Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_J03
         (757 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    27   0.47 
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           24   4.4  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   5.8  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   5.8  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   7.7  

>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 27.5 bits (58), Expect = 0.47
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +1

Query: 97  MSIFHSFPNLPGPEETAFCKLNEVYCCGNARYGNISTFSNATKKHPIINVTRD 255
           M+I H +    G +E  + KL  ++C     +G  ST +  +KKH +  V  D
Sbjct: 344 MNINHMYIATDG-QEVFYAKLGYIFCKAINIFGTRSTRNTVSKKHWMRKVLSD 395


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = +1

Query: 238 INVTRDLHHHRTSDENISMYIDVEDNLLKKITSV 339
           +++ +DL+ +       +MY  + D + K+ITS+
Sbjct: 288 VDIRKDLYANSVLSGGTTMYPGIADRMQKEITSL 321


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 740 PCSQPTASSEADRGLQFSDD 681
           P S+   SS  +RG++ SDD
Sbjct: 427 PSSETNGSSSQERGMESSDD 446


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 740 PCSQPTASSEADRGLQFSDD 681
           P S+   SS  +RG++ SDD
Sbjct: 427 PSSETNGSSSQERGMESSDD 446


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 196 NISTFSNATKKHPIINVTRDLHHHRTS 276
           N S+ SN      +IN   +LH+HR++
Sbjct: 892 NNSSSSNLVAAGMVINDENNLHYHRSA 918


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 760,653
Number of Sequences: 2352
Number of extensions: 14881
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)