Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_J06
(701 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 27 0.11
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 24 1.4
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 23 1.8
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 23 3.2
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 22 4.2
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 22 4.2
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 22 4.2
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 22 4.2
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 22 4.2
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 22 4.2
AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 22 4.2
AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory recept... 22 5.6
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 27.5 bits (58), Expect = 0.11
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -3
Query: 396 INNA-FLKLLIHCLLPEYNMKISKMRNTLSILRFRFYLTLKIIVFT 262
+N A F KLLI+ YN K S+ + +S+L+ F I +FT
Sbjct: 110 VNKAKFGKLLINLYTINYNFKESERNDYVSLLQLVFVFCYFIYLFT 155
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 23.8 bits (49), Expect = 1.4
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -3
Query: 156 RVM*ETTTECIHFQMLHK 103
+++ +++ ECIH +LHK
Sbjct: 76 KILTQSSFECIHLSVLHK 93
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 23.4 bits (48), Expect = 1.8
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = -3
Query: 567 YFSQPNYTYFHFC**SHTLAVSFTIQNFGTLNVFLHFIS*IQKIQALTMNEKLHFIPINN 388
YF Q N Y ++ SH + FT+ N + + +Q + + +N++L I + N
Sbjct: 151 YFVQRNQEYKYYQILSHLSGIFFTVFNVAQCYLTTELVLMLQ-TRFVILNKQLTKITVKN 209
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 22.6 bits (46), Expect = 3.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 412 FFIHCQCLNFLYLRYKV*KDI*CTKVLYCKTYCQ 513
FF C L F+YL ++ ++ +K+LY TY Q
Sbjct: 12 FFSFCCILFFIYLYWQQTSNLTTSKLLY--TYRQ 43
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 22.2 bits (45), Expect = 4.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 378 KLLIHCLLPEYNMKISKMRNTLSILRFRFYLTLKIIV 268
K L++ LL YN+ + N L +F LTL+ I+
Sbjct: 5 KRLLNNLLGPYNVLERPVANESEPLEVKFGLTLQQII 41
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.2 bits (45), Expect = 4.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 378 KLLIHCLLPEYNMKISKMRNTLSILRFRFYLTLKIIV 268
K L++ LL YN+ + N L +F LTL+ I+
Sbjct: 5 KRLLNNLLGPYNVLERPVANESEPLEVKFGLTLQQII 41
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.2 bits (45), Expect = 4.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 378 KLLIHCLLPEYNMKISKMRNTLSILRFRFYLTLKIIV 268
K L++ LL YN+ + N L +F LTL+ I+
Sbjct: 5 KRLLNNLLGPYNVLERPVANESEPLEVKFGLTLQQII 41
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.2 bits (45), Expect = 4.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 378 KLLIHCLLPEYNMKISKMRNTLSILRFRFYLTLKIIV 268
K L++ LL YN+ + N L +F LTL+ I+
Sbjct: 5 KRLLNNLLGPYNVLERPVANESEPLEVKFGLTLQQII 41
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.2 bits (45), Expect = 4.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 378 KLLIHCLLPEYNMKISKMRNTLSILRFRFYLTLKIIV 268
K L++ LL YN+ + N L +F LTL+ I+
Sbjct: 5 KRLLNNLLGPYNVLERPVANESEPLEVKFGLTLQQII 41
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 22.2 bits (45), Expect = 4.2
Identities = 9/38 (23%), Positives = 20/38 (52%)
Frame = +2
Query: 227 FKLDYIILIKLLVNTIILRVK*NLNLKIESVFLILDIF 340
F ++Y ++ +L ++ + N + SVF + +IF
Sbjct: 349 FPINYTLVFSVLKQYVMQQQVKNFRHSVRSVFFLSEIF 386
>AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger
transcription factor protein.
Length = 228
Score = 22.2 bits (45), Expect = 4.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 369 IHCLLPEYNMKISKMRNTLSILRFRFYLT 283
IHCLL E + M ++LR YL+
Sbjct: 87 IHCLLQEQQQAGANMAAAANLLRPHPYLS 115
>AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory receptor
candidate 5 protein.
Length = 522
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 206 TKAWQIPFKLDYIILI 253
TKAW +PF + II +
Sbjct: 107 TKAWFLPFVVTNIIFV 122
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,955
Number of Sequences: 336
Number of extensions: 3872
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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