Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_J06
         (701 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q32SZ3 Cluster: Putative uncharacterized protein; n=2; ...    33   9.0  
UniRef50_A3YAW8 Cluster: Putative uncharacterized protein; n=1; ...    33   9.0  

>UniRef50_Q32SZ3 Cluster: Putative uncharacterized protein; n=2;
           Shigella flexneri|Rep: Putative uncharacterized protein
           - Shigella flexneri
          Length = 349

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 19/45 (42%), Positives = 24/45 (53%)
 Frame = -2

Query: 565 FFTTKLYIFSLLLMITHIGSKFYNTKLWYIKCLFTLYILNTKNSG 431
           FFT K    S+     +I SKFY   + Y    FT+ I+NT NSG
Sbjct: 58  FFTIKKNDLSIF---DYIKSKFYRLMIPYFTFAFTILIINTINSG 99


>UniRef50_A3YAW8 Cluster: Putative uncharacterized protein; n=1;
           Marinomonas sp. MED121|Rep: Putative uncharacterized
           protein - Marinomonas sp. MED121
          Length = 225

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 20/42 (47%), Positives = 24/42 (57%)
 Frame = +2

Query: 287 K*NLNLKIESVFLILDIFILYSGSKQ*INSFKKALLMGIKCN 412
           K N  L +E  FL  D  +L SG    INSF+K  L+GIK N
Sbjct: 158 KLNEVLSVEKQFLYFDE-LLVSGDNLSINSFRKCSLVGIKVN 198


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,303,955
Number of Sequences: 1657284
Number of extensions: 11730698
Number of successful extensions: 18524
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18519
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)