open reading
frame 54 protein.
Length = 265
Score = 79.0 bits (186), Expect = 1e-14
Identities = 44/134 (32%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Frame = +2
Query: 8 PMLTEPPYYLKSPGLTGDAKLVEIGGPPYLVPQVKRDKIYDLAKLLEHLNRDPAFLAGAG 187
P LT+ P+ G+ G ++ E+GG PYL+P V + K+YDL K+ + + AF+ GAG
Sbjct: 39 PDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLVNQKKVYDLNKIAKEIKLPGAFILGAG 98
Query: 188 AGPWPYLGVNCE--GIVNLSVRNGTVDQGTRIVSVHPVGAPKGSSGYLQQQLPNDETRTA 361
AGP+ LG N E ++ + G+ V+P Y ++ + + A
Sbjct: 99 AGPFQTLGFNSEFMPVIQTESEHKPPVNGSYFAHVNPADGGCLLEKYSEK---CHDFQCA 155
Query: 362 LLGNYLLTEGKPGK 403
LL N +EG+PGK
Sbjct: 156 LLANLFASEGQPGK 169
Score = 30.3 bits (65), Expect = 6.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 557 DFSRAPLCSDAAVDSXLHYFELDAP 631
+FS PL SD V+ LH++E+ AP
Sbjct: 172 EFSSCPLNSDEEVNKWLHFYEMKAP 196
>AK130578-1|BAC85386.1| 241|Homo sapiens protein ( Homo sapiens
cDNA FLJ27068 fis, clone SPL01475. ).
Length = 241
Score = 32.3 bits (70), Expect = 1.7
Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 5/87 (5%)
Frame = -1
Query: 291 GCTDTILVPWSTVPLRTLRFTIPSQFTPRYGHGPAPAPARKAGSRFKC----SSSLARSY 124
G + P V L + P Q GHGP P P + G C +SS R
Sbjct: 82 GLVCALTAPGLGVGLTPAPWRPPGQSRMLEGHGPWPTPGSRPGPTCVCLLTPASSSLRPC 141
Query: 123 ILSRLTC-GTKYGGPPISTSLASPVNP 46
+ R TC G G + T ASP +P
Sbjct: 142 LSDRGTCPGAPQGA--VGTCRASPQSP 166
>AY509035-1|AAS91662.1| 1386|Homo sapiens roundabout-like protein 3
protein.
Length = 1386
Score = 30.7 bits (66), Expect = 5.1
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 47 GLTGDAKLVEIGGPPYLVPQVKRDKIYDLAKLLEHLNRDPAFLAGAGA 190
G+ LV++ PP L P ++ LA L + R+PAFLAG+GA
Sbjct: 854 GVPSAPVLVQLPSPPDLEPGLEVGA--GLAVRLARVLREPAFLAGSGA 899
>BC028024-1|AAH28024.2| 450|Homo sapiens HCN3 protein protein.
Length = 450
Score = 30.3 bits (65), Expect = 6.7
Identities = 27/102 (26%), Positives = 35/102 (34%), Gaps = 5/102 (4%)
Frame = +1
Query: 40 ITRIDWRRQTGRDRGPAVLSAAGQTRQDIR-PGQAAGTLEXXXXXXXXXWSRTVAVP--- 207
+ R WR G P V AG R P A TL + P
Sbjct: 318 LARSAWR-SAGSPASPLVPVRAGPWASTSRLPAPPARTLHASLSRAGRSQVSLLGPPPGG 376
Query: 208 -GRELRGYSKP*CPQRYC*PRYQNSVGAPSRSAQGQQRLPPA 330
GR L +P + P+ G+P R G +RLPP+
Sbjct: 377 GGRRLGPRGRPLSASQPSLPQRATGDGSPGRKGSGSERLPPS 418
>BC000066-1|AAH00066.1| 571|Homo sapiens Unknown (protein for
IMAGE:3507934) protein.
Length = 571
Score = 30.3 bits (65), Expect = 6.7
Identities = 27/102 (26%), Positives = 35/102 (34%), Gaps = 5/102 (4%)
Frame = +1
Query: 40 ITRIDWRRQTGRDRGPAVLSAAGQTRQDIR-PGQAAGTLEXXXXXXXXXWSRTVAVP--- 207
+ R WR G P V AG R P A TL + P
Sbjct: 439 LARSAWR-SAGSPASPLVPVRAGPWASTSRLPAPPARTLHASLSRAGRSQVSLLGPPPGG 497
Query: 208 -GRELRGYSKP*CPQRYC*PRYQNSVGAPSRSAQGQQRLPPA 330
GR L +P + P+ G+P R G +RLPP+
Sbjct: 498 GGRRLGPRGRPLSASQPSLPQRATGDGSPGRKGSGSERLPPS 539
>AL713999-31|CAI95100.1| 774|Homo sapiens hyperpolarization
activated cyclic nucleotide-gated potassium channel 3
protein.
Length = 774
Score = 30.3 bits (65), Expect = 6.7
Identities = 27/102 (26%), Positives = 35/102 (34%), Gaps = 5/102 (4%)
Frame = +1
Query: 40 ITRIDWRRQTGRDRGPAVLSAAGQTRQDIR-PGQAAGTLEXXXXXXXXXWSRTVAVP--- 207
+ R WR G P V AG R P A TL + P
Sbjct: 642 LARSAWR-SAGSPASPLVPVRAGPWASTSRLPAPPARTLHASLSRAGRSQVSLLGPPPGG 700
Query: 208 -GRELRGYSKP*CPQRYC*PRYQNSVGAPSRSAQGQQRLPPA 330
GR L +P + P+ G+P R G +RLPP+
Sbjct: 701 GGRRLGPRGRPLSASQPSLPQRATGDGSPGRKGSGSERLPPS 742
>AK096803-1|BAC04865.1| 188|Homo sapiens protein ( Homo sapiens
cDNA FLJ39484 fis, clone PROST2014925. ).
Length = 188
Score = 29.9 bits (64), Expect = 8.9
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 371 FRATQSWSRRWAAVAGGSRCCPWALLLGAPTLFW 270
FR W R W ++ GG R P LL+ L W
Sbjct: 28 FRGGMLWGRPWDSMRGGHRQHPHPLLVAPAVLRW 61
>AK057259-1|BAB71399.1| 188|Homo sapiens protein ( Homo sapiens
cDNA FLJ32697 fis, clone TESTI2000372. ).
Length = 188
Score = 29.9 bits (64), Expect = 8.9
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 371 FRATQSWSRRWAAVAGGSRCCPWALLLGAPTLFW 270
FR W R W ++ GG R P LL+ L W
Sbjct: 28 FRGGMLWGRPWDSMRGGHRQHPHPLLVAPAVLRW 61
>AF488550-1|AAO49470.1| 774|Homo sapiens hyperpolarization
activated cyclic nucleotide-gated potassium channel
protein.
Length = 774
Score = 29.9 bits (64), Expect = 8.9
Identities = 27/102 (26%), Positives = 35/102 (34%), Gaps = 5/102 (4%)
Frame = +1
Query: 40 ITRIDWRRQTGRDRGPAVLSAAGQTRQDIR-PGQAAGTLEXXXXXXXXXWSRTVAVP--- 207
+ R WR G P V AG R P A TL + P
Sbjct: 642 LARSAWR-SAGSPASPLVPVRAGPWASTSRLPAPPARTLHASLSRAGRSQVSLLGPPPGG 700
Query: 208 -GRELRGYSKP*CPQRYC*PRYQNSVGAPSRSAQGQQRLPPA 330
GR L +P + P+ G+P R G +RLPP+
Sbjct: 701 GGRRLGPRGRPLSASQPSLPQRAXGDGSPGRKGSGSERLPPS 742
>AF231919-1|AAF72943.1| 2248|Homo sapiens C21orf108 protein.
Length = 2248
Score = 29.9 bits (64), Expect = 8.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 515 FVLRAGRGYFHVMPDFSRAPLCSDAA 592
+ L A RG FH++ F +PLC +AA
Sbjct: 1779 YELCARRGIFHIILSFFHSPLCDEAA 1804
>AB040968-1|BAA96059.2| 711|Homo sapiens KIAA1535 protein protein.
Length = 711
Score = 29.9 bits (64), Expect = 8.9
Identities = 27/102 (26%), Positives = 35/102 (34%), Gaps = 5/102 (4%)
Frame = +1
Query: 40 ITRIDWRRQTGRDRGPAVLSAAGQTRQDIR-PGQAAGTLEXXXXXXXXXWSRTVAVP--- 207
+ R WR G P V AG R P A TL + P
Sbjct: 579 LARSAWR-SAGSPASPLVPVRAGPWASTSRLPAPPARTLHASLSRAGRSQVSLLGPPPGG 637
Query: 208 -GRELRGYSKP*CPQRYC*PRYQNSVGAPSRSAQGQQRLPPA 330
GR L +P + P+ G+P R G +RLPP+
Sbjct: 638 GGRRLGPRGRPLSASQPSLPQRATGDGSPGRKGTGSERLPPS 679
>AB011111-1|BAA25465.2| 2046|Homo sapiens KIAA0539 protein protein.
Length = 2046
Score = 29.9 bits (64), Expect = 8.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 515 FVLRAGRGYFHVMPDFSRAPLCSDAA 592
+ L A RG FH++ F +PLC +AA
Sbjct: 1577 YELCARRGIFHIILSFFHSPLCDEAA 1602
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,049,221
Number of Sequences: 237096
Number of extensions: 2424067
Number of successful extensions: 9082
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9066
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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