Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_J04
(732 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0340 + 42851330-42851413,42852179-42852245,42852336-42852592 88 8e-18
02_05_0137 - 26181793-26182055,26182172-26182238,26182392-26182478 87 2e-17
05_01_0065 + 461182-461271,462222-462288,462408-462664 86 2e-17
12_01_0743 + 6676906-6677007,6677160-6677226,6678246-6678529 83 2e-16
08_02_0958 - 23044708-23046045,23046131-23046363,23047059-230471... 74 1e-13
08_02_0956 + 23026108-23027146,23027255-23027395,23029334-230295... 74 1e-13
02_05_0889 - 32532495-32533832,32533919-32534151,32534321-325344... 72 5e-13
09_02_0530 + 10285844-10287217 60 1e-09
07_01_0887 + 7380332-7380370,7381286-7381640,7382752-7382886,738... 40 0.002
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 38 0.006
09_02_0511 - 10079180-10079355,10079656-10079722,10080144-100801... 33 0.18
06_03_0914 + 25920277-25920405,25920783-25920810,25920890-259209... 31 0.94
06_02_0224 + 13250377-13250383,13250418-13250665,13250768-13251136 29 5.0
11_04_0442 - 17790811-17790889,17791047-17791114,17791144-177911... 28 6.6
05_01_0299 - 2322204-2322734,2324089-2326164 28 6.6
04_04_0721 - 27549212-27549646,27549739-27549962,27550074-275502... 28 8.8
03_02_0999 - 13105030-13105434,13105716-13105850,13105933-131061... 28 8.8
03_02_0998 - 13097675-13098079,13098307-13098441,13098522-130987... 28 8.8
02_05_0961 - 33103024-33103555,33107323-33107432,33107577-331077... 28 8.8
02_05_0194 - 26627119-26627487,26627606-26627856,26627937-26628063 28 8.8
01_03_0260 - 14323503-14323603,14323751-14323990,14324212-143242... 28 8.8
>01_07_0340 + 42851330-42851413,42852179-42852245,42852336-42852592
Length = 135
Score = 87.8 bits (208), Expect = 8e-18
Identities = 38/89 (42%), Positives = 63/89 (70%)
Frame = +1
Query: 193 KLFTREELKSRSTRADAVLIIHNEVYDVTKFLLEHPGGEEVLLEKAGQDASEPFEDVSHS 372
K+ T EE+ +T+ D LII +VY+VTKFL +HPGG++VLL +DA++ FEDV HS
Sbjct: 5 KVLTLEEVSKHNTKDDCWLIIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHS 64
Query: 373 SDARSLMKKYKIGELVESDRVQTRAGFSP 459
+ AR++M +Y +G+ +++ + T+ ++P
Sbjct: 65 TTARAMMDEYYVGD-IDATTIPTKVKYTP 92
>02_05_0137 - 26181793-26182055,26182172-26182238,26182392-26182478
Length = 138
Score = 86.6 bits (205), Expect = 2e-17
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Frame = +1
Query: 178 MEGEMKLFTREELKSRSTRADAVLIIHNEVYDVTKFLLEHPGGEEVLLEKAGQDASEPFE 357
M G +++ +E+ + R D LII +VYDV+ F+ EHPGG+EVLL G+DA+ F
Sbjct: 1 MAGGKAVYSFQEVSKHNDRKDCWLIIAGKVYDVSPFMEEHPGGDEVLLACTGKDATADFN 60
Query: 358 DVSHSSDARSLMKKYKIGELVESDRVQTRAGFSPQWTNEQAQ-EQGNWSSWLTPLLLGVA 534
D+ H++ A+ LM +Y IGE V++ V + + + A+ + + +WLT L L V
Sbjct: 61 DIGHTATAKELMPQYCIGE-VDASTVPAKPAYRVVSEDASAKPDAASQGAWLTALQLAVP 119
Query: 535 ATLL 546
LL
Sbjct: 120 VVLL 123
>05_01_0065 + 461182-461271,462222-462288,462408-462664
Length = 137
Score = 86.2 bits (204), Expect = 2e-17
Identities = 37/89 (41%), Positives = 63/89 (70%)
Frame = +1
Query: 193 KLFTREELKSRSTRADAVLIIHNEVYDVTKFLLEHPGGEEVLLEKAGQDASEPFEDVSHS 372
K++T EE+ +++ D LII +VY+V+KFL +HPGG++VLL G+DA++ FEDV HS
Sbjct: 7 KVYTLEEVAKHNSKDDCWLIIGGKVYNVSKFLEDHPGGDDVLLSSTGKDATDDFEDVGHS 66
Query: 373 SDARSLMKKYKIGELVESDRVQTRAGFSP 459
+ AR++M +Y +G+ +++ + R + P
Sbjct: 67 TTARAMMDEYYVGD-IDTSTIPARTKYVP 94
>12_01_0743 + 6676906-6677007,6677160-6677226,6678246-6678529
Length = 150
Score = 83.4 bits (197), Expect = 2e-16
Identities = 39/76 (51%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = +1
Query: 193 KLFTREELKSRSTRADAVLIIHNEVYDVTKFLLEHPGGEEVLLE-KAGQDASEPFEDVSH 369
KLF+ ++ ++R D ++IH +VYDVTKFL +HPGGE+VLL A DA+E FEDV H
Sbjct: 11 KLFSASDVVGHASRKDCWVVIHGKVYDVTKFLEDHPGGEDVLLHASASGDATEAFEDVGH 70
Query: 370 SSDARSLMKKYKIGEL 417
S+ A S+M Y IG +
Sbjct: 71 STSAISMMNNYLIGSI 86
>08_02_0958 -
23044708-23046045,23046131-23046363,23047059-23047199,
23047296-23048334
Length = 916
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/76 (43%), Positives = 49/76 (64%)
Frame = +1
Query: 193 KLFTREELKSRSTRADAVLIIHNEVYDVTKFLLEHPGGEEVLLEKAGQDASEPFEDVSHS 372
K FT E++ S++ A +++H VYD T FL +HPGG + +L AG D +E F D HS
Sbjct: 542 KQFTMSEVRKHSSQDSAWIVVHGHVYDCTAFLKDHPGGADSILINAGTDCTEEF-DAIHS 600
Query: 373 SDARSLMKKYKIGELV 420
A++L+ Y+IGEL+
Sbjct: 601 DKAKALLDTYRIGELI 616
>08_02_0956 +
23026108-23027146,23027255-23027395,23029334-23029566,
23029652-23030989
Length = 916
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/76 (43%), Positives = 49/76 (64%)
Frame = +1
Query: 193 KLFTREELKSRSTRADAVLIIHNEVYDVTKFLLEHPGGEEVLLEKAGQDASEPFEDVSHS 372
K FT E++ S++ A +++H VYD T FL +HPGG + +L AG D +E F D HS
Sbjct: 542 KQFTMSEVRKHSSQDSAWIVVHGHVYDCTAFLKDHPGGADSILINAGTDCTEEF-DAIHS 600
Query: 373 SDARSLMKKYKIGELV 420
A++L+ Y+IGEL+
Sbjct: 601 DKAKALLDTYRIGELI 616
>02_05_0889 -
32532495-32533832,32533919-32534151,32534321-32534461,
32534564-32535521
Length = 889
Score = 71.7 bits (168), Expect = 5e-13
Identities = 36/88 (40%), Positives = 53/88 (60%)
Frame = +1
Query: 199 FTREELKSRSTRADAVLIIHNEVYDVTKFLLEHPGGEEVLLEKAGQDASEPFEDVSHSSD 378
+T E++ +T A +I+H VYD T FL +HPGG + ++ AG D +E F D HS
Sbjct: 516 YTMSEVRRHTTPESAWIIVHGHVYDCTGFLKDHPGGADSIMINAGTDCTEEF-DAIHSDK 574
Query: 379 ARSLMKKYKIGELVESDRVQTRAGFSPQ 462
AR L++ Y+IGEL + T + +SPQ
Sbjct: 575 ARGLLEMYRIGEL-----IVTGSDYSPQ 597
>09_02_0530 + 10285844-10287217
Length = 457
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/76 (38%), Positives = 48/76 (63%)
Frame = +1
Query: 190 MKLFTREELKSRSTRADAVLIIHNEVYDVTKFLLEHPGGEEVLLEKAGQDASEPFEDVSH 369
+++ + EEL++ ++R D + I +VYDVT ++ HPGG+ LL AGQDA++ F H
Sbjct: 16 VRMISSEELRAHASRDDLWISISGDVYDVTAWVPHHPGGDIPLLTLAGQDATDAFA-AYH 74
Query: 370 SSDARSLMKKYKIGEL 417
AR L+ ++ +G L
Sbjct: 75 PPSARPLLGRFLVGRL 90
>07_01_0887 +
7380332-7380370,7381286-7381640,7382752-7382886,
7383029-7383138
Length = 212
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +1
Query: 193 KLFTREELKSRSTRADAVLIIHNEVYDVTKFLLEHPGGEEVLLEKAGQDASEPF 354
+L + EE+K T ++ VY++ ++ HPGG ++L++ AG+D++ F
Sbjct: 140 RLISLEEVKQHKTGDSIWTVLKGRVYNIAPYMKFHPGGVDMLMKAAGKDSTALF 193
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 208 EELKSRSTRADAVLIIHNEVYDVTKFLLE--HPGGEEVLLEKAGQDASEPFEDVSHSSDA 381
EE+ +R AD ++I+H +YD + L+ + G + + +D E E+ SS +
Sbjct: 346 EEIPARKVDADEIMILHERIYDSKRIALKTMNESGYHKRMRRRMEDDEEEVEEAPVSSRS 405
Query: 382 RSLMK 396
RSL K
Sbjct: 406 RSLKK 410
>09_02_0511 -
10079180-10079355,10079656-10079722,10080144-10080181,
10080255-10080336
Length = 120
Score = 33.5 bits (73), Expect = 0.18
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +1
Query: 265 VYDVTKFLLEHPGGEEVL 318
VYDVT ++ EHPGG+E+L
Sbjct: 41 VYDVTSYVEEHPGGDEIL 58
>06_03_0914 +
25920277-25920405,25920783-25920810,25920890-25920990,
25921356-25921479,25921793-25921903,25922222-25922397,
25922766-25922848,25922935-25923007,25923630-25923695,
25923776-25923818,25924600-25924739,25924878-25925090,
25925397-25925481,25925558-25925852,25926855-25927110,
25927237-25927450,25927701-25927912,25928054-25928203
Length = 832
Score = 31.1 bits (67), Expect = 0.94
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -2
Query: 446 ARVCTRSLSTNSPILYFFINDLASELWLTSSNGSEAS*PAFSRSTSSPPGCSR 288
A + + N PIL +D + ++W+ +N +A F S+PP C R
Sbjct: 199 ASIVSLHFFANEPILMSSASDNSIKMWIFDTNDGDARLLRFRSGHSAPPRCIR 251
>06_02_0224 + 13250377-13250383,13250418-13250665,13250768-13251136
Length = 207
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 496 WSSWLTPLLLGVAATLLYRYLFV*ATRSP 582
W W+ PL+ G A L+YRY+++ +P
Sbjct: 173 WIYWVGPLVGGGLAGLVYRYVYMCGDHAP 201
>11_04_0442 - 17790811-17790889,17791047-17791114,17791144-17791166,
17791210-17795913,17797414-17797624,17798478-17798666
Length = 1757
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 431 RSLSTNSPILYFFINDLASELWLTSSNGSEA 339
R L T+SP+ N + +E WL++S GS+A
Sbjct: 1118 RQLRTHSPMPVELFNCMRTEKWLSTSIGSKA 1148
>05_01_0299 - 2322204-2322734,2324089-2326164
Length = 868
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -2
Query: 545 SSVAATPSSSGVSQELQLPCSCACSLVHCGLKPARVCTRSLSTNSP 408
++ AA ++ GV+ +L +P SC C +H + C R ++ N P
Sbjct: 66 AAAAAAVAAEGVNLDL-IPGSCDCKDIHPTAEELLECQRYVNWNDP 110
>04_04_0721 -
27549212-27549646,27549739-27549962,27550074-27550227,
27568477-27568821,27568899-27569152,27569257-27569383
Length = 512
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 490 GNWSSWLTPLLLGVAATLLYRYLFV 564
GNW W+ PL+ G A L+Y +F+
Sbjct: 213 GNWVYWVGPLIGGGLAGLVYDDVFI 237
>03_02_0999 -
13105030-13105434,13105716-13105850,13105933-13106133,
13106374-13106673,13106764-13106964,13107246-13107410,
13107484-13107663,13108171-13108212,13108327-13108404
Length = 568
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 187 EMKLFTREELKSRSTRADAVLIIHNEVYDVTKFLLEHPGGEEVLL--EKAGQDASEPFE- 357
E+K F + E S + A ++I + KFL +H GE + + K G E +
Sbjct: 43 ELKAFNKFENTSDALSAATLIIDSKPTKGLRKFLQKHCEGETLAVADSKLGNAIKEKLKI 102
Query: 358 DVSHSSDARSLMK 396
D H+S LM+
Sbjct: 103 DCLHNSAVMELMR 115
>03_02_0998 -
13097675-13098079,13098307-13098441,13098522-13098722,
13099060-13099359,13099449-13099649,13099932-13100096,
13100170-13100349,13100896-13100937,13101040-13101117
Length = 568
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 187 EMKLFTREELKSRSTRADAVLIIHNEVYDVTKFLLEHPGGEEVLL--EKAGQDASEPFE- 357
E+K F + E S + A ++I + KFL +H GE + + K G E +
Sbjct: 43 ELKAFNKFENTSDALSAATLIIDSKPTKGLRKFLQKHCEGETLAVADSKLGNAIKEKLKI 102
Query: 358 DVSHSSDARSLMK 396
D H+S LM+
Sbjct: 103 DCLHNSAVMELMR 115
>02_05_0961 -
33103024-33103555,33107323-33107432,33107577-33107707,
33107779-33107870,33108210-33108337,33108658-33108723,
33108815-33108907,33108979-33109128,33109553-33109578,
33109674-33109826,33110140-33110228,33110335-33110418,
33110564-33110598,33110702-33110842,33111045-33111128,
33111208-33111215,33111590-33111746
Length = 692
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 256 HNEVYDVTKFLLEHPGGEEVLLEKAGQDASEPFEDVSHSSDARSLMKKYKIGEL 417
+N++ V K L +P E DAS ED+S S D + ++ I +L
Sbjct: 396 YNKISPVFKSSLANPKHMETEFWNREDDASISVEDISDSDDGKEVVSNTAISKL 449
>02_05_0194 - 26627119-26627487,26627606-26627856,26627937-26628063
Length = 248
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 490 GNWSSWLTPLLLGVAATLLYRYLFV 564
GNW W+ PL+ G A L+Y +F+
Sbjct: 212 GNWVYWVGPLIGGGLAGLVYGDVFI 236
>01_03_0260 -
14323503-14323603,14323751-14323990,14324212-14324275,
14324349-14324654,14324841-14325055,14325551-14325845,
14325965-14326129,14326324-14327352,14333553-14333814,
14334135-14334631,14338714-14340123
Length = 1527
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 505 WLTPLLLGVAATLLYRYL 558
WL PL +GVA LLY YL
Sbjct: 465 WLMPLQVGVALGLLYLYL 482
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,393,314
Number of Sequences: 37544
Number of extensions: 288379
Number of successful extensions: 1028
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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