Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_J06
         (701 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    24   5.3  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    24   5.3  
Z69981-1|CAA93821.1|  327|Anopheles gambiae maltase precursor pr...    23   7.0  

>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 378 KLLIHCLLPEYNMKISKMRNTLSILRFRFYLTLKIIV 268
           K L+H LL  YN+    + N    L+  F LTL  I+
Sbjct: 8   KRLLHHLLDNYNVLERPVVNESDPLQLSFGLTLMQII 44


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 378 KLLIHCLLPEYNMKISKMRNTLSILRFRFYLTLKIIV 268
           K L+H LL  YN+    + N    L+  F LTL  I+
Sbjct: 40  KRLLHDLLDSYNILERPVVNESDPLQLSFGLTLMQII 76


>Z69981-1|CAA93821.1|  327|Anopheles gambiae maltase precursor
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 513 LAVSFTIQNFGTLNVFLHFIS*IQKIQALTMNEKL 409
           LAV   + NFGT     +F S I+ I  +T+ + L
Sbjct: 231 LAVVRELTNFGTYITLANFGSQIEVISGITLADAL 265


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,048
Number of Sequences: 2352
Number of extensions: 13291
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)