Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_J06
         (701 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81595-1|CAB04753.2|  337|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U80027-3|AAC48131.1|  350|Caenorhabditis elegans Serpentine rece...    29   4.3  
U97012-6|AAK39147.1|  337|Caenorhabditis elegans Serpentine rece...    28   7.4  
Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical pr...    27   9.8  
AC199239-1|ABO33277.1|  147|Caenorhabditis elegans Hypothetical ...    27   9.8  

>Z81595-1|CAB04753.2|  337|Caenorhabditis elegans Hypothetical
           protein T22H2.1 protein.
          Length = 337

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 562 FTTKLYIFSLLLMITHIGSKFYNTKLWYIKCLF 464
           +++KLY+   LL +TH+   F    +WY K  +
Sbjct: 127 YSSKLYLDKFLLFLTHLFPFFTGISMWYSKLTY 159


>U80027-3|AAC48131.1|  350|Caenorhabditis elegans Serpentine
           receptor, class j protein7 protein.
          Length = 350

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -2

Query: 628 YA*LASHIVWSQRALLQP--LPIFFTTKLYIFSLLLMITHIGS 506
           YA L  H V+   AL  P  L +FF     +F  LLM+ H GS
Sbjct: 104 YALLIIHFVYRYMALFYPHKLHLFFRPIGILFLTLLMLFHAGS 146


>U97012-6|AAK39147.1|  337|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 15 protein.
          Length = 337

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/33 (33%), Positives = 22/33 (66%)
 Frame = +2

Query: 185 DISVSIFTKAWQIPFKLDYIILIKLLVNTIILR 283
           +I++SIF K+W I F +  +IL  +L+  ++ +
Sbjct: 4   EIALSIFVKSWHIFFGITGVILNLVLILLVVFK 36


>Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical protein
            R09H10.5 protein.
          Length = 1603

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 19/66 (28%), Positives = 28/66 (42%)
 Frame = +2

Query: 56   YLNVLKCSLLIVKKCGL*SI*KCIHSVVVSYITLMFAFKC*NDDISVSIFTKAWQIPFKL 235
            Y NV+ CSL   +   + S     + VV S     F     N+ +S S+   +  +PF  
Sbjct: 872  YYNVMDCSLFASRSFYISSATNDAYVVVYSPTIQNFTASVTNNGVSQSLVADSHSVPFFA 931

Query: 236  DYIILI 253
             Y I I
Sbjct: 932  SYQIKI 937


>AC199239-1|ABO33277.1|  147|Caenorhabditis elegans Hypothetical
           protein 6R55.2 protein.
          Length = 147

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 549 YTYFHFC**SHTLAVSFTIQNFGTLNVFLHF 457
           YTY H    SHT ++S     F +++ F+HF
Sbjct: 93  YTYTHTHTLSHTTSLSIFFLTFSSVSSFVHF 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,156,598
Number of Sequences: 27780
Number of extensions: 316126
Number of successful extensions: 507
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)