Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_J04
(732 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78539-6|CAB01732.2| 134|Caenorhabditis elegans Hypothetical pr... 101 7e-22
AF003141-8|AAK21480.1| 141|Caenorhabditis elegans Hypothetical ... 83 2e-16
Z81052-7|CAJ58492.1| 103|Caenorhabditis elegans Hypothetical pr... 83 3e-16
Z99942-5|CAI79198.1| 178|Caenorhabditis elegans Hypothetical pr... 48 5e-06
Z99942-4|CAB17069.1| 541|Caenorhabditis elegans Hypothetical pr... 48 5e-06
AL032654-5|CAD91715.2| 516|Caenorhabditis elegans Hypothetical ... 46 3e-05
AL032654-4|CAA21721.2| 552|Caenorhabditis elegans Hypothetical ... 46 3e-05
Z74038-3|CAA98498.2| 89|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z81038-3|CAB02759.1| 316|Caenorhabditis elegans Hypothetical pr... 34 0.12
U28409-2|AAN60501.1| 288|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical pr... 30 1.9
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 29 4.5
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 29 4.5
AL110484-27|CAI46626.1| 397|Caenorhabditis elegans Hypothetical... 28 7.8
>Z78539-6|CAB01732.2| 134|Caenorhabditis elegans Hypothetical
protein C31E10.7 protein.
Length = 134
Score = 101 bits (241), Expect = 7e-22
Identities = 59/128 (46%), Positives = 78/128 (60%), Gaps = 7/128 (5%)
Frame = +1
Query: 187 EMKLFTREELKSRSTRADAVLIIHNEVYDVTKFLLEHPGGEEVLLEKAGQDASEPFEDVS 366
++K T +E+ +T A L+I N+V+DVTKFL EHPGG EVLLE+AG D +E FEDV
Sbjct: 3 DLKQITLKEIAEHNTNKSAWLVIGNKVFDVTKFLDEHPGGCEVLLEQAGSDGTEAFEDVG 62
Query: 367 HSSDARSLMKKYKIGELVESDRVQTRAGFSPQW--TNEQAQEQGNWSSWLTP-----LLL 525
HS+DAR + +Y IGE+V S+R +T + QW T EQ +Q S T LL
Sbjct: 63 HSTDARHMKDEYLIGEVVASER-KTYSYDKKQWKSTTEQDNKQRGGESMQTDNIVYFALL 121
Query: 526 GVAATLLY 549
V L+Y
Sbjct: 122 AVIVALVY 129
>AF003141-8|AAK21480.1| 141|Caenorhabditis elegans Hypothetical
protein W02D3.1 protein.
Length = 141
Score = 83.0 bits (196), Expect = 2e-16
Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 10/115 (8%)
Frame = +1
Query: 247 LIIHNEVYDVTKFLLEHPGGEEVLLEKAGQDASEPFEDVSHSSDARSLMKKYKIGELVES 426
++I +VYDVTKFL EHPGGEEV+ + AG+DA+ F DV HS DA + +Y IG+L ES
Sbjct: 26 IVISGKVYDVTKFLNEHPGGEEVITQLAGKDATVGFLDVGHSKDAIEMANEYLIGQLPES 85
Query: 427 DRVQTRAGFSPQWTNEQAQEQGN----------WSSWLTPLLLGVAATLLYRYLF 561
D + + NE++ N W+++L P +G+ +Y+ +F
Sbjct: 86 DVPKVETAAAKPSKNEKSSSLLNDFTEIMTSPTWTNFLIPTTMGLVIYAVYKCMF 140
>Z81052-7|CAJ58492.1| 103|Caenorhabditis elegans Hypothetical
protein D2023.1b protein.
Length = 103
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/79 (49%), Positives = 52/79 (65%)
Frame = +1
Query: 196 LFTREELKSRSTRADAVLIIHNEVYDVTKFLLEHPGGEEVLLEKAGQDASEPFEDVSHSS 375
+ TR E+ + D +I+ N VYDVTKF+ HPGG E+LLE AG DA++ FE V HS
Sbjct: 5 IITRSEVNMHCSEDDCWIIVGNYVYDVTKFVDLHPGGPEILLEFAGGDATDAFESVGHSM 64
Query: 376 DARSLMKKYKIGELVESDR 432
AR ++ K+KIG L E +R
Sbjct: 65 CARMMLTKFKIGSLPEDER 83
>Z99942-5|CAI79198.1| 178|Caenorhabditis elegans Hypothetical
protein H13N06.4b protein.
Length = 178
Score = 48.4 bits (110), Expect = 5e-06
Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Frame = +1
Query: 190 MKLFTREELKSRSTRADAVLIIHNE-VYDVTKFLLEHPGGEEVLLEKAGQDASEPFEDV- 363
++++ +EE+K AD + + + + VYDVT F+ HPGG+++LL A A +PF +
Sbjct: 79 LQIYKQEEVKKHGKDADRIWVTYKDGVYDVTDFIAMHPGGDKILL--AAGAAVDPFWALY 136
Query: 364 -SH-SSDARSLMKKYKIGELVESD 429
H + + +++ Y+IG+L D
Sbjct: 137 SQHKTKEVLEILEGYRIGKLDVKD 160
>Z99942-4|CAB17069.1| 541|Caenorhabditis elegans Hypothetical
protein H13N06.4a protein.
Length = 541
Score = 48.4 bits (110), Expect = 5e-06
Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Frame = +1
Query: 190 MKLFTREELKSRSTRADAVLIIHNE-VYDVTKFLLEHPGGEEVLLEKAGQDASEPFEDV- 363
++++ +EE+K AD + + + + VYDVT F+ HPGG+++LL A A +PF +
Sbjct: 79 LQIYKQEEVKKHGKDADRIWVTYKDGVYDVTDFIAMHPGGDKILL--AAGAAVDPFWALY 136
Query: 364 -SH-SSDARSLMKKYKIGELVESD 429
H + + +++ Y+IG+L D
Sbjct: 137 SQHKTKEVLEILEGYRIGKLDVKD 160
>AL032654-5|CAD91715.2| 516|Caenorhabditis elegans Hypothetical
protein Y52B11A.3b protein.
Length = 516
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/70 (35%), Positives = 37/70 (52%)
Frame = +1
Query: 211 ELKSRSTRADAVLIIHNEVYDVTKFLLEHPGGEEVLLEKAGQDASEPFEDVSHSSDARSL 390
EL +T+ D + + VYDVTK+L HPGG LL AG+DA+ F + S+
Sbjct: 25 ELMKHNTKDDCWVHLFGIVYDVTKYLDFHPGGIPELLRGAGRDATPLFNQYHAWVNYESM 84
Query: 391 MKKYKIGELV 420
+K +G +
Sbjct: 85 LKACVVGPFI 94
>AL032654-4|CAA21721.2| 552|Caenorhabditis elegans Hypothetical
protein Y52B11A.3a protein.
Length = 552
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/70 (35%), Positives = 37/70 (52%)
Frame = +1
Query: 211 ELKSRSTRADAVLIIHNEVYDVTKFLLEHPGGEEVLLEKAGQDASEPFEDVSHSSDARSL 390
EL +T+ D + + VYDVTK+L HPGG LL AG+DA+ F + S+
Sbjct: 61 ELMKHNTKDDCWVHLFGIVYDVTKYLDFHPGGIPELLRGAGRDATPLFNQYHAWVNYESM 120
Query: 391 MKKYKIGELV 420
+K +G +
Sbjct: 121 LKACVVGPFI 130
>Z74038-3|CAA98498.2| 89|Caenorhabditis elegans Hypothetical
protein F58B4.2 protein.
Length = 89
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Frame = +1
Query: 181 EGEMKLFTREELKSRSTRADAVLIIHNEVYDVTKFLLEHPGGEEVLLEKAGQDASE--PF 354
E +K +TR +++ T D L+ ++VY++T + +HPGG +L AG+D + PF
Sbjct: 6 EDNLKEYTRSQVEQHCTHDDLWLLFRDKVYNMTPYFNQHPGG-LAILRYAGKDVTTVLPF 64
Query: 355 EDVSHS---SDARSLMKKYKIGELVE 423
VSH ++++ IG+L E
Sbjct: 65 V-VSHGIAWKIVEQKLQEHLIGKLKE 89
>Z81038-3|CAB02759.1| 316|Caenorhabditis elegans Hypothetical
protein C25A1.5 protein.
Length = 316
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Frame = +1
Query: 253 IHNEVYDVTKFLLEHPGGEEVLLEKAGQDASEPFEDV--------SHSSDARSLMKKYKI 408
+ + YD+ F +HPGG +VL AG++ E HS A +++++Y +
Sbjct: 15 LDGQYYDIADFAPKHPGGAKVLNRLAGEEIGEFIRGEKRIMGVRHEHSEAAYNMLERYNV 74
Query: 409 GELVESD-RVQTRAG 450
+ + D +++++G
Sbjct: 75 NAIQKGDPLIESKSG 89
>U28409-2|AAN60501.1| 288|Caenorhabditis elegans Hypothetical
protein T25D10.5 protein.
Length = 288
Score = 31.9 bits (69), Expect = 0.48
Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 4/107 (3%)
Frame = +1
Query: 157 FKLINIIMEGEMKLFTREELKSRSTRADAVLIIHNEVYDVTKFLLE-HPGGEEVLLE--- 324
FK E + T EEL S R DAVL+I V K LL H L
Sbjct: 104 FKYKIFYKESDYSGLTLEELFKPSERNDAVLVIGGTKMHVNKALLSFHSEYFRALFSSNF 163
Query: 325 KAGQDASEPFEDVSHSSDARSLMKKYKIGELVESDRVQTRAGFSPQW 465
K G+ P +VS+ +R L Y L++ D ++ + Q+
Sbjct: 164 KEGKLTEIPMYEVSYEDFSRMLAVLYGNEALLKDDNLEKMLELADQF 210
>Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical
protein ZK1098.1 protein.
Length = 724
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 157 FKLINIIMEGEMKLFTREELKSRSTRADAVLIIHNEVYDVTKFLLEHPGGEEVLLEKAGQ 336
F+++N + E + + + + R + L I D+ KFL EHP +E L +
Sbjct: 263 FRILNKVSEKKQLFNAWKVQRGKEERDEKRLAIKKSKEDLEKFLQEHPKMKESLKYQKAS 322
Query: 337 D--ASEPFEDVSHSSDARSLMK 396
D + EP + D + + +
Sbjct: 323 DIFSKEPLWIAVNDEDRKEIFR 344
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein 363,
isoform b protein.
Length = 2692
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 457 PQWTNEQAQEQGNWSSWLTPLLLG 528
PQW NE + W WL + +G
Sbjct: 1330 PQWKNENLTSKDEWLQWLMKIRIG 1353
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein 363,
isoform a protein.
Length = 2695
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 457 PQWTNEQAQEQGNWSSWLTPLLLG 528
PQW NE + W WL + +G
Sbjct: 1330 PQWKNENLTSKDEWLQWLMKIRIG 1353
>AL110484-27|CAI46626.1| 397|Caenorhabditis elegans Hypothetical
protein Y38E10A.28 protein.
Length = 397
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 185 PSIIMFINLN*ITTLPPICL*LQIY 111
PSI++F +N I LP ICL +Y
Sbjct: 328 PSILLFCPVNNILALPMICLAFYVY 352
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,254,709
Number of Sequences: 27780
Number of extensions: 255705
Number of successful extensions: 638
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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